Decay of the glycolytic pathway and adaptation to intranuclear parasitism within Enterocytozoonidae microsporidia

Emergence of Enterocytozoon hepatopenaei (EHP) in farmed Penaeus (Litopenaeus) vannamei in India

(2016) K.V. Rajendran et al.   AQUACULTURE

Review of current disease threats for cultivated penaeid shrimp in Asia

(2016) Siripong Thitamadee et al.   AQUACULTURE

Laboratory cohabitation challenge model for shrimp hepatopancreatic microsporidiosis (HPM) caused by Enterocytozoon hepatopenaei (EHP)

(2016) Paul Vinu Salachan et al.   BMC Veterinary Research

Microsporidia – Emergent Pathogens in the Global Food Chain

(2016) G.D. Stentiford et al.   TRENDS IN PARASITOLOGY

Assembling large genomes with single-molecule sequencing and locality-sensitive hashing

(2015) Konstantin Berlin et al.   NATURE BIOTECHNOLOGY

Sweet Talk: Protein Glycosylation in Bacterial Interaction With the Host

(2015) Qiuhe Lu et al.   TRENDS IN MICROBIOLOGY

Contrasting host–pathogen interactions and genome evolution in two generalist and specialist microsporidian pathogens of mosquitoes

(2015) Christopher A. Desjardins et al.   Nature Communications

Genome survey and high-density genetic map construction provide genomic and genetic resources for the Pacific White Shrimp Litopenaeus vannamei

(2015) Yang Yu et al.   Scientific Reports

Genetic improvement of Pacific white shrimp [Penaeus (Litopenaeus) vannamei]: perspectives for genomic selection

(2015) Héctor Castillo-Juárez et al.   Frontiers in Genetics

A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data

(2014) David Coil et al.   BIOINFORMATICS

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Microbial Peptidyl-Prolyl cis/trans Isomerases (PPIases): Virulence Factors and Potential Alternative Drug Targets

(2014) C. M. Unal et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Rediscovery of Nucleophaga amoebae, a novel member of the Rozellomycota

(2014) Daniele Corsaro et al.   PARASITOLOGY RESEARCH

The Development of a High Density Linkage Map for Black Tiger Shrimp (Penaeus monodon) Based on cSNPs

(2014) Matthew Baranski et al.   PLoS One

Evolution of a morphological novelty occurred before genome compaction in a lineage of extreme parasites

(2014) K. L. Haag et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The microsporidian Enterocytozoon hepatopenaei is not the cause of white feces syndrome in whiteleg shrimp Penaeus (Litopenaeus) vannamei

(2013) Amornrat Tangprasittipap et al.   BMC Veterinary Research

Strategies for maximizing ATP supply in the microsporidianEncephalitozoon cuniculi: direct binding of mitochondria to the parasitophorous vacuole and clustering of the mitochondrial porin VDAC

(2013) Christian Hacker et al.   CELLULAR MICROBIOLOGY

Reduction and Expansion in Microsporidian Genome Evolution: New Insights from Comparative Genomics

(2013) Sirintra Nakjang et al.   Genome Biology and Evolution

Cadmium induces ultrastructural changes in the hepatopancreas of the freshwater crab Sinopotamon henanense

(2013) Dongmei Liu et al.   MICRON

RefSeq microbial genomes database: new representation and annotation strategy

(2013) Tatiana Tatusova et al.   NUCLEIC ACIDS RESEARCH

Nucleospora cyclopteri n. sp., an intranuclear microsporidian infecting wild lumpfish, Cyclopterus lumpus L., in Icelandic waters

(2013) Mark A Freeman et al.   Parasites & Vectors

The Role of N-Glycosylation in Folding, Trafficking, and Functionality of Lysosomal Protein CLN5

(2013) Akshay Moharir et al.   PLoS One

The Genome of Spraguea lophii and the Basis of Host-Microsporidian Interactions

(2013) Scott E. Campbell et al.   PLoS Genetics

Structure and expression of a shrimp prohormone convertase 2

(2012) Amornrat Tangprasittipap et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth

(2012) C. A. Cuomo et al.   GENOME RESEARCH

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The Genome of the Obligate Intracellular Parasite Trachipleistophora hominis: New Insights into Microsporidian Genome Dynamics and Reductive Evolution

(2012) Eva Heinz et al.   PLoS Pathogens

Immunolocalization of an Alternative Respiratory Chain in Antonospora (Paranosema) locustae Spores: Mitosomes Retain Their Role in Microsporidial Energy Metabolism

(2011) Viacheslav V. Dolgikh et al.   EUKARYOTIC CELL

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

The Reduced Genome of the Parasitic Microsporidian Enterocytozoon bieneusi Lacks Genes for Core Carbon Metabolism

(2010) Patrick J. Keeling et al.   Genome Biology and Evolution

Paranucleospora theridionn. gen., n. sp. (Microsporidia, Enterocytozoonidae) with a Life Cycle in the Salmon Louse (Lepeophtheirus salmonis, Copepoda) and Atlantic Salmon (Salmo salar)

(2010) STIAN NYLUND et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis

(2010) Nicolas Corradi et al.   Nature Communications

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

Desmozoon lepeophtherii n. gen., n. sp., (Microsporidia: Enterocytozoonidae) infecting the salmon louse Lepeophtheirus salmonis (Copepoda: Caligidae)

(2009) Mark A Freeman et al.   Parasites & Vectors

Life on Arginine for Mycoplasma hominis: Clues from Its Minimal Genome and Comparison with Other Human Urogenital Mycoplasmas

(2009) Sabine Pereyre et al.   PLoS Genetics

Genomic Survey of the Non-Cultivatable Opportunistic Human Pathogen, Enterocytozoon bieneusi

(2009) Donna E. Akiyoshi et al.   PLoS Pathogens

Genomic Analyses of the Microsporidian Nosema ceranae, an Emergent Pathogen of Honey Bees

(2009) R. Scott Cornman et al.   PLoS Pathogens

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

A novel route for ATP acquisition by the remnant mitochondria of Encephalitozoon cuniculi

(2008) Anastasios D. Tsaousis et al.   NATURE

Effect of glycosylation on protein folding: A close look at thermodynamic stabilization

(2008) D. Shental-Bechor et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystal structure of yeast hexokinase PI in complex with glucose: A classical “induced fit” example revised

(2008) Paula Kuser et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS