Contemporary nucleic acid-based molecular techniques for detection, identification, and characterization of Bifidobacterium

Development and Use oftufGene–Based Primers for the Multiplex PCR Detection of Lactobacillus acidophilus, Lactobacillus casei Group, Lactobacillus delbrueckii, and Bifidobacterium longum in Commercial Dairy Products

(2016) SEN-JE SHEU et al.   JOURNAL OF FOOD PROTECTION

Use of denaturing gradient gel electrophoresis to detect Actinobacteria associated with the human faecal microbiota

(2013) Lesley Hoyles et al.   ANAEROBE

Quantitative Detection of Viable Bifidobacterium bifidum BF-1 Cells in Human Feces by Using Propidium Monoazide and Strain-Specific Primers

(2013) Junji Fujimoto et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Strain-Specific Identification ofBifidobacterium bifidumOLB6378 by PCR

(2013) Takayuki TOSHIMITSU et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Detection and characterization of Bifidobacterium crudilactis and B. mongoliense able to grow during the manufacturing process of French raw milk cheeses

(2013) Veronique Delcenserie et al.   BMC MICROBIOLOGY

Identification of species belonging to the Bifidobacterium genus by PCR-RFLP analysis of a hsp60 gene fragment

(2013) Loredana Baffoni et al.   BMC MICROBIOLOGY

Sources, isolation, characterisation and evaluation of probiotics

(2013) Luis Fontana et al.   BRITISH JOURNAL OF NUTRITION

Molecular dialogue between the human gut microbiota and the host: a Lactobacillus and Bifidobacterium perspective

(2013) Francesca Turroni et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

A novel combined approach based on HTF-Microbi.Array and qPCR for a reliable characterization of theBifidobacterium-dominated gut microbiota of breast-fed infants

(2013) Manuela Centanni et al.   FEMS MICROBIOLOGY LETTERS

Effect of probiotic species on irritable bowel syndrome symptoms: A bring up to date meta-analysis

(2013) María Ortiz-Lucas et al.   REVISTA ESPANOLA DE ENFERMEDADES DIGESTIVAS

Probiotic supplementation decreases intestinal transit time: Meta-analysis of randomized controlled trials

(2013) Larry E Miller   WORLD JOURNAL OF GASTROENTEROLOGY

Use of bifidobacterial specific terminal restriction fragment length polymorphisms to complement next generation sequence profiling of infant gut communities

(2012) Zachery T. Lewis et al.   ANAEROBE

New Molecular Quantitative PCR Assay for Detection of Host-Specific Bifidobacteriaceae Suitable for Microbial Source Tracking

(2012) Marta Gómez-Doñate et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Quantification of Human Fecal Bifidobacterium Species by Use of Quantitative Real-Time PCR Analysis Targeting thegroELGene

(2012) Jana Junick et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

High taxonomic level fingerprint of the human intestinal microbiota by Ligase Detection Reaction - Universal Array approach

(2012) Marco Candela et al.   BMC MICROBIOLOGY

Molecular methods for pathogen and microbial community detection and characterization: Current and potential application in diagnostic microbiology

(2012) Christopher D. Sibley et al.   INFECTION GENETICS AND EVOLUTION

Probiotics for the Prevention and Treatment of Antibiotic-Associated Diarrhea

(2012) Sydne J. Newberry   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

PCR inhibitors - occurrence, properties and removal

(2012) C. Schrader et al.   JOURNAL OF APPLIED MICROBIOLOGY

Meta-Analysis of the Efficacy and Safety of Lactobacillus-containing and Bifidobacterium-containing Probiotic Compound Preparation in Helicobacter pylori Eradication Therapy

(2012) Zhen-Hua Wang et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

Comparison and evaluation of molecular methods used for identification and discrimination of lactic acid bacteria

(2012) Károly Pál et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

A Meta-Analysis of Probiotic Efficacy for Gastrointestinal Diseases

(2012) Marina L. Ritchie et al.   PLoS One

Comparative quantification of human intestinal bacteria based on cPCR and LDR/LCR

(2012) Zhou-Rui Tang   WORLD JOURNAL OF GASTROENTEROLOGY

Bifidobacterial Diversity and the Development of New Microbial Source Tracking Indicators

(2011) Elisenda Ballesté et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transmission of Intestinal Bifidobacterium longum subsp.longumStrains from Mother to Infant, Determined by Multilocus Sequencing Typing and Amplified Fragment Length Polymorphism

(2011) Hiroshi Makino et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Global Genome Transcription Profiling of Bifidobacterium bifidum PRL2010 underIn VitroConditions and Identification of Reference Genes for Quantitative Real-Time PCR

(2011) Francesca Turroni et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Conservation of structure and mechanism within the transaldolase enzyme family

(2011) Anne K. Samland et al.   FEBS Journal

Recent advances in quantitative PCR (qPCR) applications in food microbiology

(2011) Florence Postollec et al.   FOOD MICROBIOLOGY

Progress in genomics, metabolism and biotechnology of bifidobacteria

(2011) Michelle Cronin et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Efficiency of PCR-based methods in discriminating Bifidobacterium longum ssp. longum and Bifidobacterium longum ssp. infantis strains of human origin

(2011) Dagmar Šrůtková et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Genotyping of Bifidobacterium longum subsp. longum strains by multilocus variable number of tandem repeat analysis

(2011) Sébastien Matamoros et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Longitudinal analysis and genotyping of infant dominant bifidobacterial populations

(2011) J. Aires et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Dix ans de diagnostic génomique viral : leçons et perspectives

(2011) P. Morel   TRANSFUSION CLINIQUE ET BIOLOGIQUE

Probiotics

(2010) N. T. Williams   AMERICAN JOURNAL OF HEALTH-SYSTEM PHARMACY

Molecular Genetic Study of Species and Strain Variability in Bifidobacteria Population in Intestinal Microflora of Breast-Fed Infants and Their Mothers

(2010) E. V. Kulagina et al.   BULLETIN OF EXPERIMENTAL BIOLOGY AND MEDICINE

High-throughput method for comparative analysis of denaturing gradient gel electrophoresis profiles from human fecal samples reveals significant increases in two bifidobacterial species after inulin-type prebiotic intake

(2010) Marie Joossens et al.   FEMS MICROBIOLOGY ECOLOGY

Pulsed field gel electrophoresis: A review of application and interpretation in the molecular epidemiology of infectious disease

(2010) Richard V. Goering   INFECTION GENETICS AND EVOLUTION

Identification and quantification of viable Bifidobacterium breve strain Yakult in human faeces by using strain-specific primers and propidium monoazide

(2010) J. Fujimoto et al.   JOURNAL OF APPLIED MICROBIOLOGY

Complete Genome Sequence of Probiotic Bifidobacterium animalis subsp. lactis Strain V9

(2010) Z. Sun et al.   JOURNAL OF BACTERIOLOGY

Rapid and direct quantitative detection of viable bifidobacteria in probiotic yogurt by combination of ethidium monoazide and real-time PCR using a molecular beacon approach

(2010) XC Meng et al.   JOURNAL OF DAIRY RESEARCH

Molecular approaches for identification and characterization of lactic acid bacteria

(2010) Dheeraj MOHANIA et al.   Journal of Digestive Diseases

Use of Tuf Gene-Based Primers for the PCR Detection of Probiotic Bifidobacterium Species and Enumeration of Bifidobacteria in Fermented Milk by Cultural and Quantitative Real-Time PCR Methods

(2010) Sen-Je Sheu et al.   JOURNAL OF FOOD SCIENCE

Comparison of different standards for real-time PCR-based absolute quantification

(2010) S. Dhanasekaran et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Rapid Determination of the Bacterial Composition of Commercial Probiotic Products by Terminal Restriction Fragment Length Polymorphism Analysis

(2010) Angela Marcobal et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Molecular Characterization of Intestinal Microbiota in Infants Fed With Soymilk

(2010) Giorgio Piacentini et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Effect of Bifidobacterium animalis subsp lactis Supplementation in Preterm Infants: A Systematic Review of Randomized Controlled Trials

(2010) Hania Szajewska et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Remission induction and maintenance effect of probiotics on ulcerative colitis: A meta-analysis

(2010) Li-Xuan Sang   WORLD JOURNAL OF GASTROENTEROLOGY

Strain-Specific Genotyping of Bifidobacterium animalis subsp. lactis by Using Single-Nucleotide Polymorphisms, Insertions, and Deletions

(2009) E. P. Briczinski et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A decade of improvements in quantification of gene expression and internal standard selection

(2009) Olivier Thellin et al.   BIOTECHNOLOGY ADVANCES

Basic Concepts of Microarrays and Potential Applications in Clinical Microbiology

(2009) M. B. Miller et al.   CLINICAL MICROBIOLOGY REVIEWS

Development of a real-time RT-PCR method for enumeration of viable Bifidobacterium longum cells in different morphologies

(2009) Sebastian Reimann et al.   FOOD MICROBIOLOGY

Molecular typing methodologies for microbial source tracking and epidemiological investigations of Gram-negative bacterial foodborne pathogens☆

(2009) Steven L. Foley et al.   INFECTION GENETICS AND EVOLUTION

Comparative study of a new quantitative real-time PCR targeting the xylulose-5-phosphate/fructose-6-phosphate phosphoketolase bifidobacterial gene (xfp) in faecal samples with two fluorescence in situ hybridization methods

(2009) V. Cleusix et al.   JOURNAL OF APPLIED MICROBIOLOGY

DNA, RNA, and Protein Extraction: The Past and The Present

(2009) Siun Chee Tan et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

The Bifidobacterium dentium Bd1 Genome Sequence Reflects Its Genetic Adaptation to the Human Oral Cavity

(2009) Marco Ventura et al.   PLoS Genetics

Use of specific primers based on the 16S–23S internal transcribed spacer (ITS) region for the screening Bifidobacterium adolescentis in yogurt products and human stool samples

(2008) Cheng-Chih Tsai et al.   ANAEROBE

Isolation of Bifidobacteria from Breast Milk and Assessment of the Bifidobacterial Population by PCR-Denaturing Gradient Gel Electrophoresis and Quantitative Real-Time PCR

(2008) R. Martin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Detection of Bifidobacterium animalis subsp. lactis (Bb12) in the Intestine after Feeding of Sows and Their Piglets

(2008) G. Solano-Aguilar et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities

(2008) Ursel M. E. Schütte et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Application of Several Molecular Techniques to Study Numerically PredominantBifidobacteriumspp. andBacteroidalesOrder Strains in the Feces of Healthy Children

(2008) Andrei N. SHKOPOROV et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

PCR and real-time PCR primers developed for detection and identification of Bifidobacterium thermophilum in faeces

(2008) Sophie Mathys et al.   BMC MICROBIOLOGY

Molecular Genetic Basis of Ribotyping

(2008) V. Bouchet et al.   CLINICAL MICROBIOLOGY REVIEWS

Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology

(2008) Cindy J. Smith et al.   FEMS MICROBIOLOGY ECOLOGY

RAPD and rep-PCR fingerprinting for characterization of Bifidobacterium species

(2008) J. Křížová et al.   FOLIA MICROBIOLOGICA

A Bifidobacterium mixed-species microarray for high resolution discrimination between intestinal bifidobacteria

(2008) Rolf J. Boesten et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Detection of canine adenoviral infections in urine and faeces by the polymerase chain reaction

(2008) Uttara Chaturvedi et al.   JOURNAL OF VIROLOGICAL METHODS

Quantification of Bifidobacterium spp. and Lactobacillus spp. in rat fecal samples by real-time PCR

(2006) Jean-Marc Delroisse et al.   MICROBIOLOGICAL RESEARCH