标题
Fitness effects of mutations to SARS-CoV-2 proteins
作者
关键词
-
出版物
Virus Evolution
Volume 9, Issue 2, Pages -
出版商
Oxford University Press (OUP)
发表日期
2023-08-22
DOI
10.1093/ve/vead055
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A pseudovirus system enables deep mutational scanning of the full SARS-CoV-2 spike
- (2023) Bernadeta Dadonaite et al. CELL
- Evolution of the SARS-CoV-2 Mutational Spectrum
- (2023) Jesse D Bloom et al. MOLECULAR BIOLOGY AND EVOLUTION
- Transmissible SARS-CoV-2 variants with resistance to clinical protease inhibitors
- (2023) Seyed Arad Moghadasi et al. Science Advances
- Systematic Analyses of the Resistance Potential of Drugs Targeting SARS-CoV-2 Main Protease
- (2023) Julia M. Flynn et al. ACS Infectious Diseases
- Epistatic models predict mutable sites in SARS-CoV-2 proteins and epitopes
- (2022) Juan Rodriguez-Rivas et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Predicting the mutational drivers of future SARS-CoV-2 variants of concern
- (2022) M. Cyrus Maher et al. Science Translational Medicine
- Defining the risk of SARS-CoV-2 variants on immune protection
- (2022) Marciela M. DeGrace et al. NATURE
- Coronavirus Resistance Database (CoV-RDB): SARS-CoV-2 susceptibility to monoclonal antibodies, convalescent plasma, and plasma from vaccinated persons
- (2022) Philip L. Tzou et al. PLoS One
- Analysis of 6.4 million SARS-CoV-2 genomes identifies mutations associated with fitness
- (2022) Fritz Obermeyer et al. SCIENCE
- Functional map of SARS-CoV-2 3CL protease reveals tolerant and immutable sites
- (2022) Sho Iketani et al. Cell Host & Microbe
- Molecular adaptations during viral epidemics
- (2022) Nash D Rochman et al. EMBO REPORTS
- Shifting mutational constraints in the SARS-CoV-2 receptor-binding domain during viral evolution
- (2022) Tyler N. Starr et al. SCIENCE
- Comprehensive fitness landscape of SARS-CoV-2 Mpro reveals insights into viral resistance mechanisms
- (2022) Julia M Flynn et al. eLife
- SARS-CoV-2 variant spike and accessory gene mutations alter pathogenesis
- (2022) Marisa E. McGrath et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multiple pathways for SARS-CoV-2 resistance to nirmatrelvir
- (2022) Sho Iketani et al. NATURE
- Imprinted SARS-CoV-2 humoral immunity induces convergent Omicron RBD evolution
- (2022) Yunlong Cao et al. NATURE
- Compensatory epistasis maintains ACE2 affinity in SARS-CoV-2 Omicron BA.1
- (2022) Alief Moulana et al. Nature Communications
- Rational identification of potent and broad sarbecovirus-neutralizing antibody cocktails from SARS convalescents
- (2022) Yunlong Cao et al. Cell Reports
- Deep mutational scans for ACE2 binding, RBD expression, and antibody escape in the SARS-CoV-2 Omicron BA.1 and BA.2 receptor-binding domains
- (2022) Tyler N. Starr et al. PLoS Pathogens
- Biochemical and structural insights into SARS-CoV-2 polyprotein processing by Mpro
- (2022) Ruchi Yadav et al. Science Advances
- Comprehensive in vivo secondary structure of the SARS-CoV-2 genome reveals novel regulatory motifs and mechanisms
- (2021) Nicholas C. Huston et al. MOLECULAR CELL
- Broad and potent activity against SARS-like viruses by an engineered human monoclonal antibody
- (2021) C. Garrett Rappazzo et al. SCIENCE
- Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction
- (2021) Mukhtar Sadykov et al. Journal of Molecular Cell Biology
- Mutation rates and selection on synonymous mutations in SARS-CoV-2
- (2021) Nicola De Maio et al. Genome Biology and Evolution
- Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic
- (2021) Yatish Turakhia et al. NATURE GENETICS
- New SARS-CoV-2 Variants — Clinical, Public Health, and Vaccine Implications
- (2021) Salim S. Abdool Karim et al. NEW ENGLAND JOURNAL OF MEDICINE
- Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome
- (2021) Pramod R. Bhatt et al. SCIENCE
- The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages
- (2021) Darren P. Martin et al. CELL
- SARS-CoV-2 Antiviral Therapy
- (2021) Kaiming Tao et al. CLINICAL MICROBIOLOGY REVIEWS
- Shutting the gate before the horse has bolted: is it time for a conversation about SARS-CoV-2 and antiviral drug resistance?
- (2021) Julian A. Hiscox et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Contribution of SARS-CoV-2 Accessory Proteins to Viral Pathogenicity in K18 Human ACE2 Transgenic Mice
- (2021) Jesus A. Silvas et al. JOURNAL OF VIROLOGY
- A Daily-Updated Database and Tools for Comprehensive SARS-CoV-2 Mutation-Annotated Trees
- (2021) Jakob McBroome et al. MOLECULAR BIOLOGY AND EVOLUTION
- SARS-CoV-2 RBD antibodies that maximize breadth and resistance to escape
- (2021) Tyler N. Starr et al. NATURE
- SARS-CoV-2 variants, spike mutations and immune escape
- (2021) William T. Harvey et al. NATURE REVIEWS MICROBIOLOGY
- Conflicting and ambiguous names of overlapping ORFs in the SARS-CoV-2 genome: A homology-based resolution
- (2021) Irwin Jungreis et al. VIROLOGY
- Evolution of enhanced innate immune evasion by SARS-CoV-2
- (2021) Lucy G. Thorne et al. NATURE
- Rapid assessment of SARS-CoV-2–evolved variants using virus-like particles
- (2021) Abdullah M. Syed et al. SCIENCE
- Deep mutational scanning of SARS-CoV-2 receptor binding domain reveals constraints on folding and ACE2 binding
- (2020) Tyler N. Starr et al. CELL
- Betacoronavirus Genomes: How Genomic Information has been Used to Deal with Past Outbreaks and the COVID-19 Pandemic
- (2020) Alejandro Llanes et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2
- (2020) Yvonne C. F. Su et al. mBio
- Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution
- (2020) John Huddleston et al. eLife
- Complete Mapping of Mutations to the SARS-CoV-2 Spike Receptor-Binding Domain that Escape Antibody Recognition
- (2020) Allison J. Greaney et al. Cell Host & Microbe
- Stability of SARS-CoV-2 phylogenies
- (2020) Yatish Turakhia et al. PLoS Genetics
- Pervasive contingency and entrenchment in a billion years of Hsp90 evolution
- (2018) Tyler N. Starr et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variants
- (2018) Juhye M. Lee et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- GISAID: Global initiative on sharing all influenza data – from vision to reality
- (2017) Yuelong Shu et al. Eurosurveillance
- The Relationship between dN/dS and Scaled Selection Coefficients
- (2015) Stephanie J. Spielman et al. MOLECULAR BIOLOGY AND EVOLUTION
- Contingency and entrenchment in protein evolution under purifying selection
- (2015) Premal Shah et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The effects of a deleterious mutation load on patterns of influenza A/H3N2's antigenic evolution in humans
- (2015) Katia Koelle et al. eLife
- Accessory proteins of SARS-CoV and other coronaviruses
- (2014) Ding Xiang Liu et al. ANTIVIRAL RESEARCH
- A predictive fitness model for influenza
- (2014) Marta Łuksza et al. NATURE
- Virus-Based Transient Expression Vectors for Woody Crops: A New Frontier for Vector Design and Use
- (2013) William O. Dawson et al. Annual Review of Phytopathology
- Functional Analysis of the Murine Coronavirus Genomic RNA Packaging Signal
- (2013) L. Kuo et al. JOURNAL OF VIROLOGY
- Mutational and fitness landscapes of an RNA virus revealed through population sequencing
- (2013) Ashley Acevedo et al. NATURE
- Amino acid coevolution induces an evolutionary Stokes shift
- (2012) D. D. Pollock et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genetic Diversity in the 3′ Terminal 4.7-kb Region ofGrapevine leafroll-associated virus 3
- (2011) Jinbo Wang et al. PHYTOPATHOLOGY
- The Population Genetics of dN/dS
- (2008) Sergey Kryazhimskiy et al. PLoS Genetics
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