Simultaneous refinement of inaccurate local regions and overall structure in the CASP12 protein model refinement experiment
出版年份 2017 全文链接
标题
Simultaneous refinement of inaccurate local regions and overall structure in the CASP12 protein model refinement experiment
作者
关键词
-
出版物
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume 86, Issue -, Pages 168-176
出版商
Wiley
发表日期
2017-10-17
DOI
10.1002/prot.25404
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Protein structure determination using metagenome sequence data
- (2017) Sergey Ovchinnikov et al. SCIENCE
- Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution
- (2016) Julian von der Ecken et al. NATURE
- Assessment of refinement of template-based models in CASP11
- (2016) Vivek Modi et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- 2.3 A resolution cryo-EM structure of human p97 and mechanism of allosteric inhibition
- (2016) S. Banerjee et al. SCIENCE
- Determining protein structures by combining semireliable data with atomistic physical models by Bayesian inference
- (2015) Justin L. MacCallum et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Protein structure refinement with adaptively restrained homologous replicas
- (2015) Dennis Della Corte et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- CASP11 refinement experiments with ROSETTA
- (2015) Hahnbeom Park et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins
- (2014) David T. Jones et al. BIOINFORMATICS
- Protein Loop Modeling Using a New Hybrid Energy Function and Its Application to Modeling in Inaccurate Structural Environments
- (2014) Hahnbeom Park et al. PLoS One
- Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information
- (2014) Sergey Ovchinnikov et al. eLife
- GalaxyRefine: protein structure refinement driven by side-chain repacking
- (2013) Lim Heo et al. NUCLEIC ACIDS RESEARCH
- CASP prediction center infrastructure and evaluation measures in CASP10 and CASP ROLL
- (2013) Andriy Kryshtafovych et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- One contact for every twelve residues allows robust and accurate topology-level protein structure modeling
- (2013) David E. Kim et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Physics-based protein structure refinement through multiple molecular dynamics trajectories and structure averaging
- (2013) Vahid Mirjalili et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Evaluation of predictions in the CASP10 model refinement category
- (2013) Timothy Nugent et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions
- (2012) Junsu Ko et al. BMC BIOINFORMATICS
- Protein Structure Refinement through Structure Selection and Averaging from Molecular Dynamics Ensembles
- (2012) Vahid Mirjalili et al. Journal of Chemical Theory and Computation
- ProDy: Protein Dynamics Inferred from Theory and Experiments
- (2011) A. Bakan et al. BIOINFORMATICS
- Generalized Fragment Picking in Rosetta: Design, Protocols and Applications
- (2011) Dominik Gront et al. PLoS One
- Protein 3D Structure Computed from Evolutionary Sequence Variation
- (2011) Debora S. Marks et al. PLoS One
- Evaluation of model quality predictions in CASP9
- (2011) Andriy Kryshtafovych et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Assessment of protein structure refinement in CASP9
- (2011) Justin L. MacCallum et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Protein loop modeling by using fragment assembly and analytical loop closure
- (2010) Julian Lee et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- MolProbity: all-atom structure validation for macromolecular crystallography
- (2009) Vincent B. Chen et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Specific interactions for ab initio folding of protein terminal regions with secondary structures
- (2008) Yuedong Yang et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- FACTS: Fast analytical continuum treatment of solvation
- (2007) Urs Haberthür et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
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