Differences in the Composition of Archaeal Communities in Sediments from Contrasting Zones of Lake Taihu

Applying remote sensing techniques to monitoring seasonal and interannual changes of aquatic vegetation in Taihu Lake, China

(2016) Juhua Luo et al.   ECOLOGICAL INDICATORS

Archaea

(2015) Laura Eme et al.   CURRENT BIOLOGY

Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling

(2015) Cindy J. Castelle et al.   CURRENT BIOLOGY

Insights in the ecology and evolutionary history of the Miscellaneous Crenarchaeotic Group lineage

(2015) Mireia Fillol et al.   ISME Journal

Dynamics of phosphorus–iron–sulfur at the sediment–water interface influenced by algae blooms decomposition

(2015) Chao Han et al.   JOURNAL OF HAZARDOUS MATERIALS

Sediment prokaryote communities in different sites of eutrophic Lake Taihu and their interactions with environmental factors

(2015) Nan Chen et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

UnculturedDesulfobacteraceaeand Crenarchaeotal group C3 incorporate13C-acetate in coastal marine sediment

(2015) Hyunsoo Na et al.   Environmental Microbiology Reports

Temporal dynamics of activeArchaeain oxygen-depleted zones of two deep lakes

(2015) Mylène Hugoni et al.   Environmental Microbiology Reports

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Microbial pelagic metabolism and CDOM characterization in a phytoplankton-dominated versus a macrophyte-dominated shallow lake

(2014) A. Torremorell et al.   HYDROBIOLOGIA

Community Composition of Known and Uncultured Archaeal Lineages in Anaerobic or Anoxic Wastewater Treatment Sludge

(2014) Kyohei Kuroda et al.   MICROBIAL ECOLOGY

Temperature and Cyanobacterial Bloom Biomass Influence Phosphorous Cycling in Eutrophic Lake Sediments

(2014) Mo Chen et al.   PLoS One

A New Method for Modifying Thresholds in the Classification of Tree Models for Mapping Aquatic Vegetation in Taihu Lake with Satellite Images

(2014) Juhua Luo et al.   Remote Sensing

Analysis on the formation condition of the algae-induced odorous black water agglomerate

(2014) Guofang Wang et al.   SAUDI JOURNAL OF BIOLOGICAL SCIENCES

Archaea in Biogeochemical Cycles

(2013) Pierre Offre et al.   Annual Review of Microbiology

Novel Cultivation-Based Approach To Understanding the Miscellaneous Crenarchaeotic Group (MCG) Archaea from Sedimentary Ecosystems

(2013) Emma J. Gagen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Meta-Analysis of Quantification Methods Shows that Archaea and Bacteria Have Similar Abundances in the Subseafloor

(2013) Karen G. Lloyd et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses

(2013) Jun Meng et al.   ISME Journal

Insights into the phylogeny and coding potential of microbial dark matter

(2013) Christian Rinke et al.   NATURE

Predominant archaea in marine sediments degrade detrital proteins

(2013) Karen G. Lloyd et al.   NATURE

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Influence of algal bloom degradation on nutrient release at the sediment–water interface in Lake Taihu, China

(2012) Mengyuan Zhu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Intra-habitat Differences in the Composition of the Methanogenic Archaeal Community between theMicrocystis-Dominated and the Macrophyte-Dominated Bays in Taihu Lake

(2012) Xianfang Fan et al.   GEOMICROBIOLOGY JOURNAL

Biostimulation induces syntrophic interactions that impact C, S and N cycling in a sediment microbial community

(2012) Kim M Handley et al.   ISME Journal

Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments

(2012) Kyoko Kubo et al.   ISME Journal

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Compositional differences of chromophoric dissolved organic matter derived from phytoplankton and macrophytes

(2012) Yunlin Zhang et al.   ORGANIC GEOCHEMISTRY

An Intertwined Evolutionary History of Methanogenic Archaea and Sulfate Reduction

(2012) Dwi Susanti et al.   PLoS One

Methanogens: a window into ancient sulfur metabolism

(2012) Yuchen Liu et al.   TRENDS IN MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Characterization of the bacterial community composition in a hypoxic zone induced by Microcystis blooms in Lake Taihu, China

(2011) Huabing Li et al.   FEMS MICROBIOLOGY ECOLOGY

Remote sensing of aquatic vegetation distribution in Taihu Lake using an improved classification tree with modified thresholds

(2011) Dehua Zhao et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

The effects of temperature and nutrient ratios on Microcystis blooms in Lake Taihu, China: An 11-year investigation

(2010) Xia Liu et al.   HARMFUL ALGAE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Archaea — timeline of the third domain

(2010) Ricardo Cavicchioli   NATURE REVIEWS MICROBIOLOGY

Heterogeneity of archaeal and bacterial ammonia-oxidizing communities in Lake Taihu, China

(2010) Yucheng Wu et al.   Environmental Microbiology Reports

Bacteriarather thanArchaeadominate microbial ammonia oxidation in an agricultural soil

(2009) Zhongjun Jia et al.   ENVIRONMENTAL MICROBIOLOGY