Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral

Study of Cnidarian-Algal Symbiosis in the “Omics” Age

(2016) Eli Meyer et al.   BIOLOGICAL BULLETIN

The reef coral Goniastrea aspera: a ‘winner’ becomes a ‘loser’ during a severe bleaching event in Thailand

(2014) B. E. Brown et al.   CORAL REEFS

Mass Coral Bleaching in 2010 in the Southern Caribbean

(2014) Jahson Berhane Alemu I et al.   PLoS One

Draft Assembly of the Symbiodinium minutum Nuclear Genome Reveals Dinoflagellate Gene Structure

(2013) Eiichi Shoguchi et al.   CURRENT BIOLOGY

Microbial functional genes associated with coral health and disease

(2013) ZA Pratte   DISEASES OF AQUATIC ORGANISMS

How do disturbances and environmental heterogeneity affect the pace of forest distribution shifts under climate change?

(2013) Mark C. Vanderwel et al.   ECOGRAPHY

The response of the scleractinian coral Turbinaria reniformis to thermal stress depends on the nitrogen status of the coral holobiont

(2013) E. Beraud et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

A coral bleaching model

(2013) Peter L. Antonelli et al.   NONLINEAR ANALYSIS-REAL WORLD APPLICATIONS

Genes Related to Ion-Transport and Energy Production Are Upregulated in Response to CO2-Driven pH Decrease in Corals: New Insights from Transcriptome Analysis

(2013) Jeremie Vidal-Dupiol et al.   PLoS One

Responses to High Seawater Temperatures in Zooxanthellate Octocorals

(2013) Paul W. Sammarco et al.   PLoS One

RNA-seq Profiles of Immune Related Genes in the Staghorn Coral Acropora cervicornis Infected with White Band Disease

(2013) Silvia Libro et al.   PLoS One

Genomic basis for coral resilience to climate change

(2013) Daniel J. Barshis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coral-associated micro-organisms and their roles in promoting coral health and thwarting diseases

(2013) C. J. Krediet et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Variations in Reactive Oxygen Release and Antioxidant Activity in Multiple Symbiodinium Types in Response to Elevated Temperature

(2012) Elizabeth S. McGinty et al.   MICROBIAL ECOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

(2012) M. Lohse et al.   NUCLEIC ACIDS RESEARCH

Symbiodinium Transcriptomes: Genome Insights into the Dinoflagellate Symbionts of Reef-Building Corals

(2012) Till Bayer et al.   PLoS One

Revised mechanism of complement lectin-pathway activation revealing the role of serine protease MASP-1 as the exclusive activator of MASP-2

(2012) D. Heja et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals

(2012) H. M. Putnam et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Towards an integrated network of coral immune mechanisms

(2012) C. V. Palmer et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The presence of multiple phenoloxidases in Caribbean reef-building corals

(2011) Laura D. Mydlarz et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Do fluctuating temperature environments elevate coral thermal tolerance?

(2011) T. A. Oliver et al.   CORAL REEFS

Innate Immune Responses of a Scleractinian Coral to Vibriosis

(2011) Jeremie Vidal-Dupiol et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Physiological responses of the scleractinian coral Pocillopora damicornis to bacterial stress from Vibrio coralliilyticus

(2011) J. Vidal-Dupiol et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Patterns of coral ecological immunology: variation in the responses of Caribbean corals to elevated temperature and a pathogen elicitor

(2011) C. V. Palmer et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Elevated temperature impairs onset of symbiosis and reduces survivorship in larvae of the Hawaiian coral, Fungia scutaria

(2011) C. E. Schnitzler et al.   MARINE BIOLOGY

Quantifying Ostreid Herpesvirus (OsHV-1) Genome Copies and Expression during Transmission

(2011) Colleen A. Burge et al.   MICROBIAL ECOLOGY

Present Limits to Heat-Adaptability in Corals and Population-Level Responses to Climate Extremes

(2011) Bernhard M. Riegl et al.   PLoS One

A Connection between Colony Biomass and Death in Caribbean Reef-Building Corals

(2011) Daniel J. Thornhill et al.   PLoS One

Differential Responses of the Coral Host and Their Algal Symbiont to Thermal Stress

(2011) William Leggat et al.   PLoS One

Resistance to thermal stress in corals without changes in symbiont composition

(2011) A. J. Bellantuono et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Levels of immunity parameters underpin bleaching and disease susceptibility of reef corals

(2010) Caroline V. Palmer et al.   FASEB JOURNAL

The Impact of Climate Change on the World's Marine Ecosystems

(2010) O. Hoegh-Guldberg et al.   SCIENCE

Elevated temperature reduces survivorship and settlement of the larvae of the Caribbean scleractinian coral, Favia fragum (Esper)

(2009) C. J. Randall et al.   CORAL REEFS

Changes in Caribbean coral disease prevalence after the 2005 bleaching event

(2009) A Cróquer et al.   DISEASES OF AQUATIC ORGANISMS

Immune defenses of healthy, bleached and diseased Montastraea faveolata during a natural bleaching event

(2009) LD Mydlarz et al.   DISEASES OF AQUATIC ORGANISMS

Disease incidence is related to bleaching extent in reef-building corals

(2009) Marilyn E. Brandt et al.   ECOLOGY

Distributions of stress-resistant coral symbionts match environmental patterns at local but not regional scales

(2009) TA Oliver et al.   MARINE ECOLOGY PROGRESS SERIES

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Presenting and exploring biological pathways with PathVisio

(2008) Martijn P van Iersel et al.   BMC BIOINFORMATICS

Apoptosis as a post-phagocytic winnowing mechanism in a coral-dinoflagellate mutualism

(2008) Simon R. Dunn et al.   ENVIRONMENTAL MICROBIOLOGY

Cellular mechanisms of Cnidarian bleaching: stress causes the collapse of symbiosis

(2008) V. M. Weis   JOURNAL OF EXPERIMENTAL BIOLOGY

Early cellular changes are indicators of pre-bleaching thermal stress in the coral host

(2008) T.D. Ainsworth et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

PID: the Pathway Interaction Database

(2008) Carl F. Schaefer et al.   NUCLEIC ACIDS RESEARCH

Coral bleaching: the role of the host

(2008) Andrew H. Baird et al.   TRENDS IN ECOLOGY & EVOLUTION