Landscape features along migratory routes influence adaptive genomic variation in anadromous steelhead (Oncorhynchus mykiss )
出版年份 2017 全文链接
标题
Landscape features along migratory routes influence adaptive genomic variation in anadromous steelhead (Oncorhynchus mykiss
)
作者
关键词
-
出版物
MOLECULAR ECOLOGY
Volume 27, Issue 1, Pages 128-145
出版商
Wiley
发表日期
2017-11-07
DOI
10.1111/mec.14407
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Sea-to-sea survival of late-run adult steelhead (Oncorhynchus mykiss) from the Columbia and Snake rivers
- (2018) Matthew L. Keefer et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage
- (2017) Stuart C. Willis et al. Molecular Ecology Resources
- What goes up does not come down: the stock composition and demographic characteristics of upstream migrating steelhead differ from post-spawn emigrating kelts
- (2016) Andrew P. Matala et al. ICES JOURNAL OF MARINE SCIENCE
- Climate variables explain neutral and adaptive variation within salmonid metapopulations: the importance of replication in landscape genetics
- (2016) Brian K. Hand et al. MOLECULAR ECOLOGY
- Controlling false discoveries in genome scans for selection
- (2016) Olivier François et al. MOLECULAR ECOLOGY
- An approach for identifying cryptic barriers to gene flow that limit species' geographic ranges
- (2016) Steven J. Micheletti et al. MOLECULAR ECOLOGY
- High performance computation of landscape genomic models including local indicators of spatial association
- (2016) S. Stucki et al. Molecular Ecology Resources
- pcadapt: anRpackage to perform genome scans for selection based on principal component analysis
- (2016) Keurcien Luu et al. Molecular Ecology Resources
- Genetic basis of adult migration timing in anadromous steelhead discovered through multivariate association testing
- (2016) Jon E. Hess et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Forecasting Ecological Genomics: High-Tech Animal Instrumentation Meets High-Throughput Sequencing
- (2016) Aaron B. A. Shafer et al. PLOS BIOLOGY
- Genome-Wide SNP Calling from Genotyping by Sequencing (GBS) Data: A Comparison of Seven Pipelines and Two Sequencing Technologies
- (2016) Davoud Torkamaneh et al. PLoS One
- Reliable Detection of Loci Responsible for Local Adaptation: Inference of a Null Model through Trimming the Distribution of FST
- (2015) Michael C. Whitlock et al. AMERICAN NATURALIST
- Anadromy and residency in steelhead and rainbow trout (Oncorhynchus mykiss): a review of the processes and patterns
- (2015) Neala W. Kendall et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Fitting Linear Mixed-Effects Models Usinglme4
- (2015) Douglas Bates et al. Journal of Statistical Software
- Environmental adaptation in Chinook salmon (Oncorhynchus tshawytscha) throughout their North American range
- (2015) Benjamin C. Hecht et al. MOLECULAR ECOLOGY
- A practical guide to environmental association analysis in landscape genomics
- (2015) Christian Rellstab et al. MOLECULAR ECOLOGY
- A new FST-based method to uncover local adaptation using environmental variables
- (2015) Pierre de Villemereuil et al. Methods in Ecology and Evolution
- Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes
- (2014) Andrew P. Matala et al. Evolutionary Applications
- fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets
- (2014) Anil Raj et al. GENETICS
- Fatty-acid profiles of white muscle and liver in stream-maturing steelhead troutOncorhynchus mykissfrom early migration to kelt emigration
- (2014) Z. L. Penney et al. JOURNAL OF FISH BIOLOGY
- Genome Scans for Detecting Footprints of Local Adaptation Using a Bayesian Factor Model
- (2014) Nicolas Duforet-Frebourg et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests
- (2014) Katie E. Lotterhos et al. MOLECULAR ECOLOGY
- Performance of partial statistics in individual-based landscape genetics
- (2014) E. M. Kierepka et al. Molecular Ecology Resources
- Genotyping-in-Thousands by sequencing (GT-seq): A cost effective SNP genotyping method based on custom amplicon sequencing
- (2014) Nathan R. Campbell et al. Molecular Ecology Resources
- Environmental Variables Explain Genetic Structure in a Beetle-Associated Nematode
- (2014) Angela McGaughran et al. PLoS One
- Adaptive potential of a Pacific salmon challenged by climate change
- (2014) Nicolas J. Muñoz et al. Nature Climate Change
- Rates of straying by hatchery-produced Pacific salmon (Oncorhynchus spp.) and steelhead (Oncorhynchus mykiss) differ among species, life history types, and populations
- (2013) Peter A.H. Westley et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- LANDSCAPE GENOMICS IN ATLANTIC SALMON (SALMO SALAR): SEARCHING FOR GENE-ENVIRONMENT INTERACTIONS DRIVING LOCAL ADAPTATION
- (2013) Bourret Vincent et al. EVOLUTION
- Robust Identification of Local Adaptation from Allele Frequencies
- (2013) T. Gunther et al. GENETICS
- Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models
- (2013) Eric Frichot et al. MOLECULAR BIOLOGY AND EVOLUTION
- Detecting selection along environmental gradients: analysis of eight methods and their effectiveness for outbreeding and selfing populations
- (2013) Stéphane De Mita et al. MOLECULAR ECOLOGY
- Genotyping-by-sequencing in ecological and conservation genomics
- (2013) Shawn R. Narum et al. MOLECULAR ECOLOGY
- Stacks: an analysis tool set for population genomics
- (2013) Julian Catchen et al. MOLECULAR ECOLOGY
- Putting the landscape into the genomics of trees: approaches for understanding local adaptation and population responses to changing climate
- (2013) V. L. Sork et al. Tree Genetics & Genomes
- Genetic Architecture of Migration-Related Traits in Rainbow and Steelhead Trout, Oncorhynchus mykis s
- (2013) Benjamin C. Hecht et al. G3-Genes Genomes Genetics
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Comparing Habitat Suitability and Connectivity Modeling Methods for Conserving Pronghorn Migrations
- (2012) Erin E. Poor et al. PLoS One
- adegenet 1.3-1: new tools for the analysis of genome-wide SNP data
- (2011) Thibaut Jombart et al. BIOINFORMATICS
- Comparison ofFSToutlier tests for SNP loci under selection
- (2011) SHAWN R. NARUM et al. Molecular Ecology Resources
- Differences in Thermal Tolerance Among Sockeye Salmon Populations
- (2011) E. J. Eliason et al. SCIENCE
- Major Lineages and Metapopulations in Columbia RiverOncorhynchus mykissAre Structured by Dynamic Landscape Features and Environments
- (2011) Scott M. Blankenship et al. TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY
- The genetics of migration on the move
- (2011) Miriam Liedvogel et al. TRENDS IN ECOLOGY & EVOLUTION
- Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
- (2010) Thibaut Jombart et al. BMC GENETICS
- Comparative landscape genetic analysis of three Pacific salmon species from subarctic North America
- (2010) Jeffrey B. Olsen et al. CONSERVATION GENETICS
- The gene, environment association studies consortium (GENEVA): maximizing the knowledge obtained from GWAS by collaboration across studies of multiple conditions
- (2010) Marilyn C. Cornelis et al. GENETIC EPIDEMIOLOGY
- Using Environmental Correlations to Identify Loci Underlying Local Adaptation
- (2010) G. Coop et al. GENETICS
- Forward Regression for Ultra-High Dimensional Variable Screening
- (2010) Hansheng Wang JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION
- Landscape influences on genetic differentiation among bull trout populations in a stream-lake network
- (2010) MICHAEL H. MEEUWIG et al. MOLECULAR ECOLOGY
- Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field
- (2010) STÉPHANIE MANEL et al. MOLECULAR ECOLOGY
- Gene–environment-wide association studies: emerging approaches
- (2010) Duncan Thomas NATURE REVIEWS GENETICS
- Tracking of Arctic terns Sterna paradisaea reveals longest animal migration
- (2010) C. Egevang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Python based GIS tools for landscape genetics: visualising genetic relatedness and measuring landscape connectivity
- (2010) Thomas R. Etherington Methods in Ecology and Evolution
- Iteroparity in Columbia River summer-run steelhead (Oncorhynchus mykiss): implications for conservation
- (2009) Matthew L. Keefer et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method
- (2008) Tiago Antao et al. BMC BIOINFORMATICS
- Influence of landscape on resident and anadromous life history types of Oncorhynchus mykiss
- (2008) Shawn R. Narum et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Regulatory Polymorphisms in the Promoter of CXCL10 Gene and Disease Progression in Male Hepatitis B Virus Carriers
- (2008) Guohong Deng et al. GASTROENTEROLOGY
- A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective
- (2008) M. Foll et al. GENETICS
- Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
- (2008) Nathan A. Baird et al. PLoS One
- genepop’007: a complete re-implementation of the genepop software for Windows and Linux
- (2007) FRANÇOIS ROUSSET Molecular Ecology Resources
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now