Rapid identification of lettuce seed germination mutants by bulked segregant analysis and whole genome sequencing
出版年份 2016 全文链接
标题
Rapid identification of lettuce seed germination mutants by bulked segregant analysis and whole genome sequencing
作者
关键词
-
出版物
PLANT JOURNAL
Volume 88, Issue 3, Pages 345-360
出版商
Wiley
发表日期
2016-07-13
DOI
10.1111/tpj.13267
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Getting started in mapping-by-sequencing
- (2015) Héctor Candela et al. Journal of Integrative Plant Biology
- A System for Dosage-Based Functional Genomics in Poplar
- (2015) Isabelle M. Henry et al. PLANT CELL
- Two forward genetic screens for vein density mutants in sorghum converge on a cytochrome P450 gene in the brassinosteroid pathway
- (2015) Govinda Rizal et al. PLANT JOURNAL
- Genetic Variation for Thermotolerance in Lettuce Seed Germination Is Associated with Temperature-Sensitive Regulation of ETHYLENE RESPONSE FACTOR1 ( ERF1 )
- (2015) Fei-Yian Yoong et al. PLANT PHYSIOLOGY
- Mapping-by-Sequencing Identifies HvPHYTOCHROME C as a Candidate Gene for the early maturity 5 Locus Modulating the Circadian Clock and Photoperiodic Flowering in Barley
- (2014) Artem Pankin et al. GENETICS
- Using next-generation sequencing to isolate mutant genes from forward genetic screens
- (2014) Korbinian Schneeberger NATURE REVIEWS GENETICS
- Efficient Genome-Wide Detection and Cataloging of EMS-Induced Mutations Using Exome Capture and Next-Generation Sequencing
- (2014) I. M. Henry et al. PLANT CELL
- Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers
- (2013) Karl J V Nordström et al. NATURE BIOTECHNOLOGY
- Expression of 9-cis-EPOXYCAROTENOID DIOXYGENASE4 Is Essential for Thermoinhibition of Lettuce Seed Germination but Not for Seed Development or Stress Tolerance
- (2013) H. Huo et al. PLANT CELL
- An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce
- (2013) Maria José Truco et al. G3-Genes Genomes Genetics
- Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.)
- (2012) Kevin Stoffel et al. BMC GENOMICS
- The role of the Arabidopsis FUSCA3 transcription factor during inhibition of seed germination at high temperature
- (2012) Rex S Chiu et al. BMC PLANT BIOLOGY
- Genome sequencing reveals agronomically important loci in rice using MutMap
- (2012) Akira Abe et al. NATURE BIOTECHNOLOGY
- Fast Isogenic Mapping-by-Sequencing of Ethyl Methanesulfonate-Induced Mutant Bulks
- (2012) B. Hartwig et al. PLANT PHYSIOLOGY
- Gene Mapping via Bulked Segregant RNA-Seq (BSR-Seq)
- (2012) Sanzhen Liu et al. PLoS One
- Association Between Seed Dormancy and Pericarp Color Is Controlled by a Pleiotropic Gene That Regulates Abscisic Acid and Flavonoid Synthesis in Weedy Red Rice
- (2011) Xing-You Gu et al. GENETICS
- Inactivation of the ELIP1 and ELIP2 genes affects Arabidopsis seed germination
- (2011) Annalisa Rizza et al. NEW PHYTOLOGIST
- Nitrate, abscisic acid and gibberellin interactions on the thermoinhibition of lettuce seed germination
- (2011) Tingting Dong et al. PLANT GROWTH REGULATION
- Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members
- (2011) Anne Frey et al. PLANT JOURNAL
- Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis
- (2011) Kevin Ashelford et al. GENOME BIOLOGY
- Molecular cloning of Sdr4, a regulator involved in seed dormancy and domestication of rice
- (2010) K. Sugimoto et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A gene encoding an abscisic acid biosynthetic enzyme (LsNCED4) collocates with the high temperature germination locus Htg6.1 in lettuce (Lactuca sp.)
- (2010) Jason Argyris et al. THEORETICAL AND APPLIED GENETICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Mutation discovery for crop improvement
- (2009) M. A. J. Parry et al. JOURNAL OF EXPERIMENTAL BOTANY
- SHOREmap: simultaneous mapping and mutation identification by deep sequencing
- (2009) Korbinian Schneeberger et al. NATURE METHODS
- The Dof protein DAG1 mediates PIL5 activity on seed germination by negatively regulating GA biosynthetic gene AtGA3ox1
- (2009) Stefano Gabriele et al. PLANT JOURNAL
- Antagonism between abscisic acid and ethylene in Arabidopsis acts in parallel with the reciprocal regulation of their metabolism and signaling pathways
- (2009) Wan-Hsing Cheng et al. PLANT MOLECULAR BIOLOGY
- SOMNUS, a CCCH-Type Zinc Finger Protein in Arabidopsis, Negatively Regulates Light-Dependent Seed Germination Downstream of PIL5
- (2008) D. H. Kim et al. PLANT CELL
- The Gibberellic Acid Signaling Repressor RGL2 Inhibits Arabidopsis Seed Germination by Stimulating Abscisic Acid Synthesis and ABI5 Activity
- (2008) U. Piskurewicz et al. PLANT CELL
- Genetic Variation for Lettuce Seed Thermoinhibition Is Associated with Temperature-Sensitive Expression of Abscisic Acid, Gibberellin, and Ethylene Biosynthesis, Metabolism, and Response Genes
- (2008) J. Argyris et al. PLANT PHYSIOLOGY
- High Temperature-Induced Abscisic Acid Biosynthesis and Its Role in the Inhibition of Gibberellin Action in Arabidopsis Seeds
- (2007) S. Toh et al. PLANT PHYSIOLOGY
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