Resource Partitioning between Bacteria, Fungi, and Protists in the Detritusphere of an Agricultural Soil

Stable isotope probing of carbon flow in the plant holobiont

(2016) Feth el Zahar Haichar et al.   CURRENT OPINION IN BIOTECHNOLOGY

Spatial Distribution of Fungal Communities in an Arable Soil

(2016) Julia Moll et al.   PLoS One

Description of Lecythium terrestris sp. nov. (Chlamydophryidae, Cercozoa), a Soil Dwelling Protist Feeding on Fungi and Algae

(2016) Kenneth Dumack et al.   PROTIST

Carbon transfer from maize roots and litter into bacteria and fungi depends on soil depth and time

(2016) Karolin Müller et al.   SOIL BIOLOGY & BIOCHEMISTRY

Unearthing the Ecology of Soil Microorganisms Using a High Resolution DNA-SIP Approach to Explore Cellulose and Xylose Metabolism in Soil

(2016) Charles Pepe-Ranney et al.   Frontiers in Microbiology

Stable-Isotope Probing Identifies Uncultured Planctomycetes as Primary Degraders of a Complex Heteropolysaccharide in Soil

(2015) Xiaoqing Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Quantitative Microbial Ecology through Stable Isotope Probing

(2015) Bruce A. Hungate et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Revisiting the hypothesis that fungal-to-bacterial dominance characterizes turnover of soil organic matter and nutrients

(2015) Johannes Rousk et al.   ECOLOGICAL MONOGRAPHS

Small but active - pool size does not matter for carbon incorporation in below-ground food webs

(2015) Johanna Pausch et al.   FUNCTIONAL ECOLOGY

Metatranscriptomic census of active protists in soils

(2015) Stefan Geisen et al.   ISME Journal

Resource Type and Availability Regulate Fungal Communities Along Arable Soil Profiles

(2015) Julia Moll et al.   MICROBIAL ECOLOGY

Multiple micro-predators controlling bacterial communities in the environment

(2014) Julia Johnke et al.   CURRENT OPINION IN BIOTECHNOLOGY

Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps

(2014) Sara Kleindienst et al.   ISME Journal

Exploring the transfer of recent plant photosynthates to soil microbes: mycorrhizal pathway vs direct root exudation

(2014) Christina Kaiser et al.   NEW PHYTOLOGIST

Multisubstrate Isotope Labeling and Metagenomic Analysis of Active Soil Bacterial Communities

(2014) Y. Verastegui et al.   mBio

Assimilation of Cellulose-Derived Carbon by Microeukaryotes in Oxic and Anoxic Slurries of an Aerated Soil

(2013) Antonis Chatzinotas et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Probing potential microbial coupling of carbon and nitrogen cycling during decomposition of maize residue by 13C-DNA-SIP

(2013) Fenliang Fan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Selective transport of plant root-associated bacterial populations in agricultural soils upon snowmelt

(2013) Dörte Dibbern et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial modulators of soil carbon storage: integrating genomic and metabolic knowledge for global prediction

(2013) Pankaj Trivedi et al.   TRENDS IN MICROBIOLOGY

Identification of Cellulose-Responsive Bacterial and Fungal Communities in Geographically and Edaphically Different Soils by Using Stable Isotope Probing

(2012) Stephanie A. Eichorst et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers

(2012) Martina Štursová et al.   FEMS MICROBIOLOGY ECOLOGY

Using Stable Isotopes to Differentiate Trophic Feeding Channels within Soil Food Webs

(2012) Felicity V. Crotty et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Shedding Light on Vampires: The Phylogeny of Vampyrellid Amoebae Revisited

(2012) Sebastian Hess et al.   PLoS One

Testing the Limits of 454 Pyrotag Sequencing: Reproducibility, Quantitative Assessment and Comparison to T-RFLP Fingerprinting of Aquifer Microbes

(2012) Giovanni Pilloni et al.   PLoS One

Effects of resource availability and quality on the structure of the micro-food web of an arable soil across depth

(2012) Anika Scharroba et al.   SOIL BIOLOGY & BIOCHEMISTRY

Linking microbial community structure and allocation of plant-derived carbon in an organic agricultural soil using 13CO2 pulse-chase labelling combined with 13C-PLFA profiling

(2012) Niina M. Tavi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Identification of biomass utilizing bacteria in a carbon-depleted glacier forefield soil by the use of13C DNA stable isotope probing

(2012) Anita Zumsteg et al.   Environmental Microbiology Reports

Ecological and evolutive implications of bacterial defences against predators

(2011) Alexandre Jousset   ENVIRONMENTAL MICROBIOLOGY

Incorporation of plant residue-derived carbon into the microeukaryotic community in a rice field soil revealed by DNA stable-isotope probing

(2011) Jun Murase et al.   FEMS MICROBIOLOGY ECOLOGY

Persistence of soil organic matter as an ecosystem property

(2011) Michael W. I. Schmidt et al.   NATURE

Carbon flow into microbial and fungal biomass as a basis for the belowground food web of agroecosystems

(2011) Susanne Kramer et al.   PEDOBIOLOGIA

Identification of microbial communities that assimilate substrate from root cap cells in an aerobic soil using a DNA-SIP approach

(2011) Yong Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance

(2011) Katherine C. Goldfarb et al.   Frontiers in Microbiology

Assessing the effect of organic residue quality on active decomposing fungi in a tropical Vertisol using 15N-DNA stable isotope probing

(2010) Mingrelia España et al.   Fungal Ecology

Considering fungal:bacterial dominance in soils – Methods, controls, and ecosystem implications

(2010) Michael S. Strickland et al.   SOIL BIOLOGY & BIOCHEMISTRY

The fat that matters: Soil food web analysis using fatty acids and their carbon stable isotope signature

(2010) Liliane Ruess et al.   SOIL BIOLOGY & BIOCHEMISTRY

Contamination of Soil by Copper Affects the Dynamics, Diversity, and Activity of Soil Bacterial Communities Involved in Wheat Decomposition and Carbon Storage

(2009) L. Bernard et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolic responses of novel cellulolytic and saccharolytic agricultural soil Bacteria to oxygen

(2009) Stefanie Schellenberger et al.   ENVIRONMENTAL MICROBIOLOGY

Small-scale Diversity and Succession of Fungi in the Detritusphere of Rye Residues

(2009) Christian Poll et al.   MICROBIAL ECOLOGY

Microbial communities and their relevance for ecosystem models: Decomposition as a case study

(2009) Krista L. McGuire et al.   SOIL BIOLOGY & BIOCHEMISTRY

Fingerprinting methods to approach multitrophic interactions among microflora and microfauna communities in soil

(2008) V. Edel-Hermann et al.   BIOLOGY AND FERTILITY OF SOILS

13C-isotope analyses reveal that chemolithoautotrophicGamma- andEpsilonproteobacteriafeed a microbial food web in a pelagic redoxcline of the central Baltic Sea

(2008) Sabine Glaubitz et al.   ENVIRONMENTAL MICROBIOLOGY

Strategies of soilborne plant pathogenic fungi in relation to disease suppression

(2008) A.J. Termorshuizen et al.   Fungal Ecology

An optimised PCR/T-RFLP fingerprinting approach for the investigation of protistan communities in groundwater environments

(2008) Kathrin Euringer et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Labile and recalcitrant plant fractions are utilised by distinct microbial communities in soil: Independent of the presence of roots and mycorrhizal fungi

(2008) Eric Paterson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Impact of wheat straw decomposition on successional patterns of soil microbial community structure

(2008) Fabiola Bastian et al.   SOIL BIOLOGY & BIOCHEMISTRY