RNA-Seq Transcriptomic Responses of Full-Thickness Dermal Excision Wounds to Pseudomonas aeruginosa Acute and Biofilm Infection

Exacerbated and prolonged inflammation impairs wound healing and increases scarring

(2016) Li-Wu Qian et al.   WOUND REPAIR AND REGENERATION

Small RNAs: essential regulators of gene expression and defenses against environmental stresses in plants

(2016) Hsiao-Lin V. Wang et al.   Wiley Interdisciplinary Reviews-RNA

Stress response factors as hub-regulators of microRNA biogenesis: implication to the diseased heart

(2015) Veronika Gurianova et al.   CELL BIOCHEMISTRY AND FUNCTION

Intracellular Bacterial Pathogens Trigger the Formation of U Small Nuclear RNA Bodies (U Bodies) through Metabolic Stress Induction

(2015) Jessica Tsalikis et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

NetworkAnalyst for statistical, visual and network-based meta-analysis of gene expression data

(2015) Jianguo Xia et al.   Nature Protocols

Ensembl 2016

(2015) Andrew Yates et al.   NUCLEIC ACIDS RESEARCH

Potential role for snoRNAs in PKR activation during metabolic stress

(2015) Osama A. Youssef et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tissue-based map of the human proteome

(2015) M. Uhlen et al.   SCIENCE

The many faces of small nucleolar RNAs

(2014) Tomaž Bratkovič et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones

(2014) Thomas R. Cech et al.   CELL

ImmPort: disseminating data to the public for the future of immunology

(2014) Sanchita Bhattacharya et al.   IMMUNOLOGIC RESEARCH

The effects of pH on wound healing, biofilms, and antimicrobial efficacy

(2014) Steven L. Percival et al.   WOUND REPAIR AND REGENERATION

Evolution of Pseudomonas aeruginosa Virulence as a Result of Phage Predation

(2013) Zeinab Hosseinidoust et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Expression of neuropeptides and cytokines in a rabbit model of diabetic neuroischemic wound healing

(2013) Leena Pradhan Nabzdyk et al.   JOURNAL OF VASCULAR SURGERY

Ensembl 2014

(2013) Paul Flicek et al.   NUCLEIC ACIDS RESEARCH

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Quantitative Comparison and Analysis of Species-Specific Wound Biofilm Virulence Using an In Vivo, Rabbit-Ear Model

(2012) Akhil K. Seth et al.   JOURNAL OF THE AMERICAN COLLEGE OF SURGEONS

InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation

(2012) Karin Breuer et al.   NUCLEIC ACIDS RESEARCH

The eIF2 kinase PERK and the integrated stress response facilitate activation of ATF6 during endoplasmic reticulum stress

(2011) Brian F. Teske et al.   MOLECULAR BIOLOGY OF THE CELL

A Candidate Approach Implicates the Secreted Salmonella Effector Protein SpvB in P-Body Disassembly

(2011) Ana Eulalio et al.   PLoS One

Development of a novel, highly quantitative in vivo model for the study of biofilm-impaired cutaneous wound healing

(2011) Anandev N. Gurjala et al.   WOUND REPAIR AND REGENERATION

CD206-Positive M2 Macrophages That Express Heme Oxygenase-1 Protect Against Diabetic Gastroparesis in Mice

(2010) Kyoung Moo Choi et al.   GASTROENTEROLOGY

MicroRNA Functions in Stress Responses

(2010) Anthony K.L. Leung et al.   MOLECULAR CELL

Oxidative stress-induced alternative splicing of transformer 2β (SFRS10) and CD44 pre-mRNAs in gastric epithelial cells

(2009) Keiko Takeo et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The effect of pH in modulating skin cell behaviour

(2009) J.R. Sharpe et al.   BRITISH JOURNAL OF DERMATOLOGY

RNA-seq: from technology to biology

(2009) Samuel Marguerat et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Next-generation sequencing: applications beyond genomes

(2008) Samuel Marguerat et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Keratinocyte Migration, Proliferation, and Differentiation in Chronic Ulcers From Patients With Diabetes and Normal Wounds

(2008) Marcia L. Usui et al.   JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY

Inactivation of the SMN Complex by Oxidative Stress

(2008) Lili Wan et al.   MOLECULAR CELL

Wound repair and regeneration

(2008) Geoffrey C. Gurtner et al.   NATURE

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Macrophage activation and polarization

(2007) Fernando Oneissi Martinez   Frontiers in Bioscience-Landmark