Identification of the Hevea brasiliensis AP2/ERF superfamily by RNA sequencing

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)

(2012) Dejun Li et al.   BMC GENOMICS

Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene

(2012) Julien Pirrello et al.   BMC PLANT BIOLOGY

Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera

(2011) Francesco Licausi et al.   BMC GENOMICS

De novo assembly and transcriptome analysis of five major tissues of Jatropha curcas L. using GS FLX titanium platform of 454 pyrosequencing

(2011) Purushothaman Natarajan et al.   BMC GENOMICS

Transcriptome Sequencing of Hevea brasiliensis for Development of Microsatellite Markers and Construction of a Genetic Linkage Map

(2011) K. Triwitayakorn et al.   DNA RESEARCH

Metabolic routes affecting rubber biosynthesis in Hevea brasiliensis latex

(2011) Keng-See Chow et al.   JOURNAL OF EXPERIMENTAL BOTANY

RNA-Seq analysis and de novo transcriptome assembly of Hevea brasiliensis

(2011) Zhihui Xia et al.   PLANT MOLECULAR BIOLOGY

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

(2011) Julie D. Thompson et al.   PLoS One

MicroRNA networks and developmental plasticity in plants

(2011) Ignacio Rubio-Somoza et al.   TRENDS IN PLANT SCIENCE

Identification and characterization of genes associated with tapping panel dryness from Hevea brasiliensis latex using suppression subtractive hybridization

(2010) Dejun Li et al.   BMC PLANT BIOLOGY

The RAV1 transcription factor positively regulates leaf senescence in Arabidopsis

(2010) Hye Ryun Woo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Hormonal treatment of the bark of rubber trees (Hevea brasiliensis) increases latex yield through latex dilution in relation with the differential expression of two aquaporin genes

(2010) Kessarin Tungngoen et al.   JOURNAL OF PLANT PHYSIOLOGY

Discovery and expression profile analysis of AP2/ERF family genes from Triticum aestivum

(2010) Jing Zhuang et al.   MOLECULAR BIOLOGY REPORTS

Identification, phylogeny, and transcript profiling of ERF family genes during development and abiotic stress treatments in tomato

(2010) Manoj K. Sharma et al.   MOLECULAR GENETICS AND GENOMICS

The sucrose transporter HbSUT3 plays an active role in sucrose loading to laticifer and rubber productivity in exploited trees of Hevea brasiliensis (para rubber tree)

(2010) CHAORONG TANG et al.   PLANT CELL AND ENVIRONMENT

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Gene expression pattern in response to wounding, methyl jasmonate and ethylene in the bark of Hevea brasiliensis

(2010) C. Duan et al.   TREE PHYSIOLOGY

Ethylene stimulation of latex yield depends on the expression of a sucrose transporter (HbSUT1B) in rubber tree (Hevea brasiliensis)

(2010) A. Dusotoit-Coucaud et al.   TREE PHYSIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Sucrose importation into laticifers of Hevea brasiliensis, in relation to ethylene stimulation of latex production

(2009) Anaïs Dusotoit-Coucaud et al.   ANNALS OF BOTANY

FrameDP: sensitive peptide detection on noisy matured sequences

(2009) J. Gouzy et al.   BIOINFORMATICS

DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis

(2009) Tomokazu Tsutsui et al.   JOURNAL OF PLANT RESEARCH

Molecular diversity and gene expression of cotton ERF transcription factors reveal that group IXa members are responsive to jasmonate, ethylene andXanthomonas

(2009) ANTONY CHAMPION et al.   MOLECULAR PLANT PATHOLOGY

Involvement of HbPIP2;1 and HbTIP1;1 Aquaporins in Ethylene Stimulation of Latex Yield through Regulation of Water Exchanges between Inner Liber and Latex Cells in Hevea brasiliensis

(2009) K. Tungngoen et al.   PLANT PHYSIOLOGY

Water deficit affects mesophyll limitation of leaves more strongly in sun than in shade in two contrasting Picea asperata populations

(2009) B. Duan et al.   TREE PHYSIOLOGY

Genome-wide analysis of the AP2/ERF gene family in Populus trichocarpa

(2008) Jing Zhuang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under various conditions

(2008) Xavier Argout et al.   BMC GENOMICS

Molecular Identification and Characterization of a Gene Associated with the Onset of Tapping Panel Dryness (TPD) Syndrome in Rubber Tree (Hevea brasiliensis Muell.) by mRNA Differential Display

(2008) Perumal Venkatachalam et al.   MOLECULAR BIOTECHNOLOGY

Characterization of the TaAIDFa gene encoding a CRT/DRE-binding factor responsive to drought, high-salt, and cold stress in wheat

(2008) Zhao-Shi Xu et al.   MOLECULAR GENETICS AND GENOMICS

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

The AP2/ERF Domain Transcription Factor ORA59 Integrates Jasmonic Acid and Ethylene Signals in Plant Defense

(2008) M. Pre et al.   PLANT PHYSIOLOGY