标题
DNA methylation: conducting the orchestra from exposure to phenotype?
作者
关键词
DNA methylation, EWAS, Association studies, Biomarker, Transcriptional microvariability, Gene-environment interactions
出版物
Clinical Epigenetics
Volume 8, Issue 1, Pages -
出版商
Springer Nature
发表日期
2016-09-06
DOI
10.1186/s13148-016-0256-8
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Integration of multiple “OMIC” biomarkers: A precision medicine strategy for lung cancer
- (2017) Ana I. Robles et al. LUNG CANCER
- The emerging epitranscriptomics of long noncoding RNAs
- (2016) Andrew Shafik et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Association between DNA hypomethylation at IL13 gene and allergic rhinitis in house dust mite-sensitized subjects
- (2016) J.Y. Li et al. CLINICAL AND EXPERIMENTAL ALLERGY
- Role of DNA methylation in cardiovascular diseases
- (2016) Ye Zhang et al. CLINICAL AND EXPERIMENTAL HYPERTENSION
- LncRNAs, lost in translation or licence to regulate?
- (2016) Alvaro de Andres-Pablo et al. CURRENT GENETICS
- Genome-wide alterations in hippocampal 5-hydroxymethylcytosine links plasticity genes to acute stress
- (2016) Sisi Li et al. NEUROBIOLOGY OF DISEASE
- Analysis of a four generation family reveals the widespread sequence-dependent maintenance of allelic DNA methylation in somatic and germ cells
- (2016) Aifa Tang et al. Scientific Reports
- Epigenome-wide Association Studies and the Interpretation of Disease -Omics
- (2016) Ewan Birney et al. PLoS Genetics
- The cardiovascular and hypothalamus-pituitary-adrenal axis response to stress is controlled by glucocorticoid receptor sequence variants and promoter methylation
- (2016) Ting Li-Tempel et al. Clinical Epigenetics
- DNA Methylation in Skeletal Muscle Stem Cell Specification, Proliferation, and Differentiation
- (2016) Rhianna C. Laker et al. Stem Cells International
- Lower Methylation of Glucocorticoid Receptor Gene Promoter 1F in Peripheral Blood of Veterans with Posttraumatic Stress Disorder
- (2015) Rachel Yehuda et al. BIOLOGICAL PSYCHIATRY
- Changes in correlation between promoter methylation and gene expression in cancer
- (2015) Matahi Moarii et al. BMC GENOMICS
- The alternative translated MDMXp60isoform regulates MDM2 activity
- (2015) Anne-Sophie Tournillon et al. CELL CYCLE
- Power and sample size estimation for epigenome-wide association scans to detect differential DNA methylation
- (2015) Pei-Chien Tsai et al. INTERNATIONAL JOURNAL OF EPIDEMIOLOGY
- BDNF promoter I methylation correlates between post-mortem human peripheral and brain tissues
- (2015) Ludwig Stenz et al. NEUROSCIENCE RESEARCH
- Where does transcription start? 5′-RACE adapted to next-generation sequencing
- (2015) Fleur A.D. Leenen et al. NUCLEIC ACIDS RESEARCH
- Increased methylation of the GR 1F promoter in post-institutionalized adults
- (2015) M.M.C. Elwenspoek et al. PSYCHONEUROENDOCRINOLOGY
- The relativity of biological function
- (2015) Manfred D. Laubichler et al. THEORY IN BIOSCIENCES
- Genome-wide assays that identify and quantify modified cytosines in human disease studies
- (2015) Netha Ulahannan et al. Epigenetics & Chromatin
- Traumatic stress and human DNA methylation: a critical review
- (2015) Christiaan H Vinkers et al. Epigenomics
- Origins and Impacts of New Mammalian Exons
- (2015) Jason J. Merkin et al. Cell Reports
- DNA methylation dynamics in muscle development and disease
- (2015) Elvira Carrió Frontiers in Aging Neuroscience
- Alternative translational initiation of ATP sulfurylase underlying dual localization of sulfate assimilation pathways in plastids and cytosol in Arabidopsis thaliana
- (2015) Anne-Sophie Bohrer et al. Frontiers in Plant Science
- GeMes, Clusters of DNA Methylation under Genetic Control, Can Inform Genetic and Epigenetic Analysis of Disease
- (2014) Yun Liu et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Role of the 5′-untranslated regions in post-transcriptional regulation of the human glucocorticoid receptor
- (2014) Jonathan D. Turner et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Reference-free cell mixture adjustments in analysis of DNA methylation data
- (2014) Eugene Andres Houseman et al. BIOINFORMATICS
- Improved reporting of DNA methylation data derived from studies of the human placenta
- (2014) Kirsten Hogg et al. Epigenetics
- Evolution at protein ends: major contribution of alternative transcription initiation and termination to the transcriptome and proteome diversity in mammals
- (2014) S. A. Shabalina et al. NUCLEIC ACIDS RESEARCH
- Identification of Genomic Features in Environmentally Induced Epigenetic Transgenerational Inherited Sperm Epimutations
- (2014) Carlos Guerrero-Bosagna et al. PLoS One
- DNA methylation of BDNF as a biomarker of early-life adversity
- (2014) Marija Kundakovic et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts
- (2014) James R Wagner et al. GENOME BIOLOGY
- Epigenetic modulation of glucocorticoid receptors in posttraumatic stress disorder
- (2014) B Labonté et al. Translational Psychiatry
- DNA Methylation Biomarkers: Cancer and Beyond
- (2014) Thomas Mikeska et al. Genes
- Intergenerational Health Responses to Adverse and Enriched Environments
- (2013) Lars Olov Bygren Annual Review of Public Health
- Genetic and non-genetic instability in tumor progression: link between the fitness landscape and the epigenetic landscape of cancer cells
- (2013) Sui Huang CANCER AND METASTASIS REVIEWS
- Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm
- (2013) B. Zhang et al. GENOME RESEARCH
- Glucocorticoid receptor gene expression and promoter CpG modifications throughout the human brain
- (2013) Lei Cao-Lei et al. JOURNAL OF PSYCHIATRIC RESEARCH
- Membrane Glucocorticoid Receptor Activation Induces Proteomic Changes Aligning with Classical Glucocorticoid Effects
- (2013) Sara Vernocchi et al. MOLECULAR & CELLULAR PROTEOMICS
- Antenatal prediction of postpartum depression with blood DNA methylation biomarkers
- (2013) J Guintivano et al. MOLECULAR PSYCHIATRY
- Recommendations for the design and analysis of epigenome-wide association studies
- (2013) Karin B Michels et al. NATURE METHODS
- DNA Methylation in the Neuropeptide S Receptor 1 (NPSR1) Promoter in Relation to Asthma and Environmental Factors
- (2013) Lovisa E. Reinius et al. PLoS One
- Biomarker or pathophysiology? The role of DNA methylation in postpartum depression
- (2013) Mary Kimmel et al. Epigenomics
- Differential Glucocorticoid Receptor Exon 1B, 1C, and 1H Expression and Methylation in Suicide Completers with a History of Childhood Abuse
- (2012) Benoit Labonte et al. BIOLOGICAL PSYCHIATRY
- DNA methylation arrays as surrogate measures of cell mixture distribution
- (2012) Eugene Houseman et al. BMC BIOINFORMATICS
- Regulation of eukaryotic gene expression by the untranslated gene regions and other non-coding elements
- (2012) Lucy W. Barrett et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Depression in pregnancy, infant birth weight and DNA methylation of imprint regulatory elements
- (2012) Ying Liu et al. Epigenetics
- Epigenetic regulation of theglucocorticoid receptorpromoter 17in adult rats
- (2012) Simone R. Witzmann et al. Epigenetics
- Basic concepts of epigenetics
- (2012) Elizabeth A. Mazzio et al. Epigenetics
- The Effect of Nutrition during Early Life on the Epigenetic Regulation of Transcription and Implications for Human Diseases
- (2012) Karen A. Lillycrop et al. Journal of Nutrigenetics and Nutrigenomics
- Landscape of transcription in human cells
- (2012) Sarah Djebali et al. NATURE
- Functions of DNA methylation: islands, start sites, gene bodies and beyond
- (2012) Peter A. Jones NATURE REVIEWS GENETICS
- Childhood Adversity and Epigenetic Modulation of the Leukocyte Glucocorticoid Receptor: Preliminary Findings in Healthy Adults
- (2012) Audrey R. Tyrka et al. PLoS One
- Conserved epigenetic sensitivity to early life experience in the rat and human hippocampus
- (2012) M. Suderman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Effects of Genotype and Child Abuse on DNA Methylation and Gene Expression at the Serotonin Transporter
- (2012) Meeshanthini Vijayendran et al. Frontiers in Psychiatry
- Maternal High-Fat Diet Effects on Third-Generation Female Body Size via the Paternal Lineage
- (2011) Gregory A. Dunn et al. ENDOCRINOLOGY
- A novel approach identifies new differentially methylated regions (DMRs) associated with imprinted genes
- (2011) S. Choufani et al. GENOME RESEARCH
- Alternative transcription exceeds alternative splicing in generating the transcriptome diversity of cerebellar development
- (2011) Sharmistha Pal et al. GENOME RESEARCH
- Transcriptional control of the human glucocorticoid receptor: identification and analysis of alternative promoter regions
- (2011) Lei Cao-Lei et al. HUMAN GENETICS
- The growing role of gene methylation on endocrine function
- (2011) Verónica García-Carpizo et al. JOURNAL OF MOLECULAR ENDOCRINOLOGY
- Hungry in the womb: What are the consequences? Lessons from the Dutch famine
- (2011) Tessa J. Roseboom et al. MATURITAS
- Redox Proteomics of Protein-bound Methionine Oxidation
- (2011) Bart Ghesquière et al. MOLECULAR & CELLULAR PROTEOMICS
- Epigenome-wide association studies for common human diseases
- (2011) Vardhman K. Rakyan et al. NATURE REVIEWS GENETICS
- Genome-wide quantitative assessment of variation in DNA methylation patterns
- (2011) Hehuang Xie et al. NUCLEIC ACIDS RESEARCH
- Broad Epigenetic Signature of Maternal Care in the Brain of Adult Rats
- (2011) Patrick O. McGowan et al. PLoS One
- Effect of maternal diet on the epigenome: implications for human metabolic disease
- (2011) Karen A. Lillycrop PROCEEDINGS OF THE NUTRITION SOCIETY
- Analysis of DNA Methylation in a Three-Generation Family Reveals Widespread Genetic Influence on Epigenetic Regulation
- (2011) Jason Gertz et al. PLoS Genetics
- Insufficient DNA methylation affects healthy aging and promotes age-related health problems
- (2011) Liang Liu et al. Clinical Epigenetics
- DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines
- (2011) Jordana T Bell et al. GENOME BIOLOGY
- Allelic Skewing of DNA Methylation Is Widespread across the Genome
- (2010) Leonard C. Schalkwyk et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Increased BDNF Promoter Methylation in the Wernicke Area of Suicide Subjects
- (2010) Simona Keller et al. ARCHIVES OF GENERAL PSYCHIATRY
- Transcriptional control of the glucocorticoid receptor: CpG islands, epigenetics and more
- (2010) Jonathan D. Turner et al. BIOCHEMICAL PHARMACOLOGY
- Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
- (2010) Pan Du et al. BMC BIOINFORMATICS
- DNA methylation as a universal biomarker
- (2010) Victor V Levenson EXPERT REVIEW OF MOLECULAR DIAGNOSTICS
- Connections between Alternative Transcription and Alternative Splicing in Mammals
- (2010) Svetlana A. Shabalina et al. Genome Biology and Evolution
- Environmental epigenetics of asthma: An update
- (2010) Shuk-Mei Ho JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
- Resilience to social stress coincides with functional DNA methylation of the Crf gene in adult mice
- (2010) Evan Elliott et al. NATURE NEUROSCIENCE
- Epigenetic Transgenerational Actions of Vinclozolin on Promoter Regions of the Sperm Epigenome
- (2010) Carlos Guerrero-Bosagna et al. PLoS One
- Prenatal Exposure to Maternal Depressed Mood and the MTHFR C677T Variant Affect SLC6A4 Methylation in Infants at Birth
- (2010) Angela M. Devlin et al. PLoS One
- Developmental origins of health and disease: reducing the burden of chronic disease in the next generation
- (2010) Peter D Gluckman et al. Genome Medicine
- Methylation at SLC6A4 is linked to family history of child abuse: An examination of the Iowa Adoptee sample
- (2009) Steven R.H. Beach et al. AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS
- Lasting Epigenetic Influence of Early-Life Adversity on the BDNF Gene
- (2009) Tania L. Roth et al. BIOLOGICAL PSYCHIATRY
- Pervasive transcription constitutes a new level of eukaryotic genome regulation
- (2009) Julia Berretta et al. EMBO REPORTS
- Maternal High-Fat Diet Promotes Body Length Increases and Insulin Insensitivity in Second-Generation Mice
- (2009) Gregory A. Dunn et al. ENDOCRINOLOGY
- DNA methylation differences after exposure to prenatal famine are common and timing- and sex-specific
- (2009) Elmar W. Tobi et al. HUMAN MOLECULAR GENETICS
- Hypothalamic proopiomelanocortin promoter methylation becomes altered by early overfeeding: an epigenetic model of obesity and the metabolic syndrome
- (2009) Andreas Plagemann et al. JOURNAL OF PHYSIOLOGY-LONDON
- Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells
- (2009) Madeleine P Ball et al. NATURE BIOTECHNOLOGY
- Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse
- (2009) Patrick O McGowan et al. NATURE NEUROSCIENCE
- Dynamic DNA methylation programs persistent adverse effects of early-life stress
- (2009) Chris Murgatroyd et al. NATURE NEUROSCIENCE
- MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome
- (2009) David Serre et al. NUCLEIC ACIDS RESEARCH
- Participation of Leaky Ribosome Scanning in Protein Dual Targeting by Alternative Translation Initiation in Higher Plants
- (2009) Y. Wamboldt et al. PLANT CELL
- Differential expression of glucocorticoid receptor transcripts in major depressive disorder is not epigenetically programmed
- (2009) Simone R. Alt et al. PSYCHONEUROENDOCRINOLOGY
- A conceptual framework for the developmental origins of health and disease
- (2009) P. D. Gluckman et al. Journal of Developmental Origins of Health and Disease
- Epigenetic Profiles Distinguish Pleural Mesothelioma from Normal Pleura and Predict Lung Asbestos Burden and Clinical Outcome
- (2008) B. C. Christensen et al. CANCER RESEARCH
- DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression
- (2008) S. Yagi et al. GENOME RESEARCH
- Intra-individual Change Over Time in DNA Methylation With Familial Clustering
- (2008) Hans T. Bjornsson JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Dissociation between the prevalence of atopy and allergic disease in rural China among children and adults
- (2008) Jennifer S. Kim et al. JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
- Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation
- (2008) Kristi Kerkel et al. NATURE GENETICS
- Highly individual methylation patterns of alternative glucocorticoid receptor promoters suggest individualized epigenetic regulatory mechanisms
- (2008) J. D. Turner et al. NUCLEIC ACIDS RESEARCH
- Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping
- (2008) Christoph Bock et al. NUCLEIC ACIDS RESEARCH
- Persistent epigenetic differences associated with prenatal exposure to famine in humans
- (2008) B. T. Heijmans et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The HPA axis in major depression: classical theories and new developments
- (2008) Carmine M. Pariante et al. TRENDS IN NEUROSCIENCES
- A Novel CpG Island Set Identifies Tissue-Specific Methylation at Developmental Gene Loci
- (2008) Robert Illingworth et al. PLOS BIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started