Y chromosome palindromes and gene conversion

Forensic data and microvariant sequence characterization of 27 Y-STR loci analyzed in four Eastern African countries

(2017) Giuseppe Iacovacci et al.   Forensic Science International-Genetics

The Eutherian Pseudoautosomal Region

(2016) Terje Raudsepp et al.   CYTOGENETIC AND GENOME RESEARCH

A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y

(2016) Marta Tomaszkiewicz et al.   GENOME RESEARCH

Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences

(2016) G David Poznik et al.   NATURE GENETICS

Evidence of extensive non-allelic gene conversion among LTR elements in the human genome

(2016) Beniamino Trombetta et al.   Scientific Reports

The pig X and Y Chromosomes: structure, sequence, and evolution

(2015) Benjamin M. Skinner et al.   GENOME RESEARCH

A recent bottleneck of Y chromosome diversity coincides with a global change in culture

(2015) Monika Karmin et al.   GENOME RESEARCH

The Y-chromosome point mutation rate in humans

(2015) Agnar Helgason et al.   NATURE GENETICS

Regional Differences in the Accumulation of SNPs on the Male-Specific Portion of the Human Y Chromosome Replicate Autosomal Patterns: Implications for Genetic Dating

(2015) Beniamino Trombetta et al.   PLoS One

Large-scale recent expansion of European patrilineages shown by population resequencing

(2015) Chiara Batini et al.   Nature Communications

Sequencing the Mouse Y Chromosome Reveals Convergent Gene Acquisition and Amplification on Both Sex Chromosomes

(2014) Y.Q. Shirleen Soh et al.   CELL

An unbiased resource of novel SNP markers provides a new chronology for the human Y chromosome and reveals a deep phylogenetic structure in Africa

(2014) R. Scozzari et al.   GENOME RESEARCH

Gene Conversion Violates the Stepwise Mutation Model for Microsatellites in Y-Chromosomal Palindromic Repeats

(2014) Patricia Balaresque et al.   HUMAN MUTATION

Inter- and Intraspecies Phylogenetic Analyses Reveal Extensive X–Y Gene Conversion in the Evolution of Gametologous Sequences of Human Sex Chromosomes

(2014) Beniamino Trombetta et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Y-Chromosome Tree Bursts into Leaf: 13,000 High-Confidence SNPs Covering the Majority of Known Clades

(2014) P. Hallast et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators

(2014) Daniel W. Bellott et al.   NATURE

Comparative analysis of mammalian Y chromosomes illuminates ancestral structure and lineage-specific evolution

(2013) G. Li et al.   GENOME RESEARCH

Independent specialization of the human and mouse X chromosomes for the male germ line

(2013) Jacob L Mueller et al.   NATURE GENETICS

Y-chromosome evolution: emerging insights into processes of Y-chromosome degeneration

(2013) Doris Bachtrog   NATURE REVIEWS GENETICS

Male-specific region of the bovine Y chromosome is gene rich with a high transcriptomic activity in testis development

(2013) T.-C. Chang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Low-Pass DNA Sequencing of 1200 Sardinians Reconstructs European Y-Chromosome Phylogeny

(2013) P. Francalacci et al.   SCIENCE

Sequencing Y Chromosomes Resolves Discrepancy in Time to Common Ancestor of Males Versus Females

(2013) G. D. Poznik et al.   SCIENCE

Phylogenetic applications of whole Y-chromosome sequences and the Near Eastern origin of Ashkenazi Levites

(2013) Siiri Rootsi et al.   Nature Communications

Recombination Dynamics of a Human Y-Chromosomal Palindrome: Rapid GC-Biased Gene Conversion, Multi-kilobase Conversion Tracts, and Rare Inversions

(2013) Pille Hallast et al.   PLoS Genetics

AZFc Deletions and Spermatogenic Failure: A Population-Based Survey of 20,000 Y Chromosomes

(2012) Steven G. Rozen et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A synaptonemal complex-derived mechanism for meiotic segregation precedes the evolutionary loss of homology between sex chromosomes in arvicolid mammals

(2012) Roberto de la Fuente et al.   CHROMOSOMA

Analysis of compensatory substitution and gene evolution on the MAGEA/CSAG-palindrome of the primate X chromosomes

(2012) Yanjiao Qi et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Chromosome-Wide Gene Silencing Initiates Y Degeneration in Drosophila

(2012) Qi Zhou et al.   CURRENT BIOLOGY

Molecular and Clinical Characteristics of 26 Cases with Structural Y Chromosome Aberrations

(2012) J.-W. Kim et al.   CYTOGENETIC AND GENOME RESEARCH

A calibrated human Y-chromosomal phylogeny based on resequencing

(2012) W. Wei et al.   GENOME RESEARCH

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes

(2012) Jennifer F. Hughes et al.   NATURE

Human Male Meiotic Sex Chromosome Inactivation

(2012) Marieke de Vries et al.   PLoS One

ZNF280BY and ZNF280AY: autosome derived Y-chromosome gene families in Bovidae

(2011) Yang Yang et al.   BMC GENOMICS

Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution

(2011) V. J. Murtagh et al.   GENOME RESEARCH

A Large Palindrome With Interchromosomal Gene Duplications in the Pericentromeric Region of the D. melanogaster Y Chromosome

(2011) M. Mendez-Lago et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Jurassic eutherian mammal and divergence of marsupials and placentals

(2011) Zhe-Xi Luo et al.   NATURE

A W-linked palindrome and gene conversion in New World sparrows and blackbirds

(2010) Jamie K. Davis et al.   CHROMOSOME RESEARCH

Gene Duplication, Gene Conversion and the Evolution of the Y Chromosome

(2010) Tim Connallon et al.   GENETICS

Can Intra-Y Gene Conversion Oppose the Degeneration of the Human Y Chromosome?: A Simulation Study

(2010) G. A. B. Marais et al.   Genome Biology and Evolution

Extensive Gene Conversion Drives the Concerted Evolution of Paralogous Copies of the SRY Gene in European Rabbits

(2010) A. Geraldes et al.   MOLECULAR BIOLOGY AND EVOLUTION

Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content

(2010) Jennifer F. Hughes et al.   NATURE

The evolution of gene duplications: classifying and distinguishing between models

(2010) Hideki Innan et al.   NATURE REVIEWS GENETICS

Gene Conversion between the X Chromosome and the Male-Specific Region of the Y Chromosome at a Translocation Hotspot

(2009) Zoë H. Rosser et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes

(2009) Laurent Duret et al.   Annual Review of Genomics and Human Genetics

Isodicentric Y Chromosomes and Sex Disorders as Byproducts of Homologous Recombination that Maintains Palindromes

(2009) Julian Lange et al.   CELL

Physical mapping of the elephant X chromosome: conservation of gene order over 105 million years

(2009) Claudia Leticia Rodríguez Delgado et al.   CHROMOSOME RESEARCH

Footprints of X-to-Y Gene Conversion in Recent Human Evolution

(2009) B. Trombetta et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Temporal Dynamics of Processes Underlying Y Chromosome Degeneration

(2008) D. Bachtrog   GENETICS

Muller's Ratchet and the Degeneration of Y Chromosomes: A Simulation Study

(2008) J. Engelstadter   GENETICS

The Evolutionary Rate of Duplicated Genes Under Concerted Evolution

(2008) S. Mano et al.   GENETICS

Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes

(2008) F. Veyrunes et al.   GENOME RESEARCH

Dynamic nature of the proximalAZFcregion of the human Y chromosome: multiple independent deletion and duplication events revealed by microsatellite analysis

(2008) Patricia Balaresque et al.   HUMAN MUTATION

Identification of new breakpoints in AZFb and AZFc

(2008) Paula Costa et al.   MOLECULAR HUMAN REPRODUCTION

The mouse X chromosome is enriched for multicopy testis genes showing postmeiotic expression

(2008) Jacob L Mueller et al.   NATURE GENETICS