The roles of plasticity and evolutionary change in shaping gene expression variation in natural populations of extremophile fish
出版年份 2017 全文链接
标题
The roles of plasticity and evolutionary change in shaping gene expression variation in natural populations of extremophile fish
作者
关键词
-
出版物
MOLECULAR ECOLOGY
Volume 26, Issue 22, Pages 6384-6399
出版商
Wiley
发表日期
2017-09-19
DOI
10.1111/mec.14360
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Complexities of gene expression patterns in natural populations of an extremophile fish (Poecilia mexicana , Poeciliidae)
- (2017) Courtney N. Passow et al. MOLECULAR ECOLOGY
- Contrasting effects of environment and genetics generate a continuum of parallel evolution
- (2017) Yoel E. Stuart et al. Nature Ecology & Evolution
- The Evolutionary Ecology of Animals Inhabiting Hydrogen Sulfide–Rich Environments
- (2016) Michael Tobler et al. Annual Review of Ecology Evolution and Systematics
- Sulfide exposure results in enhanced sqr transcription through upregulating the expression and activation of HSF1 in echiuran worm Urechis unicinctus
- (2016) Xiaolong Liu et al. AQUATIC TOXICOLOGY
- Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster
- (2016) Korbinian von Heckel et al. BMC GENOMICS
- Adaptive, but not condition-dependent, body shape differences contribute to assortative mating preferences during ecological speciation
- (2016) Ryan Greenway et al. EVOLUTION
- Toxic hydrogen sulphide shapes brain anatomy: a comparative study of sulphide-adapted ecotypes in thePoecilia mexicanacomplex
- (2016) T. Schulz-Mirbach et al. JOURNAL OF ZOOLOGY
- Mechanisms Underlying Adaptation to Life in Hydrogen Sulfide–Rich Environments
- (2016) Joanna L. Kelley et al. MOLECULAR BIOLOGY AND EVOLUTION
- Phylogenetic analyses of the subgenus Mollienesia ( Poecilia , Poeciliidae, Teleostei) reveal taxonomic inconsistencies, cryptic biodiversity, and spatio-temporal aspects of diversification in Middle America
- (2016) Maura Palacios et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
- (2016) Mihaela Pertea et al. Nature Protocols
- A single generation of domestication heritably alters the expression of hundreds of genes
- (2016) Mark R. Christie et al. Nature Communications
- Experimental Evolution of Gene Expression and Plasticity in Alternative Selective Regimes
- (2016) Yuheng Huang et al. PLoS Genetics
- Transcriptional response to sulfide in the Echiuran Worm Urechis unicinctus by digital gene expression analysis
- (2015) Xiaolong Liu et al. BMC GENOMICS
- Transcriptomic response to heat stress among ecologically divergent populations of redband trout
- (2015) Shawn R Narum et al. BMC GENOMICS
- Convergent changes in the trophic ecology of extremophile fish along replicated environmental gradients
- (2015) Michael Tobler et al. FRESHWATER BIOLOGY
- Unique evolutionary trajectories in repeated adaptation to hydrogen sulphide-toxic habitats of a neotropical fish (Poecilia mexicana)
- (2015) Markus Pfenninger et al. MOLECULAR ECOLOGY
- Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature
- (2015) Cameron K. Ghalambor et al. NATURE
- StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
- (2015) Mihaela Pertea et al. NATURE BIOTECHNOLOGY
- limma powers differential expression analyses for RNA-sequencing and microarray studies
- (2015) Matthew E. Ritchie et al. NUCLEIC ACIDS RESEARCH
- Reduction of Energetic Demands through Modification of Body Size and Routine Metabolic Rates in Extremophile Fish
- (2015) Courtney N. Passow et al. PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY
- Sulfur as a Signaling Nutrient Through Hydrogen Sulfide
- (2014) Omer Kabil et al. Annual Review of Nutrition
- H2S exposure elicits differential expression of candidate genes in fish adapted to sulfidic and non-sulfidic environments
- (2014) Michael Tobler et al. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY
- Selection from parasites favours immunogenetic diversity but not divergence among locally adapted host populations
- (2014) M. Tobler et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- The Evolution and Adaptive Potential of Transcriptional Variation in Sticklebacks—Signatures of Selection and Widespread Heritability
- (2014) Erica H. Leder et al. MOLECULAR BIOLOGY AND EVOLUTION
- Natural Selection Canalizes Expression Variation of Environmentally Induced Plasticity-Enabling Genes
- (2014) Joseph R. Shaw et al. MOLECULAR BIOLOGY AND EVOLUTION
- Gene expression plasticity evolves in response to colonization of freshwater lakes in threespine stickleback
- (2014) Matthew R. J. Morris et al. MOLECULAR ECOLOGY
- Rfam 12.0: updates to the RNA families database
- (2014) Eric P. Nawrocki et al. NUCLEIC ACIDS RESEARCH
- Parallel evolution of cox genes in H2S-tolerant fish as key adaptation to a toxic environment
- (2014) Markus Pfenninger et al. Nature Communications
- Colonisation of toxic environments drives predictable life-history evolution in livebearing fishes (Poeciliidae)
- (2013) Rüdiger Riesch et al. ECOLOGY LETTERS
- GENETIC DIFFERENTIATION AND SELECTION AGAINST MIGRANTS IN EVOLUTIONARILY REPLICATED EXTREME ENVIRONMENTS
- (2013) Martin Plath et al. EVOLUTION
- Thermal adaptation and acclimation of ectotherms from differing aquatic climates
- (2013) Shawn R. Narum et al. MOLECULAR ECOLOGY
- Ecological genomics of local adaptation
- (2013) Outi Savolainen et al. NATURE REVIEWS GENETICS
- The Rediscovery of a Long Described Species Reveals Additional Complexity in Speciation Patterns of Poeciliid Fishes in Sulfide Springs
- (2013) Maura Palacios et al. PLoS One
- Gene transcription reflects poor health status of resident European eel chronically exposed to environmental pollutants
- (2012) G.E. Maes et al. AQUATIC TOXICOLOGY
- Human Sulfide:Quinone Oxidoreductase Catalyzes the First Step in Hydrogen Sulfide Metabolism and Produces a Sulfane Sulfur Metabolite
- (2012) Michael R. Jackson et al. BIOCHEMISTRY
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Balancing noise and plasticity in eukaryotic gene expression
- (2012) Djordje Bajić et al. BMC GENOMICS
- Genomic resources for a model in adaptation and speciation research: characterization of the Poecilia mexicana transcriptome
- (2012) Joanna L Kelley et al. BMC GENOMICS
- Comparative genomics in ecological physiology: toward a more nuanced understanding of acclimation and adaptation
- (2012) A. Whitehead JOURNAL OF EXPERIMENTAL BIOLOGY
- Evolution of gene expression and expression plasticity in long-term experimental populations ofDrosophila melanogastermaintained under constant and variable ethanol stress
- (2012) LEV Y. YAMPOLSKY et al. MOLECULAR ECOLOGY
- Phylogeny and biogeography of the Poecilia sphenops species complex (Actinopterygii, Poeciliidae) in Central America
- (2012) Fernando Alda et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Regulatory changes contribute to the adaptive enhancement of thermogenic capacity in high-altitude deer mice
- (2012) Z. A. Cheviron et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Hydrogen Sulfide and Cell Signaling
- (2011) Ling Li et al. Annual Review of Pharmacology and Toxicology
- Assessment of Chemical Mixtures and Groundwater Effects on Daphnia magna Transcriptomics
- (2011) Natàlia Garcia-Reyero et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- PARALLEL AND NONPARALLEL ASPECTS OF ECOLOGICAL, PHENOTYPIC, AND GENETIC DIVERGENCE ACROSS REPLICATE POPULATION PAIRS OF LAKE AND STREAM STICKLEBACK
- (2011) Renaud Kaeuffer et al. EVOLUTION
- EVOLUTION IN EXTREME ENVIRONMENTS: REPLICATED PHENOTYPIC DIFFERENTIATION IN LIVEBEARING FISH INHABITING SULFIDIC SPRINGS
- (2011) Michael Tobler et al. EVOLUTION
- Response of Sulfide:Quinone Oxidoreductase to Sulfide Exposure in the Echiuran Worm Urechis unicinctus
- (2011) Yu-Bin Ma et al. MARINE BIOTECHNOLOGY
- Transcriptomics of environmental acclimatization and survival in wild adult Pacific sockeye salmon (Oncorhynchus nerka) during spawning migration
- (2011) TYLER G. EVANS et al. MOLECULAR ECOLOGY
- INTEGRATING EVOLUTIONARY AND FUNCTIONAL APPROACHES TO INFER ADAPTATION AT SPECIFIC LOCI
- (2010) Jay F. Storz et al. EVOLUTION
- Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads
- (2010) G. Lunter et al. GENOME RESEARCH
- Effect of pH on Gene Expression and Thermal Tolerance of Early Life History Stages of Red Abalone (Haliotis rufescens)
- (2010) MacKenzie L. Zippay et al. JOURNAL OF SHELLFISH RESEARCH
- Comparative transcriptomics implicates mechanisms of evolved pollution tolerance in a killifish population
- (2010) A. WHITEHEAD et al. MOLECULAR ECOLOGY
- Phenotypic plasticity facilitates recurrent rapid adaptation to introduced predators
- (2010) A. G. Scoville et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A scaling normalization method for differential expression analysis of RNA-seq data
- (2010) Mark D Robinson et al. GENOME BIOLOGY
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
- (2009) Eran Eden et al. BMC BIOINFORMATICS
- ADAPTIVE DIVERGENCE BETWEEN FRESHWATER AND MARINE STICKLEBACKS: INSIGHTS INTO THE ROLE OF PHENOTYPIC PLASTICITY FROM AN INTEGRATED ANALYSIS OF CANDIDATE GENE EXPRESSION
- (2009) R. J. Scott McCairns et al. EVOLUTION
- Adaptation to an extraordinary environment by evolution of phenotypic plasticity and genetic assimilation
- (2009) R. LANDE JOURNAL OF EVOLUTIONARY BIOLOGY
- Loss of ETHE1, a mitochondrial dioxygenase, causes fatal sulfide toxicity in ethylmalonic encephalopathy
- (2009) Valeria Tiranti et al. NATURE MEDICINE
- The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration
- (2009) M. Marcia et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interactions between effects of environmental chemicals and natural stressors: A review
- (2009) Martin Holmstrup et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Transgenerational Epigenetic Effects
- (2008) Neil A. Youngson et al. Annual Review of Genomics and Human Genetics
- Rhythms of Gene Expression in a Fluctuating Intertidal Environment
- (2008) Andrew Y. Gracey et al. CURRENT BIOLOGY
- Three enzymatic activities catalyze the oxidation of sulfide to thiosulfate in mammalian and invertebrate mitochondria
- (2008) Tatjana M. Hildebrandt et al. FEBS Journal
- The inhibition of mitochondrial cytochrome oxidase by the gases carbon monoxide, nitric oxide, hydrogen cyanide and hydrogen sulfide: chemical mechanism and physiological significance
- (2008) Chris E. Cooper et al. JOURNAL OF BIOENERGETICS AND BIOMEMBRANES
- Transcriptomic variation and plasticity in rufous-collared sparrows (Zonotrichia capensis) along an altitudinal gradient
- (2008) ZACHARY A. CHEVIRON et al. MOLECULAR ECOLOGY
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now