标题
Structure of a low-population binding intermediate in protein-RNA recognition
作者
关键词
-
出版物
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 113, Issue 26, Pages 7171-7176
出版商
Proceedings of the National Academy of Sciences
发表日期
2016-06-11
DOI
10.1073/pnas.1521349113
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Characterizing excited conformational states of RNA by NMR spectroscopy
- (2015) Bo Zhao et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Can We Execute Stable Microsecond-Scale Atomistic Simulations of Protein–RNA Complexes?
- (2015) M. Krepl et al. Journal of Chemical Theory and Computation
- Comment on “A Tensor-Free Method for the Structural and Dynamic Refinement of Proteins using Residual Dipolar Couplings”
- (2015) Lukas N. Wirz et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Reply to “Comment on ‘A Tensor-Free Method for the Structural and Dynamic Refinement of Proteins using Residual Dipolar Couplings’”
- (2015) Carlo Camilloni et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Molecular Dynamics of Biomolecules through Direct Analysis of Dipolar Couplings
- (2015) Simon Olsson et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Recurrent turnover of senescent cells during regeneration of a complex structure
- (2015) Maximina H Yun et al. eLife
- A Tensor-Free Method for the Structural and Dynamical Refinement of Proteins using Residual Dipolar Couplings
- (2014) Carlo Camilloni et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Statistical Mechanics of the Denatured State of a Protein Using Replica-Averaged Metadynamics
- (2014) Carlo Camilloni et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Cyclophilin A catalyzes proline isomerization by an electrostatic handle mechanism
- (2014) C. Camilloni et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Combining Experiments and Simulations Using the Maximum Entropy Principle
- (2014) Wouter Boomsma et al. PLoS Computational Biology
- PLUMED 2: New feathers for an old bird
- (2013) Gareth A. Tribello et al. COMPUTER PHYSICS COMMUNICATIONS
- A method of determining RNA conformational ensembles using structure-based calculations of residual dipolar couplings
- (2013) Aditi N. Borkar et al. JOURNAL OF CHEMICAL PHYSICS
- On the statistical equivalence of restrained-ensemble simulations with the maximum entropy method
- (2013) Benoît Roux et al. JOURNAL OF CHEMICAL PHYSICS
- Molecular dynamics simulations with replica-averaged structural restraints generate structural ensembles according to the maximum entropy principle
- (2013) Andrea Cavalli et al. JOURNAL OF CHEMICAL PHYSICS
- Replica-Averaged Metadynamics
- (2013) Carlo Camilloni et al. Journal of Chemical Theory and Computation
- NMR studies of nucleic acid dynamics
- (2013) Hashim M. Al-Hashimi JOURNAL OF MAGNETIC RESONANCE
- A General Method for Constructing Atomic-Resolution RNA Ensembles using NMR Residual Dipolar Couplings: The Basis for Interhelical Motions Revealed
- (2013) Loïc Salmon et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers
- (2013) A. Sekhar et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Independent alignment of RNA for dynamic studies using residual dipolar couplings
- (2012) Michael F. Bardaro et al. JOURNAL OF BIOMOLECULAR NMR
- Determination of structural fluctuations of proteins from structure-based calculations of residual dipolar couplings
- (2012) Rinaldo W. Montalvao et al. JOURNAL OF BIOMOLECULAR NMR
- On the Use of Experimental Observations to Bias Simulated Ensembles
- (2012) Jed W. Pitera et al. Journal of Chemical Theory and Computation
- Structure of an Intermediate State in Protein Folding and Aggregation
- (2012) P. Neudecker et al. SCIENCE
- METAGUI. A VMD interface for analyzing metadynamics and molecular dynamics simulations
- (2011) Xevi Biarnés et al. COMPUTER PHYSICS COMMUNICATIONS
- Performance of Molecular Mechanics Force Fields for RNA Simulations: Stability of UUCG and GNRA Hairpins
- (2010) Pavel Banáš et al. Journal of Chemical Theory and Computation
- Crystal structure of HIV-1 Tat complexed with human P-TEFb
- (2010) Tahir H. Tahirov et al. NATURE
- The Dynamic Landscapes of RNA Architecture
- (2009) José Almeida Cruz et al. CELL
- Theory, Practice, and Applications of Paramagnetic Relaxation Enhancement for the Characterization of Transient Low-Population States of Biological Macromolecules and Their Complexes
- (2009) G. Marius Clore et al. CHEMICAL REVIEWS
- How binding of small molecule and peptide ligands to HIV-1 TAR alters the RNA motional landscape
- (2009) Michael F. Bardaro et al. NUCLEIC ACIDS RESEARCH
- Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein
- (2009) A. Davidson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Characterizing Complex Dynamics in the Transactivation Response Element Apical Loop and Motional Correlations with the Bulge by NMR, Molecular Dynamics, and Mutagenesis
- (2008) Elizabeth A. Dethoff et al. BIOPHYSICAL JOURNAL
- GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
- (2008) Berk Hess et al. Journal of Chemical Theory and Computation
- Structural insights into the Cyclin T1–Tat–TAR RNA transcription activation complex from EIAV
- (2008) Kanchan Anand et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Metadynamics: a method to simulate rare events and reconstruct the free energy in biophysics, chemistry and material science
- (2008) Alessandro Laio et al. REPORTS ON PROGRESS IN PHYSICS
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