The genomics of recovery from coral bleaching

Expanding the Symbiodinium (Dinophyceae, Suessiales) Toolkit Through Protoplast Technology

(2017) Rachel A. Levin et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Global warming and recurrent mass bleaching of corals

(2017) Terry P. Hughes et al.   NATURE

Coral reefs in the Anthropocene

(2017) Terry P. Hughes et al.   NATURE

Tidal heat pulses on a reef trigger a fine-tuned transcriptional response in corals to maintain homeostasis

(2017) Lupita J. Ruiz-Jones et al.   Science Advances

Can heterotrophic uptake of dissolved organic carbon and zooplankton mitigate carbon budget deficits in annually bleached corals?

(2015) Stephen Levas et al.   CORAL REEFS

Rapid Acclimation Ability Mediated by Transcriptome Changes in Reef-Building Corals

(2015) Rachael A. Bay et al.   Genome Biology and Evolution

Gene Networks in the Wild: Identifying Transcriptional Modules that Mediate Coral Resistance to Experimental Heat Stress

(2015) Noah H. Rose et al.   Genome Biology and Evolution

The role of transcriptome resilience in resistance of corals to bleaching

(2015) Francois O. Seneca et al.   MOLECULAR ECOLOGY

The genome ofAiptasia, a sea anemone model for coral symbiosis

(2015) Sebastian Baumgarten et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Annual coral bleaching and the long-term recovery capacity of coral

(2015) Verena Schoepf et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral

(2015) J. H. Pinzon et al.   Royal Society Open Science

Rapid, Precise, and Accurate Counts of Symbiodinium Cells Using the Guava Flow Cytometer, and a Comparison to Other Methods

(2015) Cory J. Krediet et al.   PLoS One

The cumulative impact of annual coral bleaching can turn some coral species winners into losers

(2014) Andréa G. Grottoli et al.   GLOBAL CHANGE BIOLOGY

Mechanisms of reef coral resistance to future climate change

(2014) S. R. Palumbi et al.   SCIENCE

Systems genetics approaches to understand complex traits

(2013) Mete Civelek et al.   NATURE REVIEWS GENETICS

Positive Outcomes Influence the Rate and Time to Publication, but Not the Impact Factor of Publications of Clinical Trial Results

(2013) Pilar Suñé et al.   PLoS One

Physiological and Biogeochemical Traits of Bleaching and Recovery in the Mounding Species of Coral Porites lobata: Implications for Resilience in Mounding Corals

(2013) Stephen J. Levas et al.   PLoS One

Genomic basis for coral resilience to climate change

(2013) Daniel J. Barshis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bleaching, coral mortality and subsequent survivorship on a West Australian fringing reef

(2012) M. Depczynski et al.   CORAL REEFS

Extensive sympatry, cryptic diversity and introgression throughout the geographic distribution of two coral species complexes

(2012) JASON T. LADNER et al.   MOLECULAR ECOLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Bleached Porites compressa and Montipora capitata corals catabolize δ13C-enriched lipids

(2011) Andréa G. Grottoli et al.   CORAL REEFS

Transcriptomic resilience to global warming in the seagrass Zostera marina, a marine foundation species

(2011) S. U. Franssen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Resistance to thermal stress in corals without changes in symbiont composition

(2011) A. J. Bellantuono et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Many corals host thermally resistant symbionts in high-temperature habitat

(2010) T. A. Oliver et al.   CORAL REEFS

The dynamic genome of Hydra

(2010) Jarrod A. Chapman et al.   NATURE

The Activity of a Wall-Bound Cellulase Is Required for and Is Coupled to Cell Cycle Progression in the DinoflagellateCrypthecodinium cohnii

(2010) Alvin C.M. Kwok et al.   PLANT CELL

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Energetics approach to predicting mortality risk from environmental stress: a case study of coral bleaching

(2009) Kenneth R. N. Anthony et al.   FUNCTIONAL ECOLOGY

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

A community change in the algal endosymbionts of a scleractinian coral following a natural bleaching event: field evidence of acclimatization

(2008) A.M Jones et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Environmental versus Genetic Influences on Growth Rates of the Corals Pocillopora eydouxi and Porites lobata (Anthozoa: Scleractinia)1

(2007) L. W. Smith et al.   PACIFIC SCIENCE