Deep sequencing leads to the identification of eukaryotic translation initiation factor 5A as a key element in Rsv1 -mediated lethal systemic hypersensitive response to Soybean mosaic virus infection in soybean

Oxidative stress and antioxidative responses in plant–virus interactions

(2016) José Antonio Hernández et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

The altered photosynthetic machinery during compatible virus infection

(2016) Yinzi Li et al.   Current Opinion in Virology

Evolutionary Patterns and Coevolutionary Consequences ofMIRNAGenes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean

(2015) Meixia Zhao et al.   PLANT CELL

Pathogenesis of Soybean mosaic virus in soybean carrying Rsv1 gene is associated with miRNA and siRNA pathways, and breakdown of AGO1 homeostasis

(2015) Hui Chen et al.   VIROLOGY

Prediction and characterization of Tomato leaf curl New Delhi virus (ToLCNDV) responsive novel microRNAs in Solanum lycopersicum

(2015) Bhubaneswar Pradhan et al.   VIRUS RESEARCH

Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA

(2015) Jianguo Wu et al.   eLife

Soybean miR172c Targets the Repressive AP2 Transcription Factor NNC1 to ActivateENOD40Expression and Regulate Nodule Initiation

(2014) Youning Wang et al.   PLANT CELL

Roles of small RNAs in soybean defense againstPhytophthora sojaeinfection

(2014) James Wong et al.   PLANT JOURNAL

Identification and Characterization of Wilt and Salt Stress-Responsive MicroRNAs in Chickpea through High-Throughput Sequencing

(2014) Deshika Kohli et al.   PLoS One

Crop immunity against viruses: outcomes and future challenges

(2014) Valérie Nicaise   Frontiers in Plant Science

Genome-wide identification of soybean microRNAs and their targets reveals their organ-specificity and responses to phosphate starvation

(2013) Feng Xu et al.   BMC GENOMICS

Rapid construction of parallel analysis of RNA end (PARE) libraries for Illumina sequencing

(2013) Jixian Zhai et al.   METHODS

Quantitative transcriptional changes associated with chlorosis severity in mosaic leaves of tobacco plants infected withCucumber mosaic virus

(2013) Tomofumi Mochizuki et al.   MOLECULAR PLANT PATHOLOGY

The Immunity Regulator BAK1 Contributes to Resistance Against Diverse RNA Viruses

(2013) Camilla Julie Kørner et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Argonaute proteins: functional insights and emerging roles

(2013) Gunter Meister   NATURE REVIEWS GENETICS

Plant Immune Responses Against Viruses: How Does a Virus Cause Disease?

(2013) Kranthi K. Mandadi et al.   PLANT CELL

Detection and evolutionary analysis of soybean miRNAs responsive to soybean mosaic virus

(2013) Xianchao Yin et al.   PLANTA

Using RNA-Seq to Profile Soybean Seed Development from Fertilization to Maturity

(2013) Sarah I. Jones et al.   PLoS One

Pivoting the Plant Immune System from Dissection to Deployment

(2013) J. L. Dangl et al.   SCIENCE

Identification of soybean seed developmental stage-specific and tissue-specific miRNA targets by degradome sequencing

(2012) Md Shamimuzzaman et al.   BMC GENOMICS

The Requirement of Multiple Defense Genes in Soybean Rsv1–Mediated Extreme Resistance to Soybean mosaic virus

(2012) Chunquan Zhang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

PAREsnip: a tool for rapid genome-wide discovery of small RNA/target interactions evidenced through degradome sequencing

(2012) Leighton Folkes et al.   NUCLEIC ACIDS RESEARCH

The Apoplastic Oxidative Burst Peroxidase in Arabidopsis Is a Major Component of Pattern-Triggered Immunity

(2012) A. Daudi et al.   PLANT CELL

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

Global alteration of microRNAs and transposon-derived small RNAs in cotton (Gossypium hirsutum) during Cotton leafroll dwarf polerovirus (CLRDV) infection

(2012) Elisson Romanel et al.   PLANT MOLECULAR BIOLOGY

Genome-Wide Profiling of miRNAs and Other Small Non-Coding RNAs in the Verticillium dahliae–Inoculated Cotton Roots

(2012) Zujun Yin et al.   PLoS One

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs

(2011) J. Zhai et al.   GENES & DEVELOPMENT

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

An effective virus-based gene silencing method for functional genomics studies in common bean

(2011) Claudia Díaz-Camino et al.   Plant Methods

Simultaneous Mutations in Multi-Viral Proteins Are Required for Soybean mosaic virus to Gain Virulence on Soybean Genotypes Carrying Different R Genes

(2011) R. V. Chowda-Reddy et al.   PLoS One

Independently Evolved Virulence Effectors Converge onto Hubs in a Plant Immune System Network

(2011) M. S. Mukhtar et al.   SCIENCE

Viral Infection Induces Expression of Novel Phased MicroRNAs from Conserved Cellular MicroRNA Precursors

(2011) Peng Du et al.   PLoS Pathogens

RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

(2010) Andrew J Severin et al.   BMC PLANT BIOLOGY

Plant virus-mediated induction of miR168 is associated with repression of ARGONAUTE1 accumulation

(2010) Éva Várallyay et al.   EMBO JOURNAL

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Virus infection elevates transcriptional activity of miR164a promoter in plants

(2009) Ariel A Bazzini et al.   BMC PLANT BIOLOGY

Strain-Specific Cylindrical Inclusion Protein ofSoybean mosaic virusElicits Extreme Resistance and a Lethal Systemic Hypersensitive Response in Two Resistant Soybean Cultivars

(2009) Jang-Kyun Seo et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Transcriptional Changes and Oxidative Stress Associated with the Synergistic Interaction BetweenPotato virus XandPotato virus Yand Their Relationship with Symptom Expression

(2009) Alberto García-Marcos et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome

(2009) Marcelo A German et al.   Nature Protocols

Innate Immunity in Plants: An Arms Race Between Pattern Recognition Receptors in Plants and Effectors in Microbial Pathogens

(2009) T. Boller et al.   SCIENCE

A novel and universal method for microRNA RT-qPCR data normalization

(2009) Pieter Mestdagh et al.   GENOME BIOLOGY

Association of the transcriptional response of soybean plants with soybean mosaic virus systemic infection

(2008) M. Babu et al.   JOURNAL OF GENERAL VIROLOGY

Kunitz Trypsin Inhibitor: An Antagonist of Cell Death Triggered by Phytopathogens and Fumonisin B1 in Arabidopsis

(2008) Jing Li et al.   Molecular Plant

Elevated Ozone Alters Soybean-Virus Interaction

(2008) Damla D. Bilgin et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends

(2008) Marcelo A German et al.   NATURE BIOTECHNOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of input RNA

(2008) Pieter Mestdagh et al.   NUCLEIC ACIDS RESEARCH

Plant virus infection-induced persistent host gene downregulation in systemically infected leaves

(2008) Zoltn Havelda et al.   PLANT JOURNAL

Eukaryotic Translation Initiation Factor 5A Is Involved in Pathogen-Induced Cell Death and Development of Disease Symptoms in Arabidopsis

(2008) M. T. Hopkins et al.   PLANT PHYSIOLOGY

Recombination analysis of Soybean mosaic virus sequences reveals evidence of RNA recombination between distinct pathotypes

(2008) Alla G Gagarinova et al.   Virology Journal

Identification and molecular characterization of two naturally occurring Soybean mosaic virus isolates that are closely related but differ in their ability to overcome Rsv4 resistance

(2008) Alla G. Gagarinova et al.   VIRUS RESEARCH