Maternal stress has divergent effects on gene expression patterns in the brains of male and female threespine stickleback

Maternal programming of offspring hypothalamic–pituitary–interrenal axis in wild sockeye salmon (Oncorhynchus nerka)

(2017) N.M. Sopinka et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Comparison of normalization and differential expression analyses using RNA-Seq data from 726 individual Drosophila melanogaster

(2016) Yanzhu Lin et al.   BMC GENOMICS

Conserved structure and expression of hsp70 paralogs in teleost fishes

(2016) David C.H. Metzger et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Transgenerational effects persist down the maternal line in marine sticklebacks: gene expression matches physiology in a warming ocean

(2016) Lisa N.S. Shama et al.   Evolutionary Applications

Sex differences in DNA methylation and expression in zebrafish brain: a test of an extended ‘male sex drive’ hypothesis

(2016) Aniruddha Chatterjee et al.   GENE

A universal and reliable assay for molecular sex identification of three-spined sticklebacks (Gasterosteus aculeatus)

(2016) E.-A. Toli et al.   Molecular Ecology Resources

Phenotypic plasticity of the threespine sticklebackGasterosteus aculeatus telencephalonin response to experience in captivity

(2016) Peter J. Park et al.   Current Zoology

The omniscient placenta: Metabolic and epigenetic regulation of fetal programming

(2015) Bridget M. Nugent et al.   FRONTIERS IN NEUROENDOCRINOLOGY

Experimental evidence for sex-specific plasticity in adult brain

(2015) Gábor Herczeg et al.   Frontiers in Zoology

Spatial Dynamics of Evolving Dosage Compensation in a Young Sex Chromosome System

(2015) Roland Schultheiß et al.   Genome Biology and Evolution

Bet hedging in a warming ocean: predictability of maternal environment shapes offspring size variation in marine sticklebacks

(2015) Lisa N. S. Shama   GLOBAL CHANGE BIOLOGY

Transcriptomic Analyses Reveal Novel Genes with Sexually Dimorphic Expression in Yellow Catfish (Pelteobagrus fulvidraco) Brain

(2015) Jianguo Lu et al.   MARINE BIOTECHNOLOGY

Purifying Selection Maintains Dosage-Sensitive Genes during Degeneration of the Threespine Stickleback Y Chromosome

(2015) Michael A. White et al.   MOLECULAR BIOLOGY AND EVOLUTION

Epigenetic and transgenerational reprogramming of brain development

(2015) Tracy L. Bale   NATURE REVIEWS NEUROSCIENCE

Glucocorticoid receptor gene (NR3C1) methylation processes as mediators of early adversity in stress-related disorders causality: A critical review

(2015) Helena Palma-Gudiel et al.   NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS

Stress-induced perinatal and transgenerational epigenetic programming of brain development and mental health

(2015) Olena Babenko et al.   NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS

Quantitative genetic analysis of brain size variation in sticklebacks: support for the mosaic model of brain evolution

(2015) Kristina Noreikiene et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

PROPER: comprehensive power evaluation for differential expression using RNA-seq

(2014) Hao Wu et al.   BIOINFORMATICS

The sex-specific transcriptome of the hermaphrodite sparid sharpsnout seabream (Diplodus puntazzo)

(2014) Tereza Manousaki et al.   BMC GENOMICS

Transcriptome assemblies for studying sex-biased gene expression in the guppy, Poecilia reticulata

(2014) Eshita Sharma et al.   BMC GENOMICS

Transgenerational plasticity in marine sticklebacks: maternal effects mediate impacts of a warming ocean

(2014) Lisa N. S. Shama et al.   FUNCTIONAL ECOLOGY

Grandparental effects in marine sticklebacks: transgenerational plasticity across multiple generations

(2014) L. N. S. Shama et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Evidence for sex-specific selection in brain: a case study of the nine-spined stickleback

(2014) G. Herczeg et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Normalization of RNA-seq data using factor analysis of control genes or samples

(2014) Davide Risso et al.   NATURE BIOTECHNOLOGY

Robustly detecting differential expression in RNA sequencing data using observation weights

(2014) Xiaobei Zhou et al.   NUCLEIC ACIDS RESEARCH

Power analysis and sample size estimation for RNA-Seq differential expression

(2014) Travers Ching et al.   RNA

Reversed brain size sexual dimorphism accompanies loss of parental care in white sticklebacks

(2014) Kieran Samuk et al.   Ecology and Evolution

Developmental programming of the HPA and HPG axes by early-life stress in male and female song sparrows

(2013) Kim L. Schmidt et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Annotated genes and nonannotated genomes: cross-species use of Gene Ontology in ecology and evolution research

(2013) C. R. Primmer et al.   MOLECULAR ECOLOGY

A test of maternal programming of offspring stress response to predation risk in threespine sticklebacks

(2013) Brett C. Mommer et al.   PHYSIOLOGY & BEHAVIOR

Determining the adaptive potential of maternal stress

(2012) M. J. Sheriff et al.   ECOLOGY LETTERS

Sex Differences in the Brain: The Not So Inconvenient Truth

(2012) M. M. McCarthy et al.   JOURNAL OF NEUROSCIENCE

Extreme Sexual Brain Size Dimorphism in Sticklebacks: A Consequence of the Cognitive Challenges of Sex and Parenting?

(2012) Alexander Kotrschal et al.   PLoS One

Mothers Forewarn Offspring about Predators: A Transgenerational Maternal Effect on Behavior

(2010) Jonathan J. Storm et al.   AMERICAN NATURALIST

Prenatal exposure to maternal depression, neonatal methylation of human glucocorticoid receptor gene (NR3C1) and infant cortisol stress responses

(2010) Tim F. Oberlander et al.   Epigenetics

Variation of telencephalon morphology of the threespine stickleback (Gasterosteus aculeatus) in relation to inferred ecology

(2010) P. J. PARK et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Female-Biased Expression on the X Chromosome as a Key Step in Sex Chromosome Evolution in Threespine Sticklebacks

(2010) Erica H. Leder et al.   MOLECULAR BIOLOGY AND EVOLUTION

Female sticklebacks transfer information via eggs: effects of maternal experience with predators on offspring

(2010) E. R. Giesing et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Evidence for small scale variation in the vertebrate brain: mating strategy and sex affect brain size and structure in wild brown trout (Salmo trutta)

(2009) N. KOLM et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Dynamic DNA methylation programs persistent adverse effects of early-life stress

(2009) Chris Murgatroyd et al.   NATURE NEUROSCIENCE

Sex differences in molecular neuroscience: from fruit flies to humans

(2009) Elena Jazin et al.   NATURE REVIEWS NEUROSCIENCE

Habitat-dependent and -independent plastic responses to social environment in the nine-spined stickleback (Pungitius pungitius) brain

(2009) A. Gonda et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Maternal Effects as Generators of Evolutionary Change

(2008) Alexander V. Badyaev   Annals of the New York Academy of Sciences

Sexually dimorphic gene expression in the brains of mature zebrafish

(2008) Eduarda M. Santos et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Transcriptomic Analyses Reveal Novel Genes with Sexually Dimorphic Expression in the Zebrafish Gonad and Brain

(2008) Rajini Sreenivasan et al.   PLoS One

Proliferation, neurogenesis and regeneration in the non-mammalian vertebrate brain

(2007) J. Kaslin et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES