标题
Chromosome level genome assembly of oriental armyworm Mythimna separata
作者
关键词
-
出版物
Scientific Data
Volume 10, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2023-09-08
DOI
10.1038/s41597-023-02506-3
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Chromosome‐level genomes of two armyworms, Mythimna separata and Mythimna loreyi, provide insights into the biosynthesis and reception of sex pheromones
- (2023) Hanbo Zhao et al. Molecular Ecology Resources
- The oriental armyworm genome yields insights into the long-distance migration of noctuid moths
- (2022) Dandan Tong et al. Cell Reports
- Reference Genome Sequences of the Oriental Armyworm, Mythimna separata (Lepidoptera: Noctuidae)
- (2022) Kakeru Yokoi et al. Insects
- Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm
- (2021) Haoyu Cheng et al. NATURE METHODS
- Unveiling sugarcane defense response to Mythimna separata herbivory by a combination of transcriptome and metabolic analyses
- (2021) Ya‐ru Wang et al. PEST MANAGEMENT SCIENCE
- Chitin deacetylase: A potential target for Mythimna separata (Walker) control
- (2020) Yan Liu et al. ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY
- Identifying and removing haplotypic duplication in primary genome assemblies
- (2020) Dengfeng Guan et al. BIOINFORMATICS
- RepeatModeler2 for automated genomic discovery of transposable element families
- (2020) Jullien M. Flynn et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- CAFE 5 models variation in evolutionary rates among gene families
- (2020) Fábio K Mendes et al. BIOINFORMATICS
- Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification
- (2019) Pavel Neumann et al. Mobile DNA
- MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
- (2019) Guanliang Meng et al. NUCLEIC ACIDS RESEARCH
- Noise-cancelling repeat finder: uncovering tandem repeats in error-prone long-read sequencing data
- (2019) Robert S Harris et al. BIOINFORMATICS
- PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools
- (2018) Huaiyu Mi et al. NUCLEIC ACIDS RESEARCH
- GeSeq – versatile and accurate annotation of organelle genomes
- (2017) Michael Tillich et al. NUCLEIC ACIDS RESEARCH
- LTR_retriever: A Highly Accurate and Sensitive Program for Identification of Long Terminal Repeat Retrotransposons
- (2017) Shujun Ou et al. PLANT PHYSIOLOGY
- Using intron position conservation for homology-based gene prediction
- (2016) Jens Keilwagen et al. NUCLEIC ACIDS RESEARCH
- The BIG Data Center: from deposition to integration to translation
- (2016) NUCLEIC ACIDS RESEARCH
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
- (2015) Felipe A. Simão et al. BIOINFORMATICS
- Repbase Update, a database of repetitive elements in eukaryotic genomes
- (2015) Weidong Bao et al. Mobile DNA
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- PASTEC: An Automatic Transposable Element Classification Tool
- (2014) Claire Hoede et al. PLoS One
- HTQC: a fast quality control toolkit for Illumina sequencing data
- (2013) Xi Yang et al. BMC BIOINFORMATICS
- Mechanisms of macroevolution: polyphagous plasticity in butterfly larvae revealed by RNA-Seq
- (2013) Maria de la Paz Celorio-Mancera et al. MOLECULAR ECOLOGY
- Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions
- (2013) Joshua N Burton et al. NATURE BIOTECHNOLOGY
- MITOS: Improved de novo metazoan mitochondrial genome annotation
- (2012) Matthias Bernt et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Dfam: a database of repetitive DNA based on profile hidden Markov models
- (2012) Travis J. Wheeler et al. NUCLEIC ACIDS RESEARCH
- MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
- (2012) Y. Wang et al. NUCLEIC ACIDS RESEARCH
- Regulation of Migration inMythimna separata(Walker) in China: A Review Integrating Environmental, Physiological, Hormonal, Genetic, and Molecular Factors
- (2011) Xingfu Jiang et al. ENVIRONMENTAL ENTOMOLOGY
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Using native and syntenically mapped cDNA alignments to improve de novo gene finding
- (2008) Mario Stanke et al. BIOINFORMATICS
- Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
- (2008) Brian J Haas et al. GENOME BIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started