Antiviral Response in the Nasopharynx Identifies Patients With Respiratory Virus Infection

Detection of Host Response to Viral Respiratory Infection by Measurement of Messenger RNA for MxA, TRIM21, and Viperin in Nasal Swabs

(2017) Mohamed Yahya et al.   JOURNAL OF INFECTIOUS DISEASES

Rhinovirus Detection in Symptomatic and Asymptomatic Children: Value of Host Transcriptome Analysis

(2016) Santtu Heinonen et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Unbiased Detection of Respiratory Viruses by Use of RNA Sequencing-Based Metagenomics: a Systematic Comparison to a Commercial PCR Panel

(2016) Erin H. Graf et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Regulation and function of the cGAS–STING pathway of cytosolic DNA sensing

(2016) Qi Chen et al.   NATURE IMMUNOLOGY

Robust classification of bacterial and viral infections via integrated host gene expression diagnostics

(2016) Timothy E. Sweeney et al.   Science Translational Medicine

Community Surveillance of Respiratory Viruses Among Families in the Utah Better Identification of Germs-Longitudinal Viral Epidemiology (BIG-LoVE) Study

(2015) Carrie L. Byington et al.   CLINICAL INFECTIOUS DISEASES

Integrated, Multi-cohort Analysis Identifies Conserved Transcriptional Signatures across Multiple Respiratory Viruses

(2015) Marta Andres-Terre et al.   IMMUNITY

Picornavirus-Induced Airway Mucosa Immune Profile in Asymptomatic Neonates

(2015) Helene M. Wolsk et al.   JOURNAL OF INFECTIOUS DISEASES

Moving Toward Prime Time: Host Signatures for Diagnosis of Respiratory Infections

(2015) Ephraim L. Tsalik et al.   JOURNAL OF INFECTIOUS DISEASES

Superiority of Transcriptional Profiling Over Procalcitonin for Distinguishing Bacterial From Viral Lower Respiratory Tract Infections in Hospitalized Adults

(2015) Nicolas M. Suarez et al.   JOURNAL OF INFECTIOUS DISEASES

Detection of 12 respiratory viruses by duplex real time PCR assays in respiratory samples

(2015) Rosaria Arvia et al.   MOLECULAR AND CELLULAR PROBES

Respiratory epithelial cells orchestrate pulmonary innate immunity

(2015) Jeffrey A Whitsett et al.   NATURE IMMUNOLOGY

Multiplex SYBR Green Real-Time PCR Assay for Detection of Respiratory Viruses

(2015) Mozhdeh Sultani et al.   Jundishapur Journal of Microbiology

Host Transcriptional Response to Influenza and Other Acute Respiratory Viral Infections – A Prospective Cohort Study

(2015) Yijie Zhai et al.   PLoS Pathogens

Establishing the role of ATP for the function of the RIG-I innate immune sensor

(2015) David C Rawling et al.   eLife

Interferon-Stimulated Genes: A Complex Web of Host Defenses

(2014) William M. Schneider et al.   Annual Review of Immunology

A Host Transcriptional Signature for Presymptomatic Detection of Infection in Humans Exposed to Influenza H1N1 or H3N2

(2013) Christopher W. Woods et al.   PLoS One

A Host-Based RT-PCR Gene Expression Signature to Identify Acute Respiratory Viral Infection

(2013) A. K. Zaas et al.   Science Translational Medicine

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Plasticity and Virus Specificity of the Airway Epithelial Cell Immune Response during Respiratory Virus Infection

(2012) I. Ioannidis et al.   JOURNAL OF VIROLOGY

CXCR3 in T cell function

(2011) Joanna R. Groom et al.   EXPERIMENTAL CELL RESEARCH

Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies

(2011) Yong Kong   GENOMICS

Design and Performance of the CDC Real-Time Reverse Transcriptase PCR Swine Flu Panel for Detection of 2009 A (H1N1) Pandemic Influenza Virus

(2011) Bo Shu et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Current Best Practices for Respiratory Virus Testing

(2011) C. C. Ginocchio et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Gene Expression Signatures Diagnose Influenza and Other Symptomatic Respiratory Viral Infections in Humans

(2009) Aimee K. Zaas et al.   Cell Host & Microbe

Cytospin-Enhanced Immunofluorescence and Impact of Sample Quality on Detection of Novel Swine Origin (H1N1) Influenza Virus

(2009) Marie L. Landry et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identification of Respiratory Viruses in Asymptomatic Subjects

(2008) Tuomas Jartti et al.   PEDIATRIC INFECTIOUS DISEASE JOURNAL