Fine-tuning timing: natural variation informs the mechanistic basis of the switch to flowering in Arabidopsis thaliana

Divergence of annual and perennial species in the Brassicaceae and the contribution of cis-acting variation at FLC orthologues

(2017) C. Kiefer et al.   MOLECULAR ECOLOGY

Multi-layered Regulation of SPL15 and Cooperation with SOC1 Integrate Endogenous Flowering Pathways at the Arabidopsis Shoot Meristem

(2016) Youbong Hyun et al.   DEVELOPMENTAL CELL

From the laboratory to the field: assaying histone methylation at FLOWERING LOCUS C in naturally growing Arabidopsis halleri

(2016) Haruki Nishio et al.   GENES & GENETIC SYSTEMS

ABA-dependent control ofGIGANTEAsignalling enables drought escape via up-regulation ofFLOWERING LOCUS TinArabidopsis thaliana

(2016) Matteo Riboni et al.   JOURNAL OF EXPERIMENTAL BOTANY

A G-Rich Motif in the lncRNA Braveheart Interacts with a Zinc-Finger Transcription Factor to Specify the Cardiovascular Lineage

(2016) Zhihong Xue et al.   MOLECULAR CELL

Rapid genome-wide evolution in Brassica rapa populations following drought revealed by sequencing of ancestral and descendant gene pools

(2016) Steven J. Franks et al.   MOLECULAR ECOLOGY

A cis cold memory element and a trans epigenome reader mediate Polycomb silencing of FLC by vernalization in Arabidopsis

(2016) Wenya Yuan et al.   NATURE GENETICS

Arabidopsis DNA polymerase ϵ recruits components of Polycomb repressor complex to mediate epigenetic gene silencing

(2016) Iván del Olmo et al.   NUCLEIC ACIDS RESEARCH

Altitudinal and climatic associations of seed dormancy and flowering traits evidence adaptation of annual life cycle timing inArabidopsis thaliana

(2016) Deborah S. Vidigal et al.   PLANT CELL AND ENVIRONMENT

Nucleotide polymorphism affectingFLCexpression underpins heading date variation in horticultural brassicas

(2016) Judith A. Irwin et al.   PLANT JOURNAL

A Flowering Locus C Homolog Is a Vernalization-Regulated Repressor in Brachypodium and Is Cold Regulated in Wheat

(2016) Neha Sharma et al.   PLANT PHYSIOLOGY

Habitat-Associated Life History and Stress-Tolerance Variation inArabidopsis arenosa

(2016) Pierre Baduel et al.   PLANT PHYSIOLOGY

Physical coupling of activation and derepression activities to maintain an active transcriptional state atFLC

(2016) Hongchun Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabidopsis transcriptional repressor VAL1 triggers Polycomb silencing at FLC during vernalization

(2016) Julia I. Qüesta et al.   SCIENCE

Mutually exclusive sense–antisense transcription at FLC facilitates environmentally induced gene repression

(2016) Stefanie Rosa et al.   Nature Communications

COOLAIR Antisense RNAs Form Evolutionarily Conserved Elaborate Secondary Structures

(2016) Emily J. Hawkes et al.   Cell Reports

Identification of Polymorphisms Associated with Drought Adaptation QTL in Brassica napus by Resequencing

(2016) Richard S. Fletcher et al.   G3-Genes Genomes Genetics

Phenotypic evolution through variation in splicing of the noncoding RNACOOLAIR

(2015) Peijin Li et al.   GENES & DEVELOPMENT

The link between flowering time and stress tolerance

(2015) Kemal Kazan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Dormancy-associated MADS-box genes and microRNAs jointly control dormancy transition in pear (Pyrus pyrifoliawhite pear group) flower bud

(2015) Qingfeng Niu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Resolution of Brassicaceae Phylogeny Using Nuclear Genes Uncovers Nested Radiations and Supports Convergent Morphological Evolution

(2015) Chien-Hsun Huang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Tuning growth cycles ofBrassicacrops via natural antisense transcripts ofBrFLC

(2015) Xiaorong Li et al.   PLANT BIOTECHNOLOGY JOURNAL

Light-Activated Phytochrome A and B Interact with Members of the SPA Family to Promote Photomorphogenesis in Arabidopsis by Reorganizing the COP1/SPA Complex

(2015) David J. Sheerin et al.   PLANT CELL

Flowering Locus C’s Lessons: Conserved Chromatin Switches Underpinning Developmental Timing and Adaptation

(2015) Jo Hepworth et al.   PLANT PHYSIOLOGY

Quantitative regulation ofFLCvia coordinated transcriptional initiation and elongation

(2015) Zhe Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of theVERNALIZATION 4gene reveals the origin of spring growth habit in ancient wheats from South Asia

(2015) Nestor Kippes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Vernalizing cold is registered digitally atFLC

(2015) Andrew Angel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

"Missing" G x E Variation Controls Flowering Time in Arabidopsis thaliana

(2015) Eriko Sasaki et al.   PLoS Genetics

Modulation of Ambient Temperature-Dependent Flowering in Arabidopsis thaliana by Natural Variation of FLOWERING LOCUS M

(2015) Ulrich Lutz et al.   PLoS Genetics

Antagonistic Roles for H3K36me3 and H3K27me3 in the Cold-Induced Epigenetic Switch at Arabidopsis FLC

(2014) Hongchun Yang et al.   CURRENT BIOLOGY

MultipleFLChaplotypes defined by independentcis-regulatory variation underpin life history diversity inArabidopsis thaliana

(2014) Peijin Li et al.   GENES & DEVELOPMENT

QTL analysis of root morphology, flowering time, and yield reveals trade-offs in response to drought in Brassica napus

(2014) Richard S. Fletcher et al.   JOURNAL OF EXPERIMENTAL BOTANY

Functional Consequences of Splicing of the Antisense Transcript COOLAIR on FLC Transcription

(2014) Sebastian Marquardt et al.   MOLECULAR CELL

Flowering time QTL in natural populations ofArabidopsis thalianaand implications for their adaptive value

(2014) Emily L. Dittmar et al.   MOLECULAR ECOLOGY

Epigenetic reprogramming that prevents transgenerational inheritance of the vernalized state

(2014) Pedro Crevillén et al.   NATURE

Gene Regulatory Variation Mediates Flowering Responses to Vernalization along an Altitudinal Gradient in Arabidopsis

(2014) L. Suter et al.   PLANT PHYSIOLOGY

AntisenseCOOLAIRmediates the coordinated switching of chromatin states atFLCduring vernalization

(2014) Tibor Csorba et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Antisense-mediated FLC transcriptional repression requires the P-TEFb transcription elongation factor

(2014) Z.-W. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Physical clustering of FLC alleles during Polycomb-mediated epigenetic silencing in vernalization

(2013) S. Rosa et al.   GENES & DEVELOPMENT

Temperature-dependent regulation of flowering by antagonistic FLM variants

(2013) David Posé et al.   NATURE

A new world of Polycombs: unexpected partnerships and emerging functions

(2013) Yuri B. Schwartz et al.   NATURE REVIEWS GENETICS

Promiscuous RNA binding by Polycomb repressive complex 2

(2013) Chen Davidovich et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Cold Signaling Attenuator HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Activates FLOWERING LOCUS C Transcription via Chromatin Remodeling under Short-Term Cold Stress in Arabidopsis

(2013) J.-H. Jung et al.   PLANT CELL

Genome-wide expression profiles of seasonal bud dormancy at four critical stages in Japanese apricot

(2013) Wenjun Zhong et al.   PLANT MOLECULAR BIOLOGY

GIGANTEA Enables Drought Escape Response via Abscisic Acid-Dependent Activation of the Florigens and SUPPRESSOR OF OVEREXPRESSION OF CONSTANS1

(2013) M. Riboni et al.   PLANT PHYSIOLOGY

Pleiotropy of FRIGIDA enhances the potential for multivariate adaptation

(2013) J. T. Lovell et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Regulation of Temperature-Responsive Flowering by MADS-Box Transcription Factor Repressors

(2013) J. H. Lee et al.   SCIENCE

Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana

(2013) V. Wahl et al.   SCIENCE

Functional alleles of the flowering time regulator FRIGIDA in the Brassica oleracea genome

(2012) Judith A Irwin et al.   BMC PLANT BIOLOGY

A Tourist-like MITE insertion in the upstream region of the BnFLC.A10 gene is associated with vernalization requirement in rapeseed (Brassica napus L.)

(2012) Jinna Hou et al.   BMC PLANT BIOLOGY

The catalytic subunit of Arabidopsis DNA polymerase   ensures stable maintenance of histone modification

(2012) Y. Hyun et al.   DEVELOPMENT

Transcription factor PIF4 controls the thermosensory activation of flowering

(2012) S. Vinod Kumar et al.   NATURE

Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel

(2012) Matthew W Horton et al.   NATURE GENETICS

The genetic basis of flowering responses to seasonal cues

(2012) Fernando Andrés et al.   NATURE REVIEWS GENETICS

Role of vernalization and of duplicatedFLOWERING LOCUS Cin the perennialArabidopsis lyrata

(2012) Ulla Kemi et al.   NEW PHYTOLOGIST

Reciprocal transplants demonstrate strong adaptive differentiation of the model organism Arabidopsis thaliana in its native range

(2012) Jon Ågren et al.   NEW PHYTOLOGIST

Among- and within-population variation in flowering time of IberianArabidopsis thalianaestimated in field and glasshouse conditions

(2012) Belén Méndez-Vigo et al.   NEW PHYTOLOGIST

Natural variation in the temperature range permissive for vernalization in accessions ofArabidopsis thaliana

(2012) AMANDA C. WOLLENBERG et al.   PLANT CELL AND ENVIRONMENT

Novel natural alleles at FLC and LVR loci account for enhanced vernalization responses in Arabidopsis thaliana

(2012) EDUARDO SÁNCHEZ-BERMEJO et al.   PLANT CELL AND ENVIRONMENT

Quantitative Modulation of Polycomb Silencing Underlies Natural Variation in Vernalization

(2012) V. Coustham et al.   SCIENCE

FKF1 Conveys Timing Information for CONSTANS Stabilization in Photoperiodic Flowering

(2012) Y. H. Song et al.   SCIENCE

PEP1 of Arabis alpina Is Encoded by Two Overlapping Genes That Contribute to Natural Genetic Variation in Perennial Flowering

(2012) Maria C. Albani et al.   PLoS Genetics

Blue Light-Dependent Interaction of CRY2 with SPA1 Regulates COP1 activity and Floral Initiation in Arabidopsis

(2011) Zecheng Zuo et al.   CURRENT BIOLOGY

Genetic Architecture of Flowering-Time Variation inArabidopsis thaliana

(2011) Patrice A. Salomé et al.   GENETICS

Expressional regulation of PpDAM5 and PpDAM6, peach (Prunus persica) dormancy-associated MADS-box genes, by low temperature and dormancy-breaking reagent treatment

(2011) H. Yamane et al.   JOURNAL OF EXPERIMENTAL BOTANY

The floral repressor BROTHER OF FT AND TFL1 (BFT) modulates flowering initiation under high salinity in Arabidopsis

(2011) Jae Yong Ryu et al.   MOLECULES AND CELLS

A Polycomb-based switch underlying quantitative epigenetic memory

(2011) Andrew Angel et al.   NATURE

Histone modifications and expression of DAM6 gene in peach are modulated during bud dormancy release in a cultivar-dependent manner

(2011) Carmen Leida et al.   NEW PHYTOLOGIST

The FRIGIDA Complex Activates Transcription ofFLC, a Strong Flowering Repressor inArabidopsis, by Recruiting Chromatin Modification Factors

(2011) Kyuha Choi et al.   PLANT CELL

Altitudinal and Climatic Adaptation Is Mediated by Flowering Traits and FRI, FLC, and PHYC Genes in Arabidopsis

(2011) B. Mendez-Vigo et al.   PLANT PHYSIOLOGY

Functional and Expressional Analyses of PmDAM Genes Associated with Endodormancy in Japanese Apricot

(2011) Ryuta Sasaki et al.   PLANT PHYSIOLOGY

Vernalization-Repression of Arabidopsis FLC Requires Promoter Sequences but Not Antisense Transcripts

(2011) Chris A. Helliwell et al.   PLoS One

Major-Effect Alleles at Relatively Few Loci Underlie Distinct Vernalization and Flowering Variation in Arabidopsis Accessions

(2011) Amy Strange et al.   PLoS One

MSI4/FVE interacts with CUL4-DDB1 and a PRC2-like complex to control epigenetic regulation of flowering time in Arabidopsis

(2011) M. Pazhouhandeh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabidopsis Homologs of Retinoblastoma-Associated Protein 46/48 Associate with a Histone Deacetylase to Act Redundantly in Chromatin Silencing

(2011) Xiaofeng Gu et al.   PLoS Genetics

The Spen Family Protein FPA Controls Alternative Cleavage and Polyadenylation of RNA

(2010) Csaba Hornyik et al.   DEVELOPMENTAL CELL

Diversity of plant life cycles is generated by dynamic epigenetic regulation in response to vernalization

(2010) Akiko Satake   JOURNAL OF THEORETICAL BIOLOGY

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

(2010) Susanna Atwell et al.   NATURE

Gene expression of DAM5 and DAM6 is suppressed by chilling temperatures and inversely correlated with bud break rate

(2010) S. Jiménez et al.   PLANT MOLECULAR BIOLOGY

ODDSOC2 Is a MADS Box Floral Repressor That Is Down-Regulated by Vernalization in Temperate Cereals

(2010) A. G. Greenup et al.   PLANT PHYSIOLOGY

Make hay when the sun shines: The role of MADS-box genes in temperature-dependant seasonal flowering responses

(2010) Megan N. Hemming et al.   PLANT SCIENCE

Robust control of the seasonal expression of the Arabidopsis FLC gene in a fluctuating environment

(2010) S. Aikawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Vernalization-Mediated Epigenetic Silencing by a Long Intronic Noncoding RNA

(2010) J. B. Heo et al.   SCIENCE

Linkage and Association Mapping of Arabidopsis thaliana Flowering Time in Nature

(2010) Benjamin Brachi et al.   PLoS Genetics

miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana

(2009) Jia-Wei Wang et al.   CELL

Splicing Variation at a FLOWERING LOCUS C Homeolog Is Associated With Flowering Time Variation in the Tetraploid Capsella bursa-pastoris

(2009) T. Slotte et al.   GENETICS

Candidate Gene Association Mapping of Arabidopsis Flowering Time

(2009) I. M. Ehrenreich et al.   GENETICS

Unraveling the Complex Trait of Crop Yield With Quantitative Trait Loci Mapping in Brassica napus

(2009) J. Shi et al.   GENETICS

Cis-regulatory Changes at FLOWERING LOCUS T Mediate Natural Variation in Flowering Responses of Arabidopsis thaliana

(2009) C. Schwartz et al.   GENETICS

Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target

(2009) Szymon Swiezewski et al.   NATURE

PEP1 regulates perennial flowering in Arabis alpina

(2009) Renhou Wang et al.   NATURE

What Has Natural Variation Taught Us about Plant Development, Physiology, and Adaptation?

(2009) C. Alonso-Blanco et al.   PLANT CELL

Establishment of the Winter-Annual Growth Habit via FRIGIDA-Mediated Histone Methylation at FLOWERING LOCUS C in Arabidopsis

(2009) D. Jiang et al.   PLANT CELL

FRIGIDA Delays Flowering in Arabidopsis via a Cotranscriptional Mechanism Involving Direct Interaction with the Nuclear Cap-Binding Complex

(2009) N. Geraldo et al.   PLANT PHYSIOLOGY

Vernalization-induced flowering in cereals is associated with changes in histone methylation at the VERNALIZATION1 gene

(2009) S. N. Oliver et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Targeted 3' Processing of Antisense Transcripts Triggers Arabidopsis FLC Chromatin Silencing

(2009) F. Liu et al.   SCIENCE

Effects of Genetic Perturbation on Seasonal Life History Plasticity

(2009) A. M. Wilczek et al.   SCIENCE

The Balance between CONSTANS and TEMPRANILLO Activities Determines FT Expression to Trigger Flowering

(2008) Cristina Castillejo et al.   CURRENT BIOLOGY

A Repressor Complex Governs the Integration of Flowering Signals in Arabidopsis

(2008) Dan Li et al.   DEVELOPMENTAL CELL

Arabidopsis COP1 shapes the temporal pattern of CO accumulation conferring a photoperiodic flowering response

(2008) Seonghoe Jang et al.   EMBO JOURNAL

Quantitative Trait Loci Mapping in Five New Large Recombinant Inbred Line Populations of Arabidopsis thaliana Genotyped With Consensus Single-Nucleotide Polymorphism Markers

(2008) M. Simon et al.   GENETICS

A molecular framework for light and gibberellin control of cell elongation

(2008) Miguel de Lucas et al.   NATURE

Coordinated regulation of Arabidopsis thaliana development by light and gibberellins

(2008) Suhua Feng et al.   NATURE

A PHD-Polycomb Repressive Complex 2 triggers the epigenetic silencing of FLC during vernalization

(2008) F. De Lucia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequencing and annotation of the evergrowing locus in peach [Prunus persica (L.) Batsch] reveals a cluster of six MADS-box transcription factors as candidate genes for regulation of terminal bud formation

(2008) Douglas Gary Bielenberg et al.   Tree Genetics & Genomes