Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs
出版年份 2011 全文链接
标题
Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs
作者
关键词
-
出版物
Nature Protocols
Volume 6, Issue 12, Pages 1860-1869
出版商
Springer Nature
发表日期
2011-11-04
DOI
10.1038/nprot.2011.409
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Theoretical and empirical quality assessment of transcription factor-binding motifs
- (2011) Alejandra Medina-Rivera et al. NUCLEIC ACIDS RESEARCH
- RSAT 2011: regulatory sequence analysis tools
- (2011) M. Thomas-Chollier et al. NUCLEIC ACIDS RESEARCH
- Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
- (2010) Robert C McLeay et al. BMC BIOINFORMATICS
- Quantifying the effect of sequence variation on regulatory interactions
- (2010) Thomas Manke et al. HUMAN MUTATION
- Selective Glucocorticoid Receptor modulators
- (2010) Karolien De Bosscher JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters
- (2010) Hans-Jörg Warnatz et al. NUCLEIC ACIDS RESEARCH
- The UCSC Genome Browser database: update 2011
- (2010) P. A. Fujita et al. NUCLEIC ACIDS RESEARCH
- Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
- (2010) Jeremy Goecks et al. GENOME BIOLOGY
- Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention
- (2009) A. L. Hufton et al. GENOME RESEARCH
- Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation
- (2009) T. E. Reddy et al. GENOME RESEARCH
- A genome-wide association study identifies GLT6D1 as a susceptibility locus for periodontitis
- (2009) Arne S. Schaefer et al. HUMAN MOLECULAR GENETICS
- Paracrine control of oligodendrocyte differentiation by SRF-directed neuronal gene expression
- (2009) Christine Stritt et al. NATURE NEUROSCIENCE
- JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
- (2009) Elodie Portales-Casamar et al. NUCLEIC ACIDS RESEARCH
- PASTAA: identifying transcription factors associated with sets of co-regulated genes
- (2008) Helge G. Roider et al. BIOINFORMATICS
- Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules
- (2008) Jean-Valery Turatsinze et al. Nature Protocols
- Using RSAT oligo-analysis and dyad-analysis tools to discover regulatory signals in nucleic sequences
- (2008) Matthieu Defrance et al. Nature Protocols
- Statistical Modeling of Transcription Factor Binding Affinities Predicts Regulatory Interactions
- (2008) Thomas Manke et al. PLoS Computational Biology
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