Quantitative trait loci from identification to exploitation for crop improvement

Marker assisted pyramiding of drought yield QTLs into a popular Malaysian rice cultivar, MR219

(2016) Noraziyah Abd Aziz Shamsudin et al.   BMC GENETICS

Development and Genetic Characterization of an Advanced Backcross-Nested Association Mapping (AB-NAM) Population of Wild x Cultivated Barley

(2016) L. M. Nice et al.   GENETICS

Genome-wide identification of SNPs and copy number variation in common bean (Phaseolus vulgaris L.) using genotyping-by-sequencing (GBS)

(2016) Andrea Ariani et al.   MOLECULAR BREEDING

Dissecting quantitative trait variation in the resequencing era: complementarity of bi-parental, multi-parental and association panels

(2016) Laura Pascual et al.   PLANT SCIENCE

Yield QTLome distribution correlates with gene density in maize

(2016) Ana Karine Martinez et al.   PLANT SCIENCE

Characterization and Functional Analysis of PEBP Family Genes in Upland Cotton (Gossypium hirsutum L.)

(2016) Xiaohong Zhang et al.   PLoS One

Conventional and molecular marker-assisted selection and pyramiding of genes for multiple disease resistance in tomato

(2016) Peter Hanson et al.   SCIENTIA HORTICULTURAE

Characterization of Three Rice Multiparent Advanced Generation Intercross (MAGIC) Populations for Quantitative Trait Loci Identification

(2016) Lijun Meng et al.   Plant Genome

Functional Characterization of Novel Chitinase Genes Present in the Sheath Blight Resistance QTL: qSBR11-1 in Rice Line Tetep

(2016) Kamboj Richa et al.   Frontiers in Plant Science

Linkages and Interactions Analysis of Major Effect Drought Grain Yield QTLs in Rice

(2016) Prashant Vikram et al.   PLoS One

Yield-related salinity tolerance traits identified in a nested association mapping (NAM) population of wild barley

(2016) Stephanie Saade et al.   Scientific Reports

Association mapping of cane weight and tillers per plant in sugarcane

(2015) Muhammad Bilal et al.   BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT

Modelling the genetic architecture of flowering time control in barley through nested association mapping

(2015) Andreas Maurer et al.   BMC GENOMICS

Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing

(2015) Doori Park et al.   BMC GENOMICS

Genome-wide association analysis of seedling root development in maize (Zea mays L.)

(2015) Jordon Pace et al.   BMC GENOMICS

Association mapping of North American spring wheat breeding germplasm reveals loci conferring resistance to Ug99 and other African stem rust races

(2015) P. Bajgain et al.   BMC PLANT BIOLOGY

The crop QTLome comes of age

(2015) Silvio Salvi et al.   CURRENT OPINION IN BIOTECHNOLOGY

Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea

(2015) S. Das et al.   DNA RESEARCH

Genome-wide association mapping of salinity tolerance in rice (Oryza sativa)

(2015) V. Kumar et al.   DNA RESEARCH

Verification and evaluation of grain QTLs using RILs from TD70 x Kasalath in rice

(2015) Y.D. Zhang et al.   GENETICS AND MOLECULAR RESEARCH

Genome-wide association mapping of agronomic traits and carbon isotope discrimination in a worldwide germplasm collection of spring wheat using SNP markers

(2015) Freddy Mora et al.   MOLECULAR BREEDING

Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population

(2015) Weiwei Wen et al.   PLANT CELL

Genome-Wide Association of Carbon and Nitrogen Metabolism in the Maize Nested Association Mapping Population

(2015) Nengyi Zhang et al.   PLANT PHYSIOLOGY

Candidate gene association mapping for winter survival and spring regrowth in perennial ryegrass

(2015) Xiaoqing Yu et al.   PLANT SCIENCE

Genomic Dissection of Leaf Angle in Maize (Zea mays L.) Using a Four-Way Cross Mapping Population

(2015) Junqiang Ding et al.   PLoS One

Construction of an SSR and RAD-Marker Based Molecular Linkage Map of Vigna vexillata (L.) A. Rich

(2015) Rusama Marubodee et al.   PLoS One

Genome-wide association study of phosphorus-deficiency-tolerance traits in Aegilops tauschii

(2015) Yaxi Liu et al.   THEORETICAL AND APPLIED GENETICS

MAGIC populations in crops: current status and future prospects

(2015) B. Emma Huang et al.   THEORETICAL AND APPLIED GENETICS

QTL mapping of cucumber fruit flesh thickness by SLAF-seq

(2015) Xuewen Xu et al.   Scientific Reports

Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.)

(2015) Sandip M Kale et al.   Scientific Reports

Genome-Wide Association Mapping for Tomato Volatiles Positively Contributing to Tomato Flavor

(2015) Jing Zhang et al.   Frontiers in Plant Science

Identification of Putative Candidate Genes for Water Stress Tolerance in Canola (Brassica napus)

(2015) Jing Zhang et al.   Frontiers in Plant Science

Genome-wide association mapping unravels the genetic control of seed germination and vigor in Brassica napus

(2015) Sarah V. Hatzig et al.   Frontiers in Plant Science

Genome-Wide Linkage Mapping of QTL for Yield Components, Plant Height and Yield-Related Physiological Traits in the Chinese Wheat Cross Zhou 8425B/Chinese Spring

(2015) Fengmei Gao et al.   Frontiers in Plant Science

Transcriptomic analysis of wheat near-isogenic lines identifies PM19-A1 and A2 as candidates for a major dormancy QTL

(2015) Jose M. Barrero et al.   GENOME BIOLOGY

Identification of Candidate Genes for Seed Glucosinolate Content Using Association Mapping in Brassica napus L.

(2015) Cun-Min Qu et al.   Genes

Population structure and association mapping studies for important agronomic traits in soybean

(2015) BHUPENDER KUMAR et al.   JOURNAL OF GENETICS

Genome-Wide Association Mapping for Yield and Other Agronomic Traits in an Elite Breeding Population of Tropical Rice (Oryza sativa)

(2015) Hasina Begum et al.   PLoS One

Carotenoid Content and Root Color of Cultivated Carrot: A Candidate-Gene Association Study Using an Original Broad Unstructured Population

(2015) Matthieu Jourdan et al.   PLoS One

Molecular Mapping of Restriction-Site Associated DNA Markers in Allotetraploid Upland Cotton

(2015) Yangkun Wang et al.   PLoS One

Drought susceptibility of modern rice varieties: an effect of linkage of drought tolerance with undesirable traits

(2015) Prashant Vikram et al.   Scientific Reports

IsoMS: Automated Processing of LC-MS Data Generated by a Chemical Isotope Labeling Metabolomics Platform

(2014) Ruokun Zhou et al.   ANALYTICAL CHEMISTRY

A genome-wide association study of seed protein and oil content in soybean

(2014) Eun-Young Hwang et al.   BMC GENOMICS

Prioritization of candidate genes in QTL regions based on associations between traits and biological processes

(2014) Joachim W Bargsten et al.   BMC PLANT BIOLOGY

Genome-Wide Association Study Dissects the Genetic Architecture of Seed Weight and Seed Quality in Rapeseed (Brassica napus L.)

(2014) F. Li et al.   DNA RESEARCH

Modular Skeletal Evolution in Sticklebacks Is Controlled by Additive and Clustered Quantitative Trait Loci

(2014) Craig T. Miller et al.   GENETICS

An expression quantitative trait loci-guided co-expression analysis for constructing regulatory network using a rice recombinant inbred line population

(2014) Jia Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Drought adaptation of stay-green sorghum is associated with canopy development, leaf anatomy, root growth, and water uptake

(2014) Andrew K. Borrell et al.   JOURNAL OF EXPERIMENTAL BOTANY

Molecular basis of adaptation to high soil boron in wheat landraces and elite cultivars

(2014) Margaret Pallotta et al.   NATURE

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

(2014) Muhua Wang et al.   NATURE GENETICS

Potential of a tomato MAGIC population to decipher the genetic control of quantitative traits and detect causal variants in the resequencing era

(2014) Laura Pascual et al.   PLANT BIOTECHNOLOGY JOURNAL

Efficient Genome-Wide Detection and Cataloging of EMS-Induced Mutations Using Exome Capture and Next-Generation Sequencing

(2014) I. M. Henry et al.   PLANT CELL

Genome-wide association mapping and biochemical markers reveal that seed ageing and longevity are intricately affected by genetic background and developmental and environmental conditions in barley

(2014) MANUELA NAGEL et al.   PLANT CELL AND ENVIRONMENT

Genetic Dissection of Leaf Development in Brassica rapa Using a Genetical Genomics Approach

(2014) D. Xiao et al.   PLANT PHYSIOLOGY

Association Mapping Provides Insights into the Origin and the Fine Structure of the Sorghum Aluminum Tolerance Locus, AltSB

(2014) Fernanda F. Caniato et al.   PLoS One

Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches

(2014) Mahendar Thudi et al.   PLoS One

Association Mapping for Important Agronomic Traits in Core Collection of Rice (Oryza sativa L.) with SSR Markers

(2014) Peng Zhang et al.   PLoS One

A first step toward the development of a barley NAM population and its utilization to detect QTLs conferring leaf rust seedling resistance

(2014) Florian Schnaithmann et al.   THEORETICAL AND APPLIED GENETICS

Association mapping of brassinosteroid candidate genes and plant architecture in a diverse panel of Sorghum bicolor

(2014) Maria B. Mantilla Perez et al.   THEORETICAL AND APPLIED GENETICS

Identification of Yr59 conferring high-temperature adult-plant resistance to stripe rust in wheat germplasm PI 178759

(2014) X. L. Zhou et al.   THEORETICAL AND APPLIED GENETICS

Marker-assisted breeding of Indonesia local rice variety Siputeh for semi-dwarf phonetype, good grain quality and disease resistance to bacterial blight

(2014) Yanchang Luo et al.   Rice

OsAAP6 functions as an important regulator of grain protein content and nutritional quality in rice

(2014) Bo Peng et al.   Nature Communications

Past and present activities and future strategy of bryophyte conservation

(2014) T. Hallingback et al.   Phytotaxa

Genotype × Environment Interactions for Agronomic Traits of Rice Revealed by Association Mapping

(2014) Fei-fei XU et al.   Rice Science

The million mutation project: A new approach to genetics in Caenorhabditis elegans

(2013) O. Thompson et al.   GENOME RESEARCH

Association of candidate genes with drought tolerance traits in diverse perennial ryegrass accessions

(2013) Xiaoqing Yu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation

(2013) Jizeng Jia et al.   NATURE

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions

(2013) Yusaku Uga et al.   NATURE GENETICS

The Genetic Architecture of Maize Stalk Strength

(2013) Jason A. Peiffer et al.   PLoS One

Identification of Wheat Gene Sr35 That Confers Resistance to Ug99 Stem Rust Race Group

(2013) C. Saintenac et al.   SCIENCE

The Gene Sr33, an Ortholog of Barley Mla Genes, Encodes Resistance to Wheat Stem Rust Race Ug99

(2013) S. Periyannan et al.   SCIENCE

Applications of next-generation sequencing in plant biology

(2012) Ashley N. Egan et al.   AMERICAN JOURNAL OF BOTANY

An effective framework for reconstructing gene regulatory networks from genetical genomics data

(2012) R. J. Flassig et al.   BIOINFORMATICS

GAPIT: genome association and prediction integrated tool

(2012) Alexander E. Lipka et al.   BIOINFORMATICS

Constitutive expression of the Corngrass1 microRNA in poplar affects plant architecture and stem lignin content and composition

(2012) Peter M. Rubinelli et al.   BIOMASS & BIOENERGY

Sequence based polymorphic (SBP) marker technology for targeted genomic regions: its application in generating a molecular map of the Arabidopsis thaliana genome

(2012) Binod B Sahu et al.   BMC GENOMICS

SSR markers in transcripts of genes linked to post-transcriptional and transcriptional regulatory functions during vegetative and reproductive development of Elaeis guineensis

(2012) Timothy Tranbarger et al.   BMC PLANT BIOLOGY

QTL analysis reveals the genetic architecture of domestication traits in Crisphead lettuce

(2012) Yorike Hartman et al.   GENETIC RESOURCES AND CROP EVOLUTION

The use of weighted multiple linear regression to estimate QTL-by-QTL epistatic effects

(2012) Jan Bocianowski   GENETICS AND MOLECULAR BIOLOGY

A Pyramid Breeding of Eight Grain-yield Related Quantitative Trait Loci Based on Marker-assistant and Phenotype Selection in Rice (Oryza sativa L.)

(2012) Guo Zong et al.   Journal of Genetics and Genomics

A comparison of two methods to estimate additive-by-additive interaction of QTL effects by a simulation study

(2012) Jan Bocianowski   JOURNAL OF THEORETICAL BIOLOGY

Identification and mapping of leaf, stem and stripe rust resistance quantitative trait loci and their interactions in durum wheat

(2012) A. Singh et al.   MOLECULAR BREEDING

The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency

(2012) Rico Gamuyao et al.   NATURE

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

(2012) Hui Li et al.   NATURE GENETICS

The draft genome of a diploid cotton Gossypium raimondii

(2012) Kunbo Wang et al.   NATURE GENETICS

Parallel domestication of the Shattering1 genes in cereals

(2012) Zhongwei Lin et al.   NATURE GENETICS

Virus-induced gene silencing for Asteraceae-a reverse genetics approach for functional genomics in Gerbera hybrida

(2012) Xianbao Deng et al.   PLANT BIOTECHNOLOGY JOURNAL

A multiparent advanced generation inter-cross population for genetic analysis in wheat

(2012) Bevan E. Huang et al.   PLANT BIOTECHNOLOGY JOURNAL

Overexpression of miR156 in switchgrass (Panicum virgatum L.) results in various morphological alterations and leads to improved biomass production

(2012) Chunxiang Fu et al.   PLANT BIOTECHNOLOGY JOURNAL

ZmGA3ox2, a candidate gene for a major QTL,qPH3.1, for plant height in maize

(2012) Feng Teng et al.   PLANT JOURNAL

Development and Characterization of a New TILLING Population of Common Bread Wheat (Triticum aestivum L.)

(2012) Liang Chen et al.   PLoS One

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

(2012) G. P. Morris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The mystery of missing heritability: Genetic interactions create phantom heritability

(2012) O. Zuk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice

(2012) X. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analytical and numerical comparisons of two methods of estimation of additive × additive interaction of QTL effects

(2012) Jan Bocianowski   SCIENTIA AGRICOLA

Evaluation of diagnostic molecular markers for DUS phenotypic assessment in the cereal crop, barley (Hordeum vulgare ssp. vulgare L.)

(2012) James Cockram et al.   THEORETICAL AND APPLIED GENETICS

Mapping QTL for agronomic traits in breeding populations

(2012) Tobias Würschum   THEORETICAL AND APPLIED GENETICS

QTLs associated with root traits increase yield in upland rice when transferred through marker-assisted selection

(2012) K. A. Steele et al.   THEORETICAL AND APPLIED GENETICS

Genotyping-by-Sequencing for Plant Breeding and Genetics

(2012) Jesse A. Poland et al.   Plant Genome

Identification of SNP and SSR markers in eggplant using RAD tag sequencing

(2011) Lorenzo Barchi et al.   BMC GENOMICS

Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley

(2011) Yada Chutimanitsakun et al.   BMC GENOMICS

Association analysis of frost tolerance in rye using candidate genes and phenotypic data from controlled, semi-controlled, and field phenotyping platforms

(2011) Yongle Li et al.   BMC PLANT BIOLOGY

Multiple-Line Cross Quantitative Trait Locus Mapping in European Elite Maize

(2011) Jana Steinhoff et al.   CROP SCIENCE

QTL for yield components and protein content: a multienvironment study of two pea (Pisum sativum L.) populations

(2011) P. Krajewski et al.   EUPHYTICA

Epistasis and complementary gene action adequately account for the genetic bases of transgressive segregation of kilo-grain weight in rice

(2011) Donghai Mao et al.   EUPHYTICA

Introgression of a major gene for high grain protein content in some Indian bread wheat cultivars

(2011) J. Kumar et al.   FIELD CROPS RESEARCH

The SMALL AND ROUND SEED1 (SRS1/DEP2) gene is involved in the regulation of seed size in rice

(2011) Yuki Abe et al.   GENES & GENETIC SYSTEMS

Multiplexed shotgun genotyping for rapid and efficient genetic mapping

(2011) P. Andolfatto et al.   GENOME RESEARCH

A new QTL for resistance to Fusarium ear rot in maize

(2011) Zhi-Min Li et al.   JOURNAL OF APPLIED GENETICS

Mapping of main and epistatic effect QTLs associated to grain protein and gluten strength using a RIL population of durum wheat

(2011) Veronica Conti et al.   JOURNAL OF APPLIED GENETICS

Major genes for Na+ exclusion, Nax1 and Nax2 (wheat HKT1;4 and HKT1;5), decrease Na+ accumulation in bread wheat leaves under saline and waterlogged conditions

(2011) R. A. James et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide association study of leaf architecture in the maize nested association mapping population

(2011) Feng Tian et al.   NATURE GENETICS

Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population

(2011) Kristen L Kump et al.   NATURE GENETICS

Natural variation in GS5 plays an important role in regulating grain size and yield in rice

(2011) Yibo Li et al.   NATURE GENETICS

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Towards marker-assisted selection in pulses: a review

(2011) Jitendra Kumar et al.   PLANT BREEDING

Genetic Architecture of Maize Kernel Composition in the Nested Association Mapping and Inbred Association Panels

(2011) J. P. Cook et al.   PLANT PHYSIOLOGY

Increase in Tomato Locule Number Is Controlled by Two Single-Nucleotide Polymorphisms Located Near WUSCHEL

(2011) S. Munos et al.   PLANT PHYSIOLOGY

Molecular Characterization of Rht-1 Dwarfing Genes in Hexaploid Wheat

(2011) S. Pearce et al.   PLANT PHYSIOLOGY

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Genome-wide nested association mapping of quantitative resistance to northern leaf blight in maize

(2011) J. A. Poland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass

(2011) Chunxiang Fu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Association mapping in an elite maize breeding population

(2011) Wenxin Liu et al.   THEORETICAL AND APPLIED GENETICS

Mapping with RAD (restriction-site associated DNA) markers to rapidly identify QTL for stem rust resistance in Lolium perenne

(2011) W. F. Pfender et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Genetic Architecture of Aluminum Tolerance in Rice (Oryza sativa) Determined through Genome-Wide Association Analysis and QTL Mapping

(2011) Adam N. Famoso et al.   PLoS Genetics

Establishing Transgenic Schistosomes

(2011) Victoria H. Mann et al.   PLoS Neglected Tropical Diseases

Genetic and Molecular Bases of Rice Yield

(2010) Yongzhong Xing et al.   Annual Review of Plant Biology

From QTL to candidate gene: Genetical genomics of simple and complex traits in potato using a pooling strategy

(2010) Bjorn Kloosterman et al.   BMC GENOMICS

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence

(2010) David L Hyten et al.   BMC GENOMICS

Inheritance of drought resistance related traits in two crosses of groundnut (Arachis hypogaea L.)

(2010) H. D. Upadhyaya et al.   EUPHYTICA

Impact of epistasis and QTL × environmental interaction on the oil filling rate of soybean seed at different developmental stages

(2010) Zhenfeng Jiang et al.   EUPHYTICA

Evaluation of yield performance in rice near-isogenic lines with increased spikelet number

(2010) Akihiro Ohsumi et al.   FIELD CROPS RESEARCH

Nested Association Mapping for Identification of Functional Markers

(2010) Baohong Guo et al.   GENETICS

Expression QTLs: applications for crop improvement

(2010) Beth Holloway et al.   MOLECULAR BREEDING

Mapping of quantitative trait loci associated with protein expression variation in barley grains

(2010) Katja Witzel et al.   MOLECULAR BREEDING

A Major QTL, Ghd8, Plays Pleiotropic Roles in Regulating Grain Productivity, Plant Height, and Heading Date in Rice

(2010) Wen-Hao Yan et al.   Molecular Plant

Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice

(2010) Yongqing Jiao et al.   NATURE GENETICS

OsSPL14 promotes panicle branching and higher grain productivity in rice

(2010) Kotaro Miura et al.   NATURE GENETICS

The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato

(2010) Uri Krieger et al.   NATURE GENETICS

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

A Novel Kinesin 13 Protein Regulating Rice Seed Length

(2010) K. Kitagawa et al.   PLANT AND CELL PHYSIOLOGY

Marker-assisted selection for pre-harvest sprouting tolerance and leaf rust resistance in bread wheat

(2010) J. Kumar et al.   PLANT BREEDING

Regulatory Network Identification by Genetical Genomics: Signaling Downstream of the Arabidopsis Receptor-Like Kinase ERECTA

(2010) I. R. Terpstra et al.   PLANT PHYSIOLOGY

Natural variation for seed dormancy in Arabidopsis is regulated by additive genetic and molecular pathways

(2010) L. Bentsink et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RAS1, a quantitative trait locus for salt tolerance and ABA sensitivity in Arabidopsis

(2010) Z. Ren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide association mapping to candidate polymorphism resolution in the unsequenced barley genome

(2010) J. Cockram et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Development of highly polymorphic SNP markers from the complexity reduced portion of maize [Zea mays L.] genome for use in marker-assisted breeding

(2010) Jafar A. Mammadov et al.   THEORETICAL AND APPLIED GENETICS

Genetic basis of agronomically important traits in sugar beet (Beta vulgaris L.) investigated with joint linkage association mapping

(2010) Jochen C. Reif et al.   THEORETICAL AND APPLIED GENETICS

New approach for rice improvement using a pleiotropic QTL gene for lodging resistance and yield

(2010) Taiichiro Ookawa et al.   Nature Communications

Linkage and Association Mapping of Arabidopsis thaliana Flowering Time in Nature

(2010) Benjamin Brachi et al.   PLoS Genetics

An Ac/Ds-mediated gene trap system for functional genomics in barley

(2009) Katina Lazarow et al.   BMC GENOMICS

Defining gene and QTL networks

(2009) Ritsert C Jansen et al.   CURRENT OPINION IN PLANT BIOLOGY

Identification of alternate dwarfing gene sources to widely used Dee-Gee-Woo-Gen allele of sd1 gene by molecular and biochemical assays in rice (Oryza sativa L.)

(2009) Chiruvuri Naga Neeraja et al.   ELECTRONIC JOURNAL OF BIOTECHNOLOGY

Genome-wide QTL analysis for pre-harvest sprouting tolerance in bread wheat

(2009) Amita Mohan et al.   EUPHYTICA

ERECT PANICLE2 Encodes a Novel Protein That Regulates Panicle Erectness in Indica Rice

(2009) K. Zhu et al.   GENETICS

Candidate Gene Association Mapping of Arabidopsis Flowering Time

(2009) I. M. Ehrenreich et al.   GENETICS

The Sorghum bicolor genome and the diversification of grasses

(2009) Andrew H. Paterson et al.   NATURE

The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water

(2009) Yoko Hattori et al.   NATURE

Natural variation at the DEP1 locus enhances grain yield in rice

(2009) Xianzhong Huang et al.   NATURE GENETICS

Small silencing RNAs: an expanding universe

(2009) Megha Ghildiyal et al.   NATURE REVIEWS GENETICS

The genetics of quantitative traits: challenges and prospects

(2009) Trudy F. C. Mackay et al.   NATURE REVIEWS GENETICS

Optimizing TILLING populations for reverse genetics inMedicago truncatula

(2009) Christine Le Signor et al.   PLANT BIOTECHNOLOGY JOURNAL

Association Mapping: Critical Considerations Shift from Genotyping to Experimental Design

(2009) S. Myles et al.   PLANT CELL

Short panicle1encodes a putative PTR family transporter and determines rice panicle size

(2009) Shengben Li et al.   PLANT JOURNAL

Mutagenesis and Beyond! Tools for Understanding Legume Biology

(2009) M. Tadege et al.   PLANT PHYSIOLOGY

Mutant Resources in Rice for Functional Genomics of the Grasses

(2009) A. Krishnan et al.   PLANT PHYSIOLOGY

QTL analysis for grain colour and pre-harvest sprouting in bread wheat

(2009) Ajay Kumar et al.   PLANT SCIENCE

Genetic Properties of the Maize Nested Association Mapping Population

(2009) M. D. McMullen et al.   SCIENCE

The Genetic Architecture of Maize Flowering Time

(2009) E. S. Buckler et al.   SCIENCE

A Kinase-START Gene Confers Temperature-Dependent Resistance to Wheat Stripe Rust

(2009) D. Fu et al.   SCIENCE

A Putative ABC Transporter Confers Durable Resistance to Multiple Fungal Pathogens in Wheat

(2009) S. G. Krattinger et al.   SCIENCE

A First-Generation Haplotype Map of Maize

(2009) M. A. Gore et al.   SCIENCE

A Multiparent Advanced Generation Inter-Cross to Fine-Map Quantitative Traits in Arabidopsis thaliana

(2009) Paula X. Kover et al.   PLoS Genetics

Development of submergence-tolerant rice cultivars: the Sub1 locus and beyond

(2008) Endang M. Septiningsih et al.   ANNALS OF BOTANY

Quantitative Genomics: Analyzing Intraspecific Variation Using Global Gene Expression Polymorphisms or eQTLs

(2008) Dan Kliebenstein   Annual Review of Plant Biology

TILLING to detect induced mutations in soybean

(2008) Jennifer L Cooper et al.   BMC PLANT BIOLOGY

Applying genotyping (TILLING) and phenotyping analyses to elucidate gene function in a chemically induced sorghum mutant population

(2008) Zhanguo Xin et al.   BMC PLANT BIOLOGY

Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight

(2008) Jianfeng Weng et al.   CELL RESEARCH

Beyond silencing—engineering applications of RNA interference and antisense technology for altering cellular phenotype

(2008) Colin G Hebert et al.   CURRENT OPINION IN BIOTECHNOLOGY

From mutations to MAGIC: resources for gene discovery, validation and delivery in crop plants

(2008) Colin Cavanagh et al.   CURRENT OPINION IN PLANT BIOLOGY

The Genetic Architecture of Complex Traits in Teosinte (Zea mays ssp. parviglumis): New Evidence From Association Mapping

(2008) A. L. Weber et al.   GENETICS

Genetic Design and Statistical Power of Nested Association Mapping in Maize

(2008) Jianming Yu et al.   GENETICS

Inferring Causal Phenotype Networks From Segregating Populations

(2008) Elias Chaibub Neto et al.   GENETICS

Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice

(2008) Weiya Xue et al.   NATURE GENETICS

Control of a key transition from prostrate to erect growth in rice domestication

(2008) Lubin Tan et al.   NATURE GENETICS

A phenylalanine in DGAT is a key determinant of oil content and composition in maize

(2008) Peizhong Zheng et al.   NATURE GENETICS

Genetic control of rice plant architecture under domestication

(2008) Jian Jin et al.   NATURE GENETICS

Deletion in a gene associated with grain size increased yields during rice domestication

(2008) Ayahiko Shomura et al.   NATURE GENETICS

Epigenome dynamics: a quantitative genetics perspective

(2008) Frank Johannes et al.   NATURE REVIEWS GENETICS

Mode of Inheritance of Primary Metabolic Traits in Tomato

(2008) N. Schauer et al.   PLANT CELL

Identification and characterization of a hypoallergenic ortholog of Ara h 2.01

(2008) M. Laura Ramos et al.   PLANT MOLECULAR BIOLOGY

RNA Silencing in Plants: Yesterday, Today, and Tomorrow

(2008) A. Eamens et al.   PLANT PHYSIOLOGY

Genetic dissection and pyramiding of quantitative traits for panicle architecture by using chromosomal segment substitution lines in rice

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