标题
Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism
作者
关键词
-
出版物
MOLECULAR ECOLOGY
Volume 26, Issue 21, Pages 6122-6135
出版商
Wiley
发表日期
2017-08-09
DOI
10.1111/mec.14285
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Morphotype of bacteroids in different legumes correlates with the number and type of symbiotic NCR peptides
- (2017) Jesús Montiel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multiple mutualist effects on genomewide expression in the tripartite association betweenMedicago truncatula,nitrogen-fixing bacteria and mycorrhizal fungi
- (2016) Michelle E. Afkhami et al. MOLECULAR ECOLOGY
- Within-host evolution of bacterial pathogens
- (2016) Xavier Didelot et al. NATURE REVIEWS MICROBIOLOGY
- The evolution of symbiont preference traits in the model legume Medicago truncatula
- (2016) Rebecca T. Batstone et al. NEW PHYTOLOGIST
- Disulfide cross-linking influences symbiotic activities of nodule peptide NCR247
- (2016) Mohammed Shabab et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Snapshot of Functional Genetic Studies in Medicago truncatula
- (2016) Yun Kang et al. Frontiers in Plant Science
- Tripartite mutualism: Facilitation or trade-offs between rhizobial and mycorrhizal symbionts of legume hosts
- (2015) Julia N. Ossler et al. AMERICAN JOURNAL OF BOTANY
- Cheaters must prosper: reconciling theoretical and empirical perspectives on cheating in mutualism
- (2015) Emily I. Jones et al. ECOLOGY LETTERS
- Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature
- (2015) Cameron K. Ghalambor et al. NATURE
- Eco-Evo-Devo: developmental symbiosis and developmental plasticity as evolutionary agents
- (2015) Scott F. Gilbert et al. NATURE REVIEWS GENETICS
- The Pfam protein families database: towards a more sustainable future
- (2015) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Deep Sequencing of theMedicago truncatulaRoot Transcriptome Reveals a Massive and Early Interaction between Nodulation Factor and Ethylene Signals
- (2015) Estíbaliz Larrainzar et al. PLANT PHYSIOLOGY
- The Micro-RNA172c-APETALA2-1 Node as a Key Regulator of the Common Bean-Rhizobium etliNitrogen Fixation Symbiosis
- (2015) Bárbara Nova-Franco et al. PLANT PHYSIOLOGY
- Association mapping reveals the role of purifying selection in the maintenance of genomic variation in gene expression
- (2015) Emily B. Josephs et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Rhizobium–legume symbioses: the crucial role of plant immunity
- (2015) Benjamin Gourion et al. TRENDS IN PLANT SCIENCE
- Allelic variation contributes to bacterial host specificity
- (2015) Min Yue et al. Nature Communications
- Flux Control in a Defense Pathway in Arabidopsis thaliana Is Robust to Environmental Perturbations and Controls Variation in Adaptive Traits
- (2015) Carrie F. Olson-Manning et al. G3-Genes Genomes Genetics
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- InterProScan 5: genome-scale protein function classification
- (2014) P. Jones et al. BIOINFORMATICS
- Extreme specificity of NCR gene expression in Medicago truncatula
- (2014) Ibtissem Guefrachi et al. BMC GENOMICS
- An improved genome release (version Mt4.0) for the model legume Medicago truncatula
- (2014) Haibao Tang et al. BMC GENOMICS
- How context dependent are species interactions?
- (2014) Scott A. Chamberlain et al. ECOLOGY LETTERS
- Multihost Experimental Evolution of the Pathogen Ralstonia solanacearum Unveils Genes Involved in Adaptation to Plants
- (2014) Alice Guidot et al. MOLECULAR BIOLOGY AND EVOLUTION
- Global reprogramming of transcription and metabolism inMedicago truncatuladuring progressive drought and after rewatering
- (2014) JI-YI ZHANG et al. PLANT CELL AND ENVIRONMENT
- An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing
- (2014) Brice Roux et al. PLANT JOURNAL
- Standing genetic variation in host preference for mutualist microbial symbionts
- (2014) A. K. Simonsen et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Mapping the Fitness Landscape of Gene Expression Uncovers the Cause of Antagonism and Sign Epistasis between Adaptive Mutations
- (2014) Hsin-Hung Chou et al. PLoS Genetics
- Nodule carbohydrate catabolism is enhanced in the Medicago truncatula A17-Sinorhizobium medicae WSM419 symbiosis
- (2014) EstÃbaliz Larrainzar et al. Frontiers in Microbiology
- The symbiont side of symbiosis: do microbes really benefit?
- (2014) Justine R. Garcia et al. Frontiers in Microbiology
- Transcriptional responses of Medicago truncatula upon sulfur deficiency stress and arbuscular mycorrhizal symbiosis
- (2014) Daniel Wipf et al. Frontiers in Plant Science
- Transport and Metabolism in Legume-Rhizobia Symbioses
- (2013) Michael Udvardi et al. Annual Review of Plant Biology
- Common bean (Phaseolus vulgaris L.) PvTIFY orchestrates global changes in transcript profile response to jasmonate and phosphorus deficiency
- (2013) Rosaura Aparicio-Fabre et al. BMC PLANT BIOLOGY
- EXPLAINING MUTUALISM VARIATION: A NEW EVOLUTIONARY PARADOX?
- (2013) Katy D. Heath et al. EVOLUTION
- APETALA2/Ethylene Responsive Factor (AP2/ERF) transcription factors: mediators of stress responses and developmental programs
- (2013) Francesco Licausi et al. NEW PHYTOLOGIST
- Expression Quantitative Trait Locus Mapping across Water Availability Environments Reveals Contrasting Associations with Genomic Features in Arabidopsis
- (2013) D. B. Lowry et al. PLANT CELL
- Candidate Genes and Genetic Architecture of Symbiotic and Agronomic Traits Revealed by Whole-Genome, Sequence-Based Association Genetics in Medicago truncatula
- (2013) John Stanton-Geddes et al. PLoS One
- Iron: an essential micronutrient for the legume-rhizobium symbiosis
- (2013) Ella M. Brear et al. Frontiers in Plant Science
- Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies
- (2013) Masayuki Sugawara et al. GENOME BIOLOGY
- Glutamine Synthetase in Legumes: Recent Advances in Enzyme Structure and Functional Genomics
- (2012) Marco Betti et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Evolution of Flux Control in the Glucosinolate Pathway in Arabidopsis thaliana
- (2012) Carrie F. Olson-Manning et al. MOLECULAR BIOLOGY AND EVOLUTION
- Transcriptomic insights into mechanisms of symbiotic cooperation
- (2012) Ellen L. Simms et al. MOLECULAR ECOLOGY
- Coevolutionary genetic variation in the legume-rhizobium transcriptome
- (2012) KATY D. HEATH et al. MOLECULAR ECOLOGY
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Widespread fitness alignment in the legume-rhizobium symbiosis
- (2012) Maren L. Friesen NEW PHYTOLOGIST
- Local and systemic N signaling are involved in Medicago truncatula preference for the most efficient Sinorhizobium symbiotic partners
- (2012) Gisèle Laguerre et al. NEW PHYTOLOGIST
- Mapping the Genetic Basis of Symbiotic Variation in Legume-Rhizobium Interactions in Medicago truncatula
- (2012) Amanda J. Gorton et al. G3-Genes Genomes Genetics
- Population Genomics of the Facultatively Mutualistic Bacteria Sinorhizobium meliloti and S. medicae
- (2012) Brendan Epstein et al. PLoS Genetics
- The Rules of Engagement in the Legume-Rhizobial Symbiosis
- (2011) Giles E.D. Oldroyd et al. Annual Review of Genetics
- Life Histories of Symbiotic Rhizobia and Mycorrhizal Fungi
- (2011) R. Ford Denison et al. CURRENT BIOLOGY
- Origin and evolutionary analysis of the plant-specific TIFY transcription factor family
- (2011) Youhuang Bai et al. GENOMICS
- The Medicago genome provides insight into the evolution of rhizobial symbioses
- (2011) Nevin D. Young et al. NATURE
- Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula
- (2011) A. Branca et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolutionary transitions in bacterial symbiosis
- (2011) J. L. Sachs et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Failure to fix nitrogen by non-reproductive symbiotic rhizobia triggers host sanctions that reduce fitness of their reproductive clonemates
- (2011) R. Oono et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Evolutionary microbial genomics: insights into bacterial host adaptation
- (2010) Christina Toft et al. NATURE REVIEWS GENETICS
- Recent insights into antioxidant defenses of legume root nodules
- (2010) Manuel Becana et al. NEW PHYTOLOGIST
- Partner choice in Medicago Truncatula-Sinorhizobium symbiosis
- (2010) C. Gubry-Rangin et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The study of eQTL variations by RNA-seq: from SNPs to phenotypes
- (2010) Jacek Majewski et al. TRENDS IN GENETICS
- Complete genome sequence of the Medicago microsymbiont Ensifer (Sinorhizobium) medicae strain WSM419
- (2010) Wayne Reeve et al. Standards in Genomic Sciences
- Functional Role of Bradyrhizobium japonicum Trehalose Biosynthesis and Metabolism Genes during Physiological Stress and Nodulation
- (2009) M. Sugawara et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- The Medicago truncatula gene expression atlas web server
- (2009) Ji He et al. BMC BIOINFORMATICS
- The Evolution of Control and Distribution of Adaptive Mutations in a Metabolic Pathway
- (2009) K. M. Wright et al. GENETICS
- STABILIZING MECHANISMS IN A LEGUME-RHIZOBIUM MUTUALISM
- (2008) Katy D. Heath et al. EVOLUTION
- Epistasis — the essential role of gene interactions in the structure and evolution of genetic systems
- (2008) Patrick C. Phillips NATURE REVIEWS GENETICS
- The model legumeMedicago truncatulaA17 is poorly matched for N2fixation with the sequenced microsymbiontSinorhizobium meliloti1021
- (2008) Jason J. Terpolilli et al. NEW PHYTOLOGIST
- Global inputs of biological nitrogen fixation in agricultural systems
- (2008) David F. Herridge et al. PLANT AND SOIL
- A gene expression atlas of the model legumeMedicago truncatula
- (2008) Vagner A. Benedito et al. PLANT JOURNAL
- Large-scale insertional mutagenesis using the Tnt1 retrotransposon in the model legume Medicago truncatula
- (2008) Million Tadege et al. PLANT JOURNAL
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