A Modified SDS-Based DNA Extraction Method for High Quality Environmental DNA from Seafloor Environments
出版年份 2016 全文链接
标题
A Modified SDS-Based DNA Extraction Method for High Quality Environmental DNA from Seafloor Environments
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 07, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2016-06-24
DOI
10.3389/fmicb.2016.00986
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Diversity and Metabolic Potentials of Subsurface Crustal Microorganisms from the Western Flank of the Mid-Atlantic Ridge
- (2016) Xinxu Zhang et al. Frontiers in Microbiology
- A comparison of DNA extraction methods for biodiversity studies of eukaryotes in marine sediments
- (2015) K Lekang et al. AQUATIC MICROBIAL ECOLOGY
- Ecology and exploration of the rare biosphere
- (2015) Michael D. J. Lynch et al. NATURE REVIEWS MICROBIOLOGY
- A modular method for the extraction of DNA and RNA, and the separation of DNA pools from diverse environmental sample types
- (2015) Mark A. Lever et al. Frontiers in Microbiology
- Hot-Alkaline DNA Extraction Method for Deep-Subseafloor Archaeal Communities
- (2014) Yuki Morono et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Influence of DNA Extraction Method, 16S rRNA Targeted Hypervariable Regions, and Sample Origin on Microbial Diversity Detected by 454 Pyrosequencing in Marine Chemosynthetic Ecosystems
- (2014) Perrine Cruaud et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Composition of hydrothermal fluids and mineralogy of associated chimney material on the East Scotia Ridge back-arc spreading centre
- (2014) Rachael H. James et al. GEOCHIMICA ET COSMOCHIMICA ACTA
- A procedure for separate recovery of extra- and intracellular DNA from a single marine sediment sample
- (2014) Mashal Alawi et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Phylogenetic and Functional Diversity of Microbial Communities Associated with Subsurface Sediments of the Sonora Margin, Guaymas Basin
- (2014) Adrien Vigneron et al. PLoS One
- Biomineralization mediated by anaerobic methane-consuming cell consortia
- (2014) Ying Chen et al. Scientific Reports
- Soil Microbial Community Responses to a Decade of Warming as Revealed by Comparative Metagenomics
- (2013) Chengwei Luo et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities
- (2013) Ramiro Logares et al. ENVIRONMENTAL MICROBIOLOGY
- Commercial DNA extraction kits impact observed microbial community composition in permafrost samples
- (2013) Tatiana A. Vishnivetskaya et al. FEMS MICROBIOLOGY ECOLOGY
- Taxonomically and functionally diverse microbial communities in deep crystalline rocks of the Fennoscandian shield
- (2013) Mari Nyyssönen et al. ISME Journal
- Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses
- (2013) Jun Meng et al. ISME Journal
- Predominant archaea in marine sediments degrade detrital proteins
- (2013) Karen G. Lloyd et al. NATURE
- Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
- (2013) Mads Albertsen et al. NATURE BIOTECHNOLOGY
- SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
- (2012) Evguenia Kopylova et al. BIOINFORMATICS
- Bacterial and archaeal diversities in Yunnan and Tibetan hot springs, China
- (2012) Zhao-Qi Song et al. ENVIRONMENTAL MICROBIOLOGY
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- High-Throughput Sequencing of 16S rRNA Gene Amplicons: Effects of Extraction Procedure, Primer Length and Annealing Temperature
- (2012) Martin J. Sergeant et al. PLoS One
- PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets
- (2012) Ameet J. Pinto et al. PLoS One
- Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge
- (2012) S. L. Jorgensen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- A new DNA extraction method by controlled alkaline treatments from consolidated subsurface sediments
- (2011) Mariko Kouduka et al. FEMS MICROBIOLOGY LETTERS
- DNA extractions from deep subseafloor sediments: Novel cryogenic-mill-based procedure and comparison to existing protocols
- (2011) Karine Alain et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Clay mineral distribution in surface sediments of the South China Sea and its significance for in sediment sources and transport
- (2010) Jianguo Liu et al. CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY
- Community Structure of Archaea from Deep-Sea Sediments of the South China Sea
- (2010) Peng Wang et al. MICROBIAL ECOLOGY
- Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
- (2010) Katharina F. Ettwig et al. NATURE
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Anaerobic Oxidation of Methane: Progress with an Unknown Process
- (2009) Katrin Knittel et al. Annual Review of Microbiology
- Quantitative PCR methods for RNA and DNA in marine sediments: maximizing yield while overcoming inhibition
- (2009) Karen G. Lloyd et al. FEMS MICROBIOLOGY ECOLOGY
- Discriminative detection and enumeration of microbial life in marine subsurface sediments
- (2009) Yuki Morono et al. ISME Journal
- Microbial dissolution of clay minerals as a source of iron and silica in marine sediments
- (2009) John S. Vorhies et al. Nature Geoscience
- GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent
- (2009) F. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interaction between DNA and Cationic Surfactants: Effect of DNA Conformation and Surfactant Headgroup†
- (2008) Rita S. Dias et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Significant contribution of Archaea to extant biomass in marine subsurface sediments
- (2008) Julius S. Lipp et al. NATURE
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