Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates

What you need is what you eat? Prey selection by the bat Myotis daubentonii

(2016) Eero J. Vesterinen et al.   MOLECULAR ECOLOGY

Simultaneous DNA-based diet analysis of breeding, non-breeding and chick Adélie penguins

(2016) Julie C. McInnes et al.   Royal Society Open Science

DNA metabarcoding diet analysis for species with parapatric vs sympatric distribution: a case study on subterranean rodents

(2015) C M Lopes et al.   HEREDITY

Molecular detection of invertebrate prey in vertebrate diets: trophic ecology of Caribbean island lizards

(2015) Tyler R. Kartzinel et al.   Molecular Ecology Resources

DNA metabarcoding illuminates dietary niche partitioning by African large herbivores

(2015) Tyler R. Kartzinel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

From Benchtop to Desktop: Important Considerations when Designing Amplicon Sequencing Workflows

(2015) Dáithí C. Murray et al.   PLoS One

Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers

(2014) Kenan Hadziavdic et al.   PLoS One

Evaluating DNA degradation rates in faecal pellets of the endangered pygmy rabbit

(2013) Stephanie M. DeMay et al.   Molecular Ecology Resources

Adélie Penguin Population Diet Monitoring by Analysis of Food DNA in Scats

(2013) Simon N. Jarman et al.   PLoS One

From Puffins to Plankton: A DNA-Based Analysis of a Seabird Food Chain in the Northern Gulf of Maine

(2013) A. Kirsten Bowser et al.   PLoS One

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Determining the Diet of Larvae of Western Rock Lobster (Panulirus cygnus) Using High-Throughput DNA Sequencing Techniques

(2012) Richard O'Rorke et al.   PLoS One

Factors influencing degradation of DNA and hormones in maned wolf scat

(2011) C. Vynne et al.   ANIMAL CONSERVATION

Evaluation of fecal DNA preservation techniques and effects of sample age and diet on genotyping success

(2011) Michael Panasci et al.   JOURNAL OF WILDLIFE MANAGEMENT

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

PCR enrichment techniques to identify the diet of predators

(2011) R. O’RORKE et al.   Molecular Ecology Resources

Molecular scatology: how to improve prey DNA detection success in avian faeces?

(2011) JOHANNES OEHM et al.   Molecular Ecology Resources

DNA-Based Faecal Dietary Analysis: A Comparison of qPCR and High Throughput Sequencing Approaches

(2011) Dáithí C. Murray et al.   PLoS One

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?

(2010) Bruce E. Deagle et al.   CONSERVATION GENETICS

Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces

(2010) MATT R. K. ZEALE et al.   Molecular Ecology Resources

Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces

(2009) BRUCE E. DEAGLE et al.   MOLECULAR ECOLOGY

The influence of seabird nutrient enrichment and grazing on the structure and function of island soil food webs

(2009) Daniel G. Wright et al.   SOIL BIOLOGY & BIOCHEMISTRY

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL

Quantitative analysis of the use of discards from squid trawlers by Black-browed Albatrosses Diomedea melanophris in the vicinity of the Falkland Islands

(2008) K. R. THOMPSON   IBIS

Foraging movements of the Shy Albatross Diomedea cauta breeding in Australia; implications for interactions with longline fisheries

(2008) NIGEL BROTHERS et al.   IBIS

INVITED REVIEW: Molecular analysis of predation: a review of best practice for DNA-based approaches

(2008) R. A. KING et al.   MOLECULAR ECOLOGY