SNP2TFBS – a database of regulatory SNPs affecting predicted transcription factor binding site affinity
出版年份 2016 全文链接
标题
SNP2TFBS – a database of regulatory SNPs affecting predicted transcription factor binding site affinity
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 45, Issue D1, Pages D139-D144
出版商
Oxford University Press (OUP)
发表日期
2016-10-25
DOI
10.1093/nar/gkw1064
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- atSNP: transcription factor binding affinity testing for regulatory SNP detection
- (2015) Chandler Zuo et al. BIOINFORMATICS
- motifbreakR: an R/Bioconductor package for predicting variant effects at transcription factor binding sites: Fig. 1.
- (2015) Simon G. Coetzee et al. BIOINFORMATICS
- HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease
- (2015) Lucas D. Ward et al. NUCLEIC ACIDS RESEARCH
- Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
- (2015) Nuala A. O'Leary et al. NUCLEIC ACIDS RESEARCH
- JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
- (2015) Anthony Mathelier et al. NUCLEIC ACIDS RESEARCH
- The Genetic and Mechanistic Basis for Variation in Gene Regulation
- (2015) Athma A. Pai et al. PLoS Genetics
- Genetic variation in the non-coding genome: Involvement of micro-RNAs and long non-coding RNAs in disease
- (2014) Barbara Hrdlickova et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE
- Genetic and epigenetic fine mapping of causal autoimmune disease variants
- (2014) Kyle Kai-How Farh et al. NATURE
- Annotation of functional variation in personal genomes using RegulomeDB
- (2012) A. P. Boyle et al. GENOME RESEARCH
- Increased SRF transcriptional activity in human and mouse skeletal muscle is a signature of insulin resistance
- (2011) Wanzhu Jin et al. JOURNAL OF CLINICAL INVESTIGATION
- AlleleSeq: analysis of allele-specific expression and binding in a network framework
- (2011) J. Rozowsky et al. Molecular Systems Biology
- Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs
- (2011) Morgane Thomas-Chollier et al. Nature Protocols
- is-rSNP: a novel technique for in silico regulatory SNP detection
- (2010) Geoff Macintyre et al. BIOINFORMATICS
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
- (2010) K. Wang et al. NUCLEIC ACIDS RESEARCH
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- In Silico Detection of Sequence Variations Modifying Transcriptional Regulation
- (2008) Malin C. Andersen et al. PLoS Computational Biology
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