Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France)

Evidence for an active rare biosphere within freshwater protists community

(2015) Didier Debroas et al.   MOLECULAR ECOLOGY

Temporal dynamics of activeArchaeain oxygen-depleted zones of two deep lakes

(2015) Mylène Hugoni et al.   Environmental Microbiology Reports

High protists diversity in the plankton of sulfurous lakes and lagoons examined by 18s rRNA gene sequence analyses

(2015) Xavier Triadó-Margarit et al.   Environmental Microbiology Reports

Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

(2014) Peter Stief et al.   BMC MICROBIOLOGY

Patterns of Rare and Abundant Marine Microbial Eukaryotes

(2014) Ramiro Logares et al.   CURRENT BIOLOGY

Protistan diversity in a permanently stratified meromictic lake (Lake Alatsee, SW Germany)

(2014) Andreas Oikonomou et al.   ENVIRONMENTAL MICROBIOLOGY

Importance of Saprotrophic Freshwater Fungi for Pollen Degradation

(2014) Christian Wurzbacher et al.   PLoS One

Protistan grazing in a meromictic freshwater lake with anoxic bottom water

(2013) Andreas Oikonomou et al.   FEMS MICROBIOLOGY ECOLOGY

Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters

(2013) Fernando Unrein et al.   ISME Journal

Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses

(2013) Steven J Blazewicz et al.   ISME Journal

Phylogenetic Affiliation of SSU rRNA Genes Generated by Massively Parallel Sequencing: New Insights into the Freshwater Protist Diversity

(2013) Najwa Taib et al.   PLoS One

Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters

(2013) M. Hugoni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems

(2013) Mylène Hugoni et al.   RESEARCH IN MICROBIOLOGY

In situinteractions between photosynthetic picoeukaryotes and bacterioplankton in the Atlantic Ocean: evidence for mixotrophy

(2013) Manuela Hartmann et al.   Environmental Microbiology Reports

Anaerobic energy metabolism in unicellular photosynthetic eukaryotes

(2012) Ariane Atteia et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes

(2012) Jean-François Mangot et al.   ENVIRONMENTAL MICROBIOLOGY

Effect of oxygen minimum zone formation on communities of marine protists

(2012) William Orsi et al.   ISME Journal

Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes

(2012) M. Muller et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Mixotrophic basis of Atlantic oligotrophic ecosystems

(2012) M. Hartmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequencing our way towards understanding global eukaryotic biodiversity

(2012) Holly M. Bik et al.   TRENDS IN ECOLOGY & EVOLUTION

New haptophyte lineages and multiple independent colonizations of freshwater ecosystems

(2012) Marianne Simon et al.   Environmental Microbiology Reports

Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change

(2012) Sophie Charvet et al.   Frontiers in Microbiology

Phylogenetic composition and distribution of picoeukaryotes in the hypoxic northwestern coast of the Gulf of Mexico

(2012) Emma Rocke et al.   MicrobiologyOpen

Protist diversity in suboxic and sulfidic waters of the Black Sea

(2011) Claudia Wylezich et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial seed banks: the ecological and evolutionary implications of dormancy

(2011) Jay T. Lennon et al.   NATURE REVIEWS MICROBIOLOGY

Activity of abundant and rare bacteria in a coastal ocean

(2011) B. J. Campbell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Spatio-temporal variations in protistan communities along an O2/H2S gradient in the anoxic Framvaren Fjord (Norway)

(2010) Anke Behnke et al.   FEMS MICROBIOLOGY ECOLOGY

Eukaryote-Dominated Biofilms and Their Significance in Acidic Environments

(2010) Sandra S. Brake et al.   GEOMICROBIOLOGY JOURNAL

Vertical structure of small eukaryotes in three lakes that differ by their trophic status: a quantitative approach

(2010) Cecile Lepère et al.   ISME Journal

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

(2010) THORSTEN STOECK et al.   MOLECULAR ECOLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Community Structure and Dynamics of Small Eukaryotes Targeted by New Oligonucleotide Probes: New Insight into the Lacustrine Microbial Food Web

(2009) J.-F. Mangot et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Protistan diversity in suboxic and anoxic waters of the Gotland Deep (Baltic Sea) as revealed by 18S rRNA clone libraries

(2009) A Stock et al.   AQUATIC MICROBIAL ECOLOGY

Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities

(2009) Thorsten Stoeck et al.   BMC BIOLOGY

Vertical structure of archaeal communities and the distribution of ammonia monooxygenase A gene variants in two meromictic High Arctic lakes

(2009) Jérémie Pouliot et al.   ENVIRONMENTAL MICROBIOLOGY

Predation impact of ciliated and flagellated protozoa during a summer bloom of brown sulfur bacteria in a meromictic coastal lake

(2009) Alessandro Saccà et al.   FEMS MICROBIOLOGY ECOLOGY

Grazing rates and functional diversity of uncultured heterotrophic flagellates

(2009) Ramon Massana et al.   ISME Journal

In Situ Detection of Freshwater Fungi in an Alpine Stream by New Taxon-Specific Fluorescence In Situ Hybridization Probes

(2008) C. Baschien et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unexpected Importance of Potential Parasites in the Composition of the Freshwater Small-Eukaryote Community

(2008) C. Lepere et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Oxygen and the Spatial Structure of Microbial Communities

(2008) Tom Fenchel et al.   BIOLOGICAL REVIEWS

Widespread occurrence and genetic diversity of marine parasitoids belonging toSyndiniales(Alveolata)

(2008) L. Guillou et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial eukaryotes in the hypersaline anoxic L'Atalante deep-sea basin

(2008) Eva Alexander et al.   ENVIRONMENTAL MICROBIOLOGY