Identification of novel miRNAs and miRNA expression profiling in embryogenic tissues of Picea balfouriana treated by 6-benzylaminopurine

Genomewide analysis of small RNAs in nonembryogenic and embryogenic tissues of citrus: microRNA-and siRNA-mediated transcript cleavage involved in somatic embryogenesis

(2015) Xiao-Meng Wu et al.   PLANT BIOTECHNOLOGY JOURNAL

Changes in the Metabolome of Picea balfouriana Embryogenic Tissues That Were Linked to Different Levels of 6-BAP by Gas Chromatography-Mass Spectrometry Approach

(2015) Q. F. Li et al.   PLoS One

Transcriptomic and proteomic analyses of embryogenic tissues inPicea balfourianatreated with 6-benzylaminopurine

(2014) Qingfen Li et al.   PHYSIOLOGIA PLANTARUM

Differential expression of microRNAs in dormant bud of tea [Camellia sinensis (L.) O. Kuntze]

(2014) Anburaj Jeyaraj et al.   PLANT CELL REPORTS

Identification of the Hevea brasiliensis AP2/ERF superfamily by RNA sequencing

(2013) Cuifang Duan et al.   BMC GENOMICS

Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis

(2013) Xiyan Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Early Embryogenesis in Flowering Plants: Setting Up the Basic Body Pattern

(2012) Steffen Lau et al.   Annual Review of Plant Biology

Some ethylene biosynthesis and AP2/ERF genes reveal a specific pattern of expression during somatic embryogenesis in Hevea brasiliensis

(2012) Piyanuch Piyatrakul et al.   BMC PLANT BIOLOGY

Selection and validation of suitable reference genes for miRNA expression normalization by quantitative RT-PCR in citrus somatic embryogenic and adult tissues

(2012) Shu-Jun Kou et al.   PLANT CELL REPORTS

Regulation of LaMYB33 by miR159 during maintenance of embryogenic potential and somatic embryo maturation in Larix kaempferi (Lamb.) Carr.

(2012) Wan-Feng Li et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Transcriptional profiling of genes involved in embryogenic, non-embryogenic calluses and somatic embryogenesis of Valencia sweet orange by SSH-based microarray

(2012) Xiao-Xia Ge et al.   PLANTA

Genome-wide identification of microRNAs in larch and stage-specific modulation of 11 conserved microRNAs and their targets during somatic embryogenesis

(2012) Junhong Zhang et al.   PLANTA

Deep Sequencing and Microarray Hybridization Identify Conserved and Species-Specific MicroRNAs during Somatic Embryogenesis in Hybrid Yellow Poplar

(2012) Tingting Li et al.   PLoS One

Four abiotic stress-induced miRNA families differentially regulated in the embryogenic and non-embryogenic callus tissues of Larix leptolepis

(2010) Shougong Zhang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Prediction of novel miRNAs and associated target genes in Glycine max

(2010) Trupti Joshi et al.   BMC BIOINFORMATICS

Deep sequencing discovery of novel and conserved microRNAs in trifoliate orange (Citrus trifoliata)

(2010) Changnian Song et al.   BMC GENOMICS

Validation of reference genes for gene expression analysis in chicory (Cichorium intybus) using quantitative real-time PCR

(2010) Asad Maroufi et al.   BMC MOLECULAR BIOLOGY

Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)

(2010) Chuan-Zhi Zhao et al.   BMC PLANT BIOLOGY

Computational analysis of miRNA targets in plants: current status and challenges

(2010) X. Dai et al.   BRIEFINGS IN BIOINFORMATICS

Regulation of Somatic Embryogenesis in Higher Plants

(2010) Xiyan Yang et al.   CRITICAL REVIEWS IN PLANT SCIENCES

DNA Methylation Mediated by a MicroRNA Pathway

(2010) Liang Wu et al.   MOLECULAR CELL

Characterization of a ZmSERK gene and its relationship to somatic embryogenesis in a maize culture

(2010) Suzhi Zhang et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Control of somatic embryogenesis and embryo development by AP2 transcription factors

(2010) Souad El Ouakfaoui et al.   PLANT MOLECULAR BIOLOGY

Arabidopsis EMBRYOMAKER encoding an AP2 domain transcription factor plays a key role in developmental change from vegetative to embryonic phase

(2010) Ryo Tsuwamoto et al.   PLANT MOLECULAR BIOLOGY

The MicroRNA159-Regulated GAMYB-like Genes Inhibit Growth and Promote Programmed Cell Death in Arabidopsis

(2010) M. M. Alonso-Peral et al.   PLANT PHYSIOLOGY

Identification of suitable reference genes for normalization of qPCR data in comparative transcriptomics analyses in the Triticeae

(2010) María J. Giménez et al.   PLANTA

Stage and tissue-specific modulation of ten conserved miRNAs and their targets during somatic embryogenesis of Valencia sweet orange

(2010) Xiao-Meng Wu et al.   PLANTA

Identification of miRNA from Porphyra yezoensis by High-Throughput Sequencing and Bioinformatics Analysis

(2010) Chengwei Liang et al.   PLoS One

Computational Identification of miRNAs and Their Target Genes from Expressed Sequence Tags of Tea (Camellia sinensis)

(2010) G.R. Prabu et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

High throughput sequencing technology reveals that the taxoid elicitor methyl jasmonate regulates microRNA expression in Chinese yew (Taxus chinensis)

(2009) Deyou Qiu et al.   GENE

Expression of the SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE1 (SERK1) gene is associated with developmental change in the life cycle of the model legume Medicago truncatula

(2009) K. E. Nolan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Small silencing RNAs: an expanding universe

(2009) Megha Ghildiyal et al.   NATURE REVIEWS GENETICS

LEAFY COTYLEDON2 gene expression and auxin treatment in relation to embryogenic capacity of Arabidopsis somatic cells

(2009) Agnieszka Ledwoń et al.   PLANT CELL REPORTS

High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families

(2008) Gyorgy Szittya et al.   BMC GENOMICS

Identification of suitable endogenous control genes for microRNA gene expression analysis in human breast cancer

(2008) Pamela A Davoren et al.   BMC MOLECULAR BIOLOGY

Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

(2008) S. Moxon et al.   GENOME RESEARCH

Evidence for stage-specific modulation of specific microRNAs (miRNAs) and miRNA processing components in zygotic embryo and female gametophyte of loblolly pine (Pinus taeda)

(2008) Thomas J. Oh et al.   NEW PHYTOLOGIST

Molecular regulation of somatic embryogenesis in potato: an auxin led perspective

(2008) Sanjeev Kumar Sharma et al.   PLANT MOLECULAR BIOLOGY

An Abscisic Acid-Induced Protein, HVA22, Inhibits Gibberellin-Mediated Programmed Cell Death in Cereal Aleurone Cells

(2008) W.-J. Guo et al.   PLANT PHYSIOLOGY