Microbial diversity and iron oxidation at Okuoku-hachikurou Onsen, a Japanese hot spring analog of Precambrian iron formations

On the origins of oxygenic photosynthesis and aerobic respiration in Cyanobacteria

(2017) Rochelle M. Soo et al.   SCIENCE

Evolution of Oxygenic Photosynthesis

(2016) Woodward W. Fischer et al.   Annual Review of Earth and Planetary Sciences

Continental smokers couple mantle degassing and distinctive microbiology within continents

(2016) Laura J. Crossey et al.   EARTH AND PLANETARY SCIENCE LETTERS

The role of microaerophilic Fe-oxidizing micro-organisms in producing banded iron formations

(2016) C. S. Chan et al.   Geobiology

Microbial Fe(III) oxide reduction potential in Chocolate Pots hot spring, Yellowstone National Park

(2016) N. W. Fortney et al.   Geobiology

Crown group Oxyphotobacteria postdate the rise of oxygen

(2016) P. M. Shih et al.   Geobiology

Gene Sequencing-Based Analysis of Microbial-Mat Morphotypes, Caicos Platform, British West Indies

(2016) Elizabeth Trembath-Reichert et al.   JOURNAL OF SEDIMENTARY RESEARCH

Oxygen produced by cyanobacteria in simulated Archaean conditions partly oxidizes ferrous iron but mostly escapes—conclusions about early evolution

(2016) Susanne Rantamäki et al.   PHOTOSYNTHESIS RESEARCH

Dust to dust: Evidence for the formation of “primary” hematite dust in banded iron formations via oxidation of iron silicate nanoparticles

(2016) Birger Rasmussen et al.   PRECAMBRIAN RESEARCH

The Dark Side of the Mushroom Spring Microbial Mat: Life in the Shadow of Chlorophototrophs. I. Microbial Diversity Based on 16S rRNA Gene Amplicons and Metagenomic Sequencing

(2016) Vera Thiel et al.   Frontiers in Microbiology

Metagenomic analysis of a high carbon dioxide subsurface microbial community populated by chemolithoautotrophs and bacteria and archaea from candidate phyla

(2015) Joanne B. Emerson et al.   ENVIRONMENTAL MICROBIOLOGY

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

An authigenic origin for Precambrian greenalite: Implications for iron formation and the chemistry of ancient seawater

(2015) Nicholas J. Tosca et al.   GEOLOGICAL SOCIETY OF AMERICA BULLETIN

Precipitation of iron silicate nanoparticles in early Precambrian oceans marks Earth’s first iron age

(2015) Birger Rasmussen et al.   GEOLOGY

Modulation of oxygen production in Archaean oceans by episodes of Fe(II) toxicity

(2015) Elizabeth D. Swanner et al.   Nature Geoscience

Timescales of Oxygenation Following the Evolution of Oxygenic Photosynthesis

(2015) Lewis M. Ward et al.   ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES

Back from the dead; the curious tale of the predatory cyanobacteriumVampirovibrio chlorellavorus

(2015) Rochelle M. Soo et al.   PeerJ

An Expanded Genomic Representation of the Phylum Cyanobacteria

(2014) Rochelle M. Soo et al.   Genome Biology and Evolution

SQUID-SIMS is a useful approach to uncover primary signals in the Archean sulfur cycle

(2014) W. W. Fischer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hidden in plain sight: discovery of sheath-forming, iron-oxidizingZetaproteobacteriaat Loihi Seamount, Hawaii, USA

(2013) Emily J. Fleming et al.   FEMS MICROBIOLOGY ECOLOGY

Iron silicate microgranules as precursor sediments to 2.5-billion-year-old banded iron formations

(2013) Birger Rasmussen et al.   GEOLOGY

Isolation and Characterization of a Thermophilic, Obligately Anaerobic and Heterotrophic Marine Chloroflexi Bacterium from a Chloroflexi-dominated Microbial Community Associated with a Japanese Shallow Hydrothermal System, and Proposal for Thermomarinilinea lacunofontalis gen. nov., sp. nov.

(2013) Takuro Nunoura et al.   MICROBES AND ENVIRONMENTS

Genomic Analysis of Melioribacter roseus, Facultatively Anaerobic Organotrophic Bacterium Representing a Novel Deep Lineage within Bacteriodetes/Chlorobi Group

(2013) Vitaly V. Kadnikov et al.   PLoS One

Reply to Jones and Crowe: Correcting mistaken views of sedimentary geology, Mn-oxidation rates, and molecular clocks

(2013) J. E. Johnson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Manganese-oxidizing photosynthesis before the rise of cyanobacteria

(2013) J. E. Johnson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbiological processes in banded iron formation deposition

(2013) Nicole R. Posth et al.   SEDIMENTOLOGY

The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria

(2013) Sara C Di Rienzi et al.   eLife

Comparative genomics of freshwater Fe-oxidizing bacteria: implications for physiology, ecology, and systematics

(2013) David Emerson et al.   Frontiers in Microbiology

Influence of Seasonal and Geochemical Changes on the Geomicrobiology of an Iron Carbonate Mineral Water Spring

(2012) Florian Hegler et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Experimental low-grade alteration of biogenic magnetite indicates microbial involvement in generation of banded iron formations

(2012) Yi-Liang Li et al.   EARTH AND PLANETARY SCIENCE LETTERS

Characterization ofMelioribacter roseusgen. nov., sp. nov., a novel facultatively anaerobic thermophilic cellulolytic bacterium from the classIgnavibacteria, and a proposal of a novel bacterial phylumIgnavibacteriae

(2012) Olga A. Podosokorskaya et al.   ENVIRONMENTAL MICROBIOLOGY

Cyanobacterial diversity and activity in modern conical microbialites

(2012) T. Bosak et al.   Geobiology

Abiotic oxidation of Fe(II) by reactive nitrogen species in cultures of the nitrate-reducing Fe(II) oxidizerAcidovoraxsp. BoFeN1 - questioning the existence of enzymatic Fe(II) oxidation

(2012) N. Klueglein et al.   Geobiology

Ornatilinea apprima gen. nov., sp. nov., a cellulolytic representative of the class Anaerolineae

(2012) O. A. Podosokorskaya et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

‘Candidatus Thermochlorobacter aerophilum:’ an aerobic chlorophotoheterotrophic member of the phylum Chlorobi defined by metagenomics and metatranscriptomics

(2012) Zhenfeng Liu et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95T)

(2012) Hajnalka Kiss et al.   Standards in Genomic Sciences

Complete Genome of Ignavibacterium album, a Metabolically Versatile, Flagellated, Facultative Anaerobe from the Phylum Chlorobi

(2012) Zhenfeng Liu et al.   Frontiers in Microbiology

The Microbial Ferrous Wheel in a Neutral pH Groundwater Seep

(2012) Eric E. Roden et al.   Frontiers in Microbiology

Bacterial symbiosis forming laminated iron-rich deposits in Okuoku-hachikurou hot spring, Akita Prefecture, Japan

(2011) CHIZURU TAKASHIMA et al.   ISLAND ARC

Community ecology of hot spring cyanobacterial mats: predominant populations and their functional potential

(2011) Christian G Klatt et al.   ISME Journal

Hot-spring Systems Geobiology: abiotic and biotic influences on travertine formation at Mammoth Hot Springs, Yellowstone National Park, USA

(2011) BRUCE W. FOUKE   SEDIMENTOLOGY

Bioenergetic challenges of microbial iron metabolisms

(2011) Lina J. Bird et al.   TRENDS IN MICROBIOLOGY

Iron-Oxidizing Bacteria: An Environmental and Genomic Perspective

(2010) David Emerson et al.   Annual Review of Microbiology

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

MICROBIAL BIOSIGNATURES IN IRON-MINERALIZED PHOTOTROPHIC MATS AT CHOCOLATE POTS HOT SPRINGS, YELLOWSTONE NATIONAL PARK, UNITED STATES

(2010) M. N. PARENTEAU et al.   PALAIOS

Comparative genomics of green sulfur bacteria

(2010) Colin Davenport et al.   PHOTOSYNTHESIS RESEARCH

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Ignavibacterium album gen. nov., sp. nov., a moderately thermophilic anaerobic bacterium isolated from microbial mats at a terrestrial hot spring and proposal of Ignavibacteria classis nov., for a novel lineage at the periphery of green sulfur bacteria

(2009) T. Iino et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Completed Genome Sequence of the Anaerobic Iron-Oxidizing Bacterium Acidovorax ebreus Strain TPSY

(2009) K. G. Byrne-Bailey et al.   JOURNAL OF BACTERIOLOGY

Cultivation of Uncultured Chloroflexi Subphyla: Significance and Ecophysiology of Formerly Uncultured Chloroflexi 'Subphylum I' with Natural and Biotechnological Relevance

(2009) Takeshi Yamada et al.   MICROBES AND ENVIRONMENTS

Microbial Iron Redox Cycling in a Circumneutral-pH Groundwater Seep

(2008) M. Blothe et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Photoferrotrophs thrive in an Archean Ocean analogue

(2008) S. A. Crowe et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Iron isotopes constrain biologic and abiologic processes in banded iron formation genesis

(2007) Clark M. Johnson et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Fossilization potential of iron-bearing minerals in acidic environments of Rio Tinto, Spain: Implications for Mars exploration

(2007) David C. Fernández-Remolar et al.   ICARUS