Comparative Functional Genomic Analysis of Two Vibrio Phages Reveals Complex Metabolic Interactions with the Host Cell

High coverage metabolomics analysis reveals phage-specific alterations to Pseudomonas aeruginosa physiology during infection

(2016) Jeroen De Smet et al.   ISME Journal

Isolation and Characterization of Two Lytic Bacteriophages, φSt2 and φGrn1; Phage Therapy Application for Biological Control of Vibrio alginolyticus in Aquaculture Live Feeds

(2016) Panos G. Kalatzis et al.   PLoS One

Next-Generation “-omics” Approaches Reveal a Massive Alteration of Host RNA Metabolism during Bacteriophage Infection of Pseudomonas aeruginosa

(2016) Anne Chevallereau et al.   PLoS Genetics

Structural and Enzymatic Characterization of ABgp46, a Novel Phage Endolysin with Broad Anti-Gram-Negative Bacterial Activity

(2016) Hugo Oliveira et al.   Frontiers in Microbiology

Exogenous Lytic Activity of SPN9CC Endolysin Against Gram-Negative Bacteria

(2016) Jeong-A Lim et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Kinetic and Structural Basis for Acyl-Group Selectivity and NAD+ Dependence in Sirtuin-Catalyzed Deacylation

(2015) Jessica L. Feldman et al.   BIOCHEMISTRY

Complete genome sequence of a giant Vibrio bacteriophage VH7D

(2015) Zhu-Hua Luo et al.   Marine Genomics

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Protein lysine acetylation in bacteria: Current state of the art

(2015) Tassadit Ouidir et al.   PROTEOMICS

dUTPase: the frequently overlooked enzyme encoded by many retroviruses

(2015) Amnon Hizi et al.   Retrovirology

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Genome organisation of the Acinetobacter lytic phage ZZ1 and comparison with other T4-like Acinetobacter phages

(2014) Jing Jin et al.   BMC GENOMICS

A Thermostable Salmonella Phage Endolysin, Lys68, with Broad Bactericidal Properties against Gram-Negative Pathogens in Presence of Weak Acids

(2014) Hugo Oliveira et al.   PLoS One

Alternate deacylating specificities of the archaeal sirtuins Sir2Af1 and Sir2Af2

(2014) Alison E. Ringel et al.   PROTEIN SCIENCE

Supersize me: Cronobacter sakazakii phage GAP32

(2014) Reza Abbasifar et al.   VIROLOGY

First genome sequences of Achromobacter phages reveal new members of the N4 family

(2014) Johannes Wittmann et al.   Virology Journal

Natural solution to antibiotic resistance: bacteriophages ‘The Living Drugs’

(2014) Sabah A. A. Jassim et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Bacteriophages as Vehicles for Antibiotic Resistance Genes in the Environment

(2014) Jose Luis Balcazar   PLoS Pathogens

Ribonucleotide reductases: essential enzymes for bacterial life

(2014) Eduard Torrents   Frontiers in Cellular and Infection Microbiology

Homing endonucleases from mobile group I introns: discovery to genome engineering

(2014) Barry L Stoddard   Mobile DNA

A suggested classification for two groups of Campylobacter myoviruses

(2013) Muhammad Afzal Javed et al.   ARCHIVES OF VIROLOGY

Recycling Nicotinamide. The Transition-State Structure of Human Nicotinamide Phosphoribosyltransferase

(2013) Emmanuel S. Burgos et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

ZincExplorer: an accurate hybrid method to improve the prediction of zinc-binding sites from protein sequences

(2013) Zhen Chen et al.   Molecular BioSystems

Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome

(2013) Sheetal R. Modi et al.   NATURE

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

Genome-wide characterization of vibrio phage ϕpp2 with unique arrangements of the mob-like genes

(2012) Ying-Rong Lin et al.   BMC GENOMICS

Complete Genome Sequence of Phytopathogenic Pectobacterium carotovorum subsp. carotovorum Bacteriophage PP1

(2012) Ju-Hoon Lee et al.   JOURNAL OF VIROLOGY

Characterization of a T5-Like Coliphage, SPC35, and Differential Development of Resistance to SPC35 inSalmonella entericaSerovar Typhimurium andEscherichia coli

(2011) Minsik Kim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Antibacterial activity of Acinetobacter baumannii phage ϕAB2 endolysin (LysAB2) against both Gram-positive and Gram-negative bacteria

(2011) Meng-Jiun Lai et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Photodynamic therapy based on 5-aminolevulinic acid and its use as an antimicrobial Agent

(2011) Frederick Harris et al.   MEDICINAL RESEARCH REVIEWS

Mobile DNA elements in T4 and related phages

(2010) David R Edgell et al.   Virology Journal

Genomes of the T4-related bacteriophages as windows on microbial genome evolution

(2010) Vasiliy M Petrov et al.   Virology Journal

Synthesizing and Salvaging NAD+: Lessons Learned from Chlamydomonas reinhardtii

(2010) Huawen Lin et al.   PLoS Genetics

Classification of Myoviridae bacteriophages using protein sequence similarity

(2009) Rob Lavigne et al.   BMC MICROBIOLOGY

A Free-Standing Homing Endonuclease Targets an Intron Insertion Site in the psbA Gene of Cyanophages

(2009) Qinglu Zeng et al.   CURRENT BIOLOGY

Microbial NAD Metabolism: Lessons from Comparative Genomics

(2009) F. Gazzaniga et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The structural role of the zinc ion can be dispensable in prokaryotic zinc-finger domains

(2009) I. Baglivo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In Silico and In Vivo Evaluation of Bacteriophage  EF24C, a Candidate for Treatment of Enterococcus faecalis Infections

(2008) J. Uchiyama et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH