Fungal and Prokaryotic Activities in the Marine Subsurface Biosphere at Peru Margin and Canterbury Basin Inferred from RNA-Based Analyses and Microscopy
出版年份 2016 全文链接
标题
Fungal and Prokaryotic Activities in the Marine Subsurface Biosphere at Peru Margin and Canterbury Basin Inferred from RNA-Based Analyses and Microscopy
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 7, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2016-06-09
DOI
10.3389/fmicb.2016.00846
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Slow Microbial Life in the Seabed
- (2016) Bo Barker Jørgensen et al. Annual Review of Marine Science
- Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea
- (2016) Brett J. Baker et al. Nature Microbiology
- Species Richness and Adaptation of Marine Fungi from Deep-Subseafloor Sediments
- (2015) Vanessa Rédou et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- MetaPathways v2.5: quantitative functional, taxonomic and usability improvements: Fig. 1.
- (2015) Kishori M. Konwar et al. BIOINFORMATICS
- Molecular diversity and distribution of marine fungi across 130 European environmental samples
- (2015) Thomas A. Richards et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Effects of hydrostatic pressure on yeasts isolated from deep-sea hydrothermal vents
- (2015) Gaëtan Burgaud et al. RESEARCH IN MICROBIOLOGY
- Diversity and distribution of fungal communities in the marine sediments of Kongsfjorden, Svalbard (High Arctic)
- (2015) Tao Zhang et al. Scientific Reports
- Revealing the unexplored fungal communities in deep groundwater of crystalline bedrock fracture zones in Olkiluoto, Finland
- (2015) Elina Sohlberg et al. Frontiers in Microbiology
- Biogenic Mn-Oxides in Subseafloor Basalts
- (2015) Magnus Ivarsson et al. PLoS One
- Comparison of library preparation methods reveals their impact on interpretation of metatranscriptomic data
- (2014) Adriana Alberti et al. BMC GENOMICS
- In-depth analyses of deep subsurface sediments using 454-pyrosequencing reveals a reservoir of buried fungal communities at record-breaking depths
- (2014) Vanessa Rédou et al. FEMS MICROBIOLOGY ECOLOGY
- Deep-biosphere consortium of fungi and prokaryotes in Eocene subseafloor basalts
- (2014) S. Bengtson et al. Geobiology
- Microorganisms persist at record depths in the subseafloor of the Canterbury Basin
- (2014) Maria-Cristina Ciobanu et al. ISME Journal
- A review of prokaryotic populations and processes in sub-seafloor sediments, including biosphere:geosphere interactions
- (2014) R. John Parkes et al. MARINE GEOLOGY
- High Fungal Diversity and Abundance Recovered in the Deep-Sea Sediments of the Pacific Ocean
- (2014) Wei Xu et al. MICROBIAL ECOLOGY
- Fresh from the biotech pipeline—2013
- (2014) Jim Kling NATURE BIOTECHNOLOGY
- Evaluation of metatranscriptomic protocols and application to the study of freshwater microbial communities
- (2014) Despina Tsementzi et al. Environmental Microbiology Reports
- From Dandruff to Deep-Sea Vents: Malassezia-like Fungi Are Ecologically Hyper-diverse
- (2014) Anthony Amend PLoS Pathogens
- MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information
- (2013) Kishori M Konwar et al. BMC BIOINFORMATICS
- Fungal colonies in open fractures of subseafloor basalt
- (2013) Magnus Ivarsson et al. GEO-MARINE LETTERS
- Comparative metatranscriptomic signatures of wood and paper feeding in the gut of the termiteReticulitermes flavipes(Isoptera: Rhinotermitidae)
- (2013) R. Raychoudhury et al. INSECT MOLECULAR BIOLOGY
- Bioavailability of Heavy Metals in Soil: Impact on Microbial Biodegradation of Organic Compounds and Possible Improvement Strategies
- (2013) Ademola Olaniran et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Inorganic and biogenic As-sulfide precipitation at seafloor hydrothermal fields
- (2013) Vesselin M. Dekov et al. MARINE GEOLOGY
- Gene expression in the deep biosphere
- (2013) William D. Orsi et al. NATURE
- Predominant archaea in marine sediments degrade detrital proteins
- (2013) Karen G. Lloyd et al. NATURE
- Microbial life under extreme energy limitation
- (2013) Tori M. Hoehler et al. NATURE REVIEWS MICROBIOLOGY
- Deep Sequencing of Subseafloor Eukaryotic rRNA Reveals Active Fungi across Marine Subsurface Provinces
- (2013) William Orsi et al. PLoS One
- Microbial activity in the marine deep biosphere: progress and prospects
- (2013) Beth N. Orcutt et al. Frontiers in Microbiology
- Diversity and Characterization of Culturable Fungi from Marine Sediment Collected from St. Helena Bay, South Africa
- (2012) Marnel Mouton et al. MICROBIAL ECOLOGY
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Metatranscriptomics Reveals the Diversity of Genes Expressed by Eukaryotes in Forest Soils
- (2012) Coralie Damon et al. PLoS One
- Global distribution of microbial abundance and biomass in subseafloor sediment
- (2012) J. Kallmeyer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments
- (2011) Takahiko Nagahama et al. ENVIRONMENTAL MICROBIOLOGY
- Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge
- (2011) Gilberto E. Flores et al. ENVIRONMENTAL MICROBIOLOGY
- Microbial eukaryote life in the new hypersaline deep-sea basin Thetis
- (2011) Alexandra Stock et al. EXTREMOPHILES
- Ascomycete phylotypes recovered from a Gulf of Mexico methane seep are identical to an uncultured deep-sea fungal clade from the Pacific
- (2011) Andrew David Thaler et al. Fungal Ecology
- Adaptive seeds tame genomic sequence comparison
- (2011) S. M. Kielbasa et al. GENOME RESEARCH
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Deep subseafloor microbial cells on physiological standby
- (2011) B. B. Jorgensen PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- Marine subsurface eukaryotes: the fungal majority
- (2010) Virginia P. Edgcomb et al. ENVIRONMENTAL MICROBIOLOGY
- Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna
- (2010) Gaëtan Burgaud et al. FEMS MICROBIOLOGY ECOLOGY
- Fungal diversity in deep-sea sediments – the presence of novel fungal groups
- (2010) Yuriko Nagano et al. Fungal Ecology
- Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics
- (2010) Frank J Stewart et al. ISME Journal
- Fungal Community Analysis in the Deep-Sea Sediments of the Central Indian Basin by Culture-Independent Approach
- (2010) Purnima Singh et al. MICROBIAL ECOLOGY
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Microbial Provinces in the Subseafloor
- (2009) Matthew O. Schrenk et al. Annual Review of Marine Science
- Fungal Diversity in Deep-Sea Hydrothermal Ecosystems
- (2009) T. Le Calvez et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
- (2009) P. D. Karp et al. BRIEFINGS IN BIOINFORMATICS
- Diversity of culturable marine filamentous fungi from deep-sea hydrothermal vents
- (2009) Gaëtan Burgaud et al. ENVIRONMENTAL MICROBIOLOGY
- Fungal diversity in oxygen-depleted regions of the Arabian Sea revealed by targeted environmental sequencing combined with cultivation
- (2009) Cathrine S. Jebaraj et al. FEMS MICROBIOLOGY ECOLOGY
- Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
- (2008) J. F. Biddle et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbial community gene expression in ocean surface waters
- (2008) J. Frias-Lopez et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started