标题
Accounting for reciprocal host–microbiome interactions in experimental science
作者
关键词
-
出版物
NATURE
Volume 534, Issue 7606, Pages 191-199
出版商
Springer Nature
发表日期
2016-06-08
DOI
10.1038/nature18285
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- In This Issue
- (2016) CELL
- SIV Infection-Mediated Changes in Gastrointestinal Bacterial Microbiome and Virome Are Associated with Immunodeficiency and Prevented by Vaccination
- (2016) Scott A. Handley et al. Cell Host & Microbe
- Altered Virome and Bacterial Microbiome in Human Immunodeficiency Virus-Associated Acquired Immunodeficiency Syndrome
- (2016) Cynthia L. Monaco et al. Cell Host & Microbe
- Sequential Infection with Common Pathogens Promotes Human-like Immune Gene Expression and Altered Vaccine Response
- (2016) Tiffany A. Reese et al. Cell Host & Microbe
- Transkingdom control of viral infection and immunity in the mammalian intestine
- (2016) J. K. Pfeiffer et al. SCIENCE
- Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals
- (2015) James M. Beck et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Indigenous Bacteria from the Gut Microbiota Regulate Host Serotonin Biosynthesis
- (2015) Jessica M. Yano et al. CELL
- Microbiota-Modulated Metabolites Shape the Intestinal Microenvironment by Regulating NLRP6 Inflammasome Signaling
- (2015) Maayan Levy et al. CELL
- Gut Microbiota Orchestrates Energy Homeostasis during Cold
- (2015) Claire Chevalier et al. CELL
- Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease
- (2015) Jason M. Norman et al. CELL
- Non-lethal Inhibition of Gut Microbial Trimethylamine Production for the Treatment of Atherosclerosis
- (2015) Zeneng Wang et al. CELL
- Variation in the Human Immune System Is Largely Driven by Non-Heritable Influences
- (2015) Petter Brodin et al. CELL
- Colitogenic Bacteroides thetaiotaomicron Antigens Access Host Immune Cells in a Sulfatase-Dependent Manner via Outer Membrane Vesicles
- (2015) Christina A. Hickey et al. Cell Host & Microbe
- Control of Brain Development, Function, and Behavior by the Microbiome
- (2015) Timothy R. Sampson et al. Cell Host & Microbe
- Diet Dominates Host Genotype in Shaping the Murine Gut Microbiota
- (2015) Rachel N. Carmody et al. Cell Host & Microbe
- The Dynamics of the Human Infant Gut Microbiome in Development and in Progression toward Type 1 Diabetes
- (2015) Aleksandar D. Kostic et al. Cell Host & Microbe
- Gut-Pancreatic Axis AMPlified in Islets of Langerhans
- (2015) Stacy H. Ryu et al. IMMUNITY
- Cervicovaginal Bacteria Are a Major Modulator of Host Inflammatory Responses in the Female Genital Tract
- (2015) Melis N. Anahtar et al. IMMUNITY
- Pancreatic β-Cells Limit Autoimmune Diabetes via an Immunoregulatory Antimicrobial Peptide Expressed under the Influence of the Gut Microbiota
- (2015) Jia Sun et al. IMMUNITY
- Using Corticosteroids to Reshape the Gut Microbiome
- (2015) Edmond Y. Huang et al. INFLAMMATORY BOWEL DISEASES
- Induction of Th17 cells by segmented filamentous bacteria in the murine intestine
- (2015) Adam M. Farkas et al. JOURNAL OF IMMUNOLOGICAL METHODS
- Addressing the experimental variability associated with the microbiota
- (2015) G Eberl Mucosal Immunology
- Vertically transmitted faecal IgA levels determine extra-chromosomal phenotypic variation
- (2015) Clara Moon et al. NATURE
- Host microbiota constantly control maturation and function of microglia in the CNS
- (2015) Daniel Erny et al. NATURE NEUROSCIENCE
- Gut microbiota facilitates dietary heme-induced epithelial hyperproliferation by opening the mucus barrier in colon
- (2015) Noortje Ijssennagger et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gut DNA viromes of Malawian twins discordant for severe acute malnutrition
- (2015) Alejandro Reyes et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Diversion of HIV-1 vaccine-induced immunity by gp41-microbiota cross-reactive antibodies
- (2015) W. B. Williams et al. SCIENCE
- Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota
- (2015) M. Vetizou et al. SCIENCE
- Cytomegalovirus infection enhances the immune response to influenza
- (2015) David Furman et al. Science Translational Medicine
- Early infancy microbial and metabolic alterations affect risk of childhood asthma
- (2015) Marie-Claire Arrieta et al. Science Translational Medicine
- Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites
- (2015) Alison N. Thorburn et al. Nature Communications
- Transkingdom Control of Microbiota Diurnal Oscillations Promotes Metabolic Homeostasis
- (2014) Christoph A. Thaiss et al. CELL
- Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences
- (2014) Laura M. Cox et al. CELL
- The Virome in Mammalian Physiology and Disease
- (2014) Herbert W. Virgin CELL
- Gut Microbiota Promote Hematopoiesis to Control Bacterial Infection
- (2014) Arya Khosravi et al. Cell Host & Microbe
- Bacterial Lipopolysaccharide Binding Enhances Virion Stability and Promotes Environmental Fitness of an Enteric Virus
- (2014) Christopher M. Robinson et al. Cell Host & Microbe
- The Treatment-Naive Microbiome in New-Onset Crohn’s Disease
- (2014) Dirk Gevers et al. Cell Host & Microbe
- Kingdom-Agnostic Metagenomics and the Importance of Complete Characterization of Enteric Microbial Communities
- (2014) Jason M. Norman et al. GASTROENTEROLOGY
- TLR5-Mediated Sensing of Gut Microbiota Is Necessary for Antibody Responses to Seasonal Influenza Vaccination
- (2014) Jason Z. Oh et al. IMMUNITY
- Norovirus Triggered Microbiota-driven Mucosal Inflammation in Interleukin 10-deficient Mice
- (2014) Marijana Basic et al. INFLAMMATORY BOWEL DISEASES
- Pediatric Crohn disease patients exhibit specific ileal transcriptome and microbiome signature
- (2014) Yael Haberman et al. JOURNAL OF CLINICAL INVESTIGATION
- Consumption of Acidic Water Alters the Gut Microbiome and Decreases the Risk of Diabetes in NOD Mice
- (2014) Kyle J. Wolf et al. JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY
- Standardised animal models of host microbial mutualism
- (2014) A J Macpherson et al. Mucosal Immunology
- Biogeography and individuality shape function in the human skin metagenome
- (2014) Julia Oh et al. NATURE
- Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile
- (2014) Charlie G. Buffie et al. NATURE
- Time to cast a larger net
- (2014) Matthew L Wheeler et al. NATURE IMMUNOLOGY
- Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis
- (2014) Aurélien Trompette et al. NATURE MEDICINE
- Commensal microbes and interferon- determine persistence of enteric murine norovirus infection
- (2014) M. T. Baldridge et al. SCIENCE
- Prevention and cure of rotavirus infection via TLR5/NLRC4-mediated production of IL-22 and IL-18
- (2014) B. Zhang et al. SCIENCE
- Helminth infection reactivates latent -herpesvirus via cytokine competition at a viral promoter
- (2014) T. A. Reese et al. SCIENCE
- Virus-helminth coinfection reveals a microbiota-independent mechanism of immunomodulation
- (2014) L. C. Osborne et al. SCIENCE
- Common Genetic Variants Modulate Pathogen-Sensing Responses in Human Dendritic Cells
- (2014) M. N. Lee et al. SCIENCE
- A Compositional Look at the Human Gastrointestinal Microbiome and Immune Activation Parameters in HIV Infected Subjects
- (2014) Ece A. Mutlu et al. PLoS Pathogens
- Bacteroides dorei dominates gut microbiome prior to autoimmunity in Finnish children at high risk for type 1 diabetes
- (2014) Austin G. Davis-Richardson et al. Frontiers in Microbiology
- Microbial shifts in the aging mouse gut
- (2014) Morgan GI Langille et al. Microbiome
- Homeostasis in Intestinal Epithelium Is Orchestrated by the Circadian Clock and Microbiota Cues Transduced by TLRs
- (2013) Atish Mukherji et al. CELL
- Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders
- (2013) Elaine Y. Hsiao et al. CELL
- Temporal Response of the Human Virome to Immunosuppression and Antiviral Therapy
- (2013) Iwijn De Vlaminck et al. CELL
- Gender Bias in Autoimmunity Is Influenced by Microbiota
- (2013) Leonid Yurkovetskiy et al. IMMUNITY
- Biphasic assembly of the murine intestinal microbiota during early development
- (2013) Ida Gisela Pantoja-Feliciano et al. ISME Journal
- Stochastic changes over time and not founder effects drive cage effects in microbial community assembly in a mouse model
- (2013) Jonathan McCafferty et al. ISME Journal
- IL-22 Deficiency Alters Colonic Microbiota To Be Transmissible and Colitogenic
- (2013) L. A. Zenewicz et al. JOURNAL OF IMMUNOLOGY
- Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation
- (2013) Nicholas Arpaia et al. NATURE
- Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
- (2013) Koji Atarashi et al. NATURE
- Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents
- (2013) Christian Hoffmann et al. PLoS One
- Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut
- (2013) A. Reyes et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis
- (2013) P. M. Smith et al. SCIENCE
- Gut Microbiomes of Malawian Twin Pairs Discordant for Kwashiorkor
- (2013) M. I. Smith et al. SCIENCE
- Sex Differences in the Gut Microbiome Drive Hormone-Dependent Regulation of Autoimmunity
- (2013) J. G. M. Markle et al. SCIENCE
- Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice
- (2013) V. K. Ridaura et al. SCIENCE
- Importance of prophages to evolution and virulence of bacterial pathogens
- (2013) Louis-Charles Fortier et al. Virulence
- Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
- (2013) Jose U Scher et al. eLife
- Helminth-host immunological interactions: prevention and control of immune-mediated diseases
- (2012) David E. Elliott et al. Annals of the New York Academy of Sciences
- Pathogenic Simian Immunodeficiency Virus Infection Is Associated with Expansion of the Enteric Virome
- (2012) Scott A. Handley et al. CELL
- Chronic Bystander Infections and Immunity to Unrelated Antigens
- (2012) Erietta Stelekati et al. Cell Host & Microbe
- Enteric Protozoa in the Developed World: a Public Health Perspective
- (2012) S. M. Fletcher et al. CLINICAL MICROBIOLOGY REVIEWS
- Viral interactions with the host and microbiota in the intestine
- (2012) Clara Moon et al. CURRENT OPINION IN IMMUNOLOGY
- Context matters — the complex interplay between resistome genotypes and resistance phenotypes
- (2012) Gautam Dantas et al. CURRENT OPINION IN MICROBIOLOGY
- Does the gut microbiota have a role in type 1 diabetes? Early evidence from humans and animal models of the disease
- (2012) M. A. Atkinson et al. DIABETOLOGIA
- Commensal Bacteria Calibrate the Activation Threshold of Innate Antiviral Immunity
- (2012) Michael C. Abt et al. IMMUNITY
- Host genetic and environmental effects on mouse intestinal microbiota
- (2012) James H Campbell et al. ISME Journal
- The gut microbiota regulates bone mass in mice
- (2012) Klara Sjögren et al. JOURNAL OF BONE AND MINERAL RESEARCH
- Regulation of intestinal inflammation by microbiota following allogeneic bone marrow transplantation
- (2012) Robert R. Jenq et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Unstressing intemperate models: how cold stress undermines mouse modeling
- (2012) Christopher L. Karp JOURNAL OF EXPERIMENTAL MEDICINE
- Tissue factor and PAR1 promote microbiota-induced intestinal vascular remodelling
- (2012) Christoph Reinhardt et al. NATURE
- Metagenomic microbial community profiling using unique clade-specific marker genes
- (2012) Nicola Segata et al. NATURE METHODS
- Heat or Insulation: Behavioral Titration of Mouse Preference for Warmth or Access to a Nest
- (2012) Brianna N. Gaskill et al. PLoS One
- Microbial Exposure During Early Life Has Persistent Effects on Natural Killer T Cell Function
- (2012) T. Olszak et al. SCIENCE
- Interactions Between the Microbiota and the Immune System
- (2012) L. V. Hooper et al. SCIENCE
- Metagenomics and Personalized Medicine
- (2011) Herbert W. Virgin et al. CELL
- NLRP6 Inflammasome Regulates Colonic Microbial Ecology and Risk for Colitis
- (2011) Eran Elinav et al. CELL
- Commensal Bacteroides Species Induce Colitis in Host-Genotype-Specific Fashion in a Mouse Model of Inflammatory Bowel Disease
- (2011) Seth M. Bloom et al. Cell Host & Microbe
- Low-Abundance Biofilm Species Orchestrates Inflammatory Periodontal Disease through the Commensal Microbiota and Complement
- (2011) George Hajishengallis et al. Cell Host & Microbe
- Prevalence of viral, bacterial and parasitological diseases in rats and mice used in research environments in Australasia over a 5-y period
- (2011) Elizabeth F. McInnes et al. LAB ANIMAL
- Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease
- (2011) Zeneng Wang et al. NATURE
- Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice
- (2011) A. L. Goodman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbiota regulates immune defense against respiratory tract influenza A virus infection
- (2011) T. Ichinohe et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Leishmania RNA Virus Controls the Severity of Mucocutaneous Leishmaniasis
- (2011) A. Ives et al. SCIENCE
- Successful Transmission of a Retrovirus Depends on the Commensal Microbiota
- (2011) M. Kane et al. SCIENCE
- Intestinal Microbiota Promote Enteric Virus Replication and Systemic Pathogenesis
- (2011) S. K. Kuss et al. SCIENCE
- The phage-host arms race: Shaping the evolution of microbes
- (2010) Adi Stern et al. BIOESSAYS
- Virus-Plus-Susceptibility Gene Interaction Determines Crohn's Disease Gene Atg16L1 Phenotypes in Intestine
- (2010) Ken Cadwell et al. CELL
- Redefining Chronic Viral Infection
- (2009) Herbert W. Virgin et al. CELL
- Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces
- (2008) Pauline D Scanlan et al. ISME Journal
- Bacterial, archaeal, and eukaryal diversity in the intestines of Korean people
- (2008) Young-Do Nam et al. JOURNAL OF MICROBIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started