Transcriptome and metabolome of syntheticSolanumautotetraploids reveal key genomic stress events following polyploidization

Digital gene expression analysis of gene expression differences within Brassica diploids and allopolyploids

(2015) Jinjin Jiang et al.   BMC PLANT BIOLOGY

Comparative metabolic and transcriptional analysis of a doubled diploid and its diploid citrus rootstock (C. junos cv. Ziyang xiangcheng) suggests its potential value for stress resistance improvement

(2015) Feng-Quan Tan et al.   BMC PLANT BIOLOGY

TheSolanum commersoniiGenome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives

(2015) Riccardo Aversano et al.   PLANT CELL

Polyploidy and the petal transcriptome of Gossypium

(2014) Aditi Rambani et al.   BMC PLANT BIOLOGY

Systematics, Diversity, Genetics, and Evolution of Wild and Cultivated Potatoes

(2014) David M. Spooner et al.   BOTANICAL REVIEW

Genotype-specific changes associated to early synthesis of autotetraploids in wild potato species

(2014) Riccardo Aversano et al.   EUPHYTICA

Differential Transcriptome Analysis between Paulownia fortunei and Its Synthesized Autopolyploid

(2014) Xiaoshen Zhang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Deciphering the molecular bases for drought tolerance inArabidopsisautotetraploids

(2014) JUAN C. DEL POZO et al.   PLANT CELL AND ENVIRONMENT

Novel aspects of glutamine synthetase (GS) regulation revealed by a detailed expression analysis of the entire GS gene family of Medicago truncatula under different physiological conditions

(2013) Ana R Seabra et al.   BMC PLANT BIOLOGY

Morphological, cytological and metabolic consequences of autopolyploidization in Hylocereus (Cactaceae) species

(2013) Hagai Cohen et al.   BMC PLANT BIOLOGY

Natural Pathways to Polyploidy in Plants and Consequences for Genome Reorganization

(2013) A. Tayalé et al.   CYTOGENETIC AND GENOME RESEARCH

Stochastic changes affect Solanum wild species following autopolyploidization

(2013) Riccardo Aversano et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genomic and epigenetic insights into the molecular bases of heterosis

(2013) Z. Jeffrey Chen   NATURE REVIEWS GENETICS

Contribution of subgenomes to the transcriptome and their intertwined regulation in the allopolyploidCoffea arabicagrown at contrasted temperatures

(2013) Marie-Christine Combes et al.   NEW PHYTOLOGIST

GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology

(2013) Živa Ramšak et al.   NUCLEIC ACIDS RESEARCH

Functional Characterization of the Plastidial 3-Phosphoglycerate Dehydrogenase Family in Arabidopsis

(2013) W. Toujani et al.   PLANT PHYSIOLOGY

Construction of Reference Chromosome-Scale Pseudomolecules for Potato: Integrating the Potato Genome with Genetic and Physical Maps

(2013) Sanjeev Kumar Sharma et al.   G3-Genes Genomes Genetics

Genome Microscale Heterogeneity among Wild Potatoes Revealed by Diversity Arrays Technology Marker Sequences

(2013) Alessandra Traini et al.   International Journal of Genomics

Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective

(2012) Aureliano Bombarely et al.   BMC GENOMICS

Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus

(2012) Janet Higgins et al.   BMC GENOMICS

Molecular Tools for Exploring Polyploid Genomes in Plants

(2012) Riccardo Aversano et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Partial deficiency of isoleucine impairs root development and alters transcript levels of the genes involved in branched-chain amino acid and glucosinolate metabolism in Arabidopsis

(2012) Hailan Yu et al.   JOURNAL OF EXPERIMENTAL BOTANY

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Plant LysM proteins: modules mediating symbiosis and immunity

(2012) Andrea A. Gust et al.   TRENDS IN PLANT SCIENCE

Secondary Metabolite Profile in Induced Tetraploids of Wild Solanum commersoniiDun.

(2011) Immacolata Caruso et al.   CHEMISTRY & BIODIVERSITY

Induction and Flow Cytometry Identification of Tetraploids from Seed-Derived Explants through Colchicine Treatments inCatharanthus roseus(L.) G. Don

(2011) Shi-Hai Xing et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

Large changes in anatomy and physiology between diploid Rangpur lime (Citrus limonia) and its autotetraploid are not associated with large changes in leaf gene expression

(2011) T. Allario et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Neurodegenerative-Disease-Related Protein Sacsin Is a Molecular Chaperone

(2011) John F. Anderson et al.   JOURNAL OF MOLECULAR BIOLOGY

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

Ancestral polyploidy in seed plants and angiosperms

(2011) Yuannian Jiao et al.   NATURE

Overproduction of artemisinin in tetraploid Artemisia annua L.

(2011) Waleerat Banyai et al.   Plant Biotechnology

The ascorbic acid content of tomato fruits is associated with the expression of genes involved in pectin degradation

(2010) Antonio Di Matteo et al.   BMC PLANT BIOLOGY

Oligonucleotide/oligosaccharide-binding fold proteins: a growing family of genome guardians

(2010) Rachel Litman Flynn et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling

(2010) Daniela Pignatta et al.   NEW PHYTOLOGIST

Evolutionary consequences of autopolyploidy

(2010) Christian Parisod et al.   NEW PHYTOLOGIST

Phenotypic and gene expression analyses of a ploidy series of maize inbred Oh43

(2010) Hong Yao et al.   PLANT MOLECULAR BIOLOGY

Transcriptional-Metabolic Networks in  -Carotene-Enriched Potato Tubers: The Long and Winding Road to the Golden Phenotype

(2010) G. Diretto et al.   PLANT PHYSIOLOGY

R2R3-NaMYB8 Regulates the Accumulation of Phenylpropanoid-Polyamine Conjugates, Which Are Essential for Local and Systemic Defense against Insect Herbivores in Nicotiana attenuata

(2010) H. Kaur et al.   PLANT PHYSIOLOGY

Impact of natural genetic variation on the transcriptome of autotetraploidArabidopsis thaliana

(2010) Zheng Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Modulated gene expression in newly synthesized auto-tetraploid of Papaver somniferum L.

(2010) B.K. Mishra et al.   SOUTH AFRICAN JOURNAL OF BOTANY

SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes

(2009) Nunzio D'Agostino et al.   BMC PLANT BIOLOGY

Genomic and expression plasticity of polyploidy

(2009) Scott Jackson et al.   CURRENT OPINION IN PLANT BIOLOGY

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

The frequency of polyploid speciation in vascular plants

(2009) T. E. Wood et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

(2009) J. A. Fawcett et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae)

(2008) M. L. Ainouche et al.   BIOLOGICAL INVASIONS

Articulation of three core metabolic processes in Arabidopsis: Fatty acid biosynthesis, leucine catabolism and starch metabolism

(2008) Wieslawa I Mentzen et al.   BMC PLANT BIOLOGY

Modulation of chlorogenic acid biosynthesis in Solanum lycopersicum; consequences for phenolic accumulation and UV-tolerance

(2008) Carla Clé et al.   PHYTOCHEMISTRY