Transcriptomic response to heat stress among ecologically divergent populations of redband trout

Thermal adaptation and acclimation of ectotherms from differing aquatic climates

(2013) Shawn R. Narum et al.   MOLECULAR ECOLOGY

Genotyping-by-sequencing in ecological and conservation genomics

(2013) Shawn R. Narum et al.   MOLECULAR ECOLOGY

Principles of transcriptome analysis and gene expression quantification: an RNA-seq tutorial

(2013) Jochen B. W. Wolf   Molecular Ecology Resources

Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data

(2013) Ram Vinay Pandey et al.   Molecular Ecology Resources

Of contigs and quagmires: next-generation sequencing pitfalls associated with transcriptomic studies

(2013) J. Andrew DeWoody et al.   Molecular Ecology Resources

De novotranscriptomic analyses for non-model organisms: an evaluation of methods across a multi-species data set

(2013) Sonal Singhal   Molecular Ecology Resources

What is conservation physiology? Perspectives on an increasingly integrated and essential science

(2013) S. J. Cooke et al.   Conservation Physiology

Quantitative RNA-Seq analysis in non-model species: assessing transcriptome assemblies as a scaffold and the utility of evolutionary divergent genomic reference species

(2012) Emily A Hornett et al.   BMC GENOMICS

Stream isotherm shifts from climate change and implications for distributions of ectothermic organisms

(2012) Daniel J. Isaak et al.   GLOBAL CHANGE BIOLOGY

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Generation of a reference transcriptome for evaluating rainbow trout responses to various stressors

(2011) Cecilia C Sánchez et al.   BMC GENOMICS

Thermal adaptation and ecological speciation

(2011) I. KELLER et al.   MOLECULAR ECOLOGY

Climate change and evolutionary adaptation

(2011) Ary A. Hoffmann et al.   NATURE

Flow regime, temperature, and biotic interactions drive differential declines of trout species under climate change

(2011) S. J. Wenger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differences in Thermal Tolerance Among Sockeye Salmon Populations

(2011) E. J. Eliason et al.   SCIENCE

Genomic Signatures Predict Migration and Spawning Failure in Wild Canadian Salmon

(2011) K. M. Miller et al.   SCIENCE

Contemporary temperature-driven divergence in a Nordic freshwater fish under conditions commonly thought to hinder adaptation

(2010) Kathryn D Kavanagh et al.   BMC EVOLUTIONARY BIOLOGY

Oxygen- and capacity-limitation of thermal tolerance: a matrix for integrating climate-related stressor effects in marine ecosystems

(2010) H.-O. Portner   JOURNAL OF EXPERIMENTAL BIOLOGY

The physiology of climate change: how potentials for acclimatization and genetic adaptation will determine 'winners' and 'losers'

(2010) G. N. Somero   JOURNAL OF EXPERIMENTAL BIOLOGY

Functional Genomics of Physiological Plasticity and Local Adaptation in Killifish

(2010) A. Whitehead et al.   JOURNAL OF HEREDITY

Adaptation of redband trout in desert and montane environments

(2010) SHAWN R. NARUM et al.   MOLECULAR ECOLOGY

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

Comparison of Growth and Stress in Resident Redband Trout Held in Laboratory Simulations of Montane and Desert Summer Temperature Cycles

(2010) John D. Cassinelli et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Environment, antecedents and climate change: lessons from the study of temperature physiology and river migration of salmonids

(2009) A. P. Farrell   JOURNAL OF EXPERIMENTAL BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Temperature adaptation of cytosolic malate dehydrogenases of limpets (genus Lottia): differences in stability and function due to minor changes in sequence correlate with biogeographic and vertical distributions

(2008) Y. Dong et al.   JOURNAL OF EXPERIMENTAL BIOLOGY