Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing
出版年份 2016 全文链接
标题
Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing
作者
关键词
-
出版物
Nature Communications
Volume 7, Issue -, Pages 11708
出版商
Springer Nature
发表日期
2016-06-24
DOI
10.1038/ncomms11708
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Large-scale genetic analysis of chloroplast biogenesis in maize
- (2015) Susan Belcher et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- DNA methylation and gene expression in Mimulus guttatus
- (2015) Jack M. Colicchio et al. BMC GENOMICS
- Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing
- (2015) Sean P. Gordon et al. PLoS One
- PLEK: a tool for predicting long non-coding RNAs and messenger RNAs based on an improved k-mer scheme
- (2014) Aimin Li et al. BMC BIOINFORMATICS
- The InterPro protein families database: the classification resource after 15 years
- (2014) Alex Mitchell et al. NUCLEIC ACIDS RESEARCH
- Insights into the Maize Pan-Genome and Pan-Transcriptome
- (2014) C. N. Hirsch et al. PLANT CELL
- Dynamic Transcriptome Landscape of Maize Embryo and Endosperm Development
- (2014) Jian Chen et al. PLANT PHYSIOLOGY
- Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes
- (2014) MeiYee Law et al. PLANT PHYSIOLOGY
- Defining a personal, allele-specific, and single-molecule long-read transcriptome
- (2014) Hagen Tilgner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing
- (2014) Barbara Treutlein et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-wide discovery and characterization of maize long non-coding RNAs
- (2014) Lin Li et al. GENOME BIOLOGY
- Orchestrated Intron Retention Regulates Normal Granulocyte Differentiation
- (2013) Justin J.-L. Wong et al. CELL
- The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA
- (2013) M. Regulski et al. GENOME RESEARCH
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Alternative splicing: a pivotal step between eukaryotic transcription and translation
- (2013) Alberto R. Kornblihtt et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Gramene 2013: comparative plant genomics resources
- (2013) Marcela K. Monaco et al. NUCLEIC ACIDS RESEARCH
- A Major Facilitator Superfamily Transporter Plays a Dual Role in Polar Auxin Transport and Drought Stress Tolerance in Arabidopsis
- (2013) E. Remy et al. PLANT CELL
- Alternative Splicing at the Intersection of Biological Timing, Development, and Stress Responses
- (2013) D. Staiger et al. PLANT CELL
- Complexity of the Alternative Splicing Landscape in Plants
- (2013) A. S. N. Reddy et al. PLANT CELL
- The Differential Transcription Network between Embryo and Endosperm in the Early Developing Maize Seed
- (2013) X. Lu et al. PLANT PHYSIOLOGY
- Alternative splicing of transcription factors in plant responses to low temperature stress: mechanisms and functions
- (2013) Pil Joon Seo et al. PLANTA
- Characterization of the human ESC transcriptome by hybrid sequencing
- (2013) K. F. Au et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Unraveling the KNOTTED1 regulatory network in maize meristems
- (2012) N. Bolduc et al. GENES & DEVELOPMENT
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Genome-Wide Analysis Uncovers Regulation of Long Intergenic Noncoding RNAs in Arabidopsis
- (2012) J. Liu et al. PLANT CELL
- Identification and characterization of wheat long non-protein coding RNAs responsive to powdery mildew infection and heat stress by using microarray analysis and SBS sequencing
- (2011) Mingming Xin et al. BMC PLANT BIOLOGY
- Functional consequences of developmentally regulated alternative splicing
- (2011) Auinash Kalsotra et al. NATURE REVIEWS GENETICS
- Regulated functional alternative splicing in Drosophila
- (2011) J. P. Venables et al. NUCLEIC ACIDS RESEARCH
- Maize Rough Endosperm3 Encodes an RNA Splicing Factor Required for Endosperm Cell Differentiation and Has a Nonautonomous Effect on Embryo Development
- (2011) R. Fouquet et al. PLANT CELL
- Genome-wide atlas of transcription during maize development
- (2011) Rajandeep S. Sekhon et al. PLANT JOURNAL
- The developmental dynamics of the maize leaf transcriptome
- (2010) Pinghua Li et al. NATURE GENETICS
- Alternative splicing and evolution: diversification, exon definition and function
- (2010) Hadas Keren et al. NATURE REVIEWS GENETICS
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Evidence-based gene predictions in plant genomes
- (2009) C. Liang et al. GENOME RESEARCH
- The B73 Maize Genome: Complexity, Diversity, and Dynamics
- (2009) P. S. Schnable et al. SCIENCE
- The Physical and Genetic Framework of the Maize B73 Genome
- (2009) Fusheng Wei et al. PLoS Genetics
- Sequencing, Mapping, and Analysis of 27,455 Maize Full-Length cDNAs
- (2009) Carol Soderlund et al. PLoS Genetics
- A Genome-Wide Characterization of MicroRNA Genes in Maize
- (2009) Lifang Zhang et al. PLoS Genetics
- Genome-wide analyses of alternative splicing in plants: Opportunities and challenges
- (2008) W. B. Barbazuk et al. GENOME RESEARCH
- Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
- (2008) Qun Pan et al. NATURE GENETICS
- Insights into corn genes derived from large-scale cDNA sequencing
- (2008) Nickolai N. Alexandrov et al. PLANT MOLECULAR BIOLOGY
- Annotating genomes with massive-scale RNA sequencing
- (2008) France Denoeud et al. GENOME BIOLOGY
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