SARS-CoV-2 viral persistence in lung alveolar macrophages is controlled by IFN-γ and NK cells

A novel automated protocol for ice crystal segmentation analysis using Cellpose and Fiji

(2023) Joshua Saad et al.   CRYOBIOLOGY

SARS-CoV-2 Spike protein induces TLR4-mediated long-term cognitive dysfunction recapitulating post-COVID-19 syndrome in mice

(2023) Fabricia L. Fontes-Dantas et al.   Cell Reports

NK cell dysfunction in patients with COVID-19

(2022) Jiacheng Bi   Cellular & Molecular Immunology

The impact of the lung environment on macrophage development, activation and function: diversity in the face of adversity

(2022) Calum C. Bain et al.   Mucosal Immunology

SignalP 6.0 predicts all five types of signal peptides using protein language models

(2022) Felix Teufel et al.   NATURE BIOTECHNOLOGY

SARS-CoV-2 Nsp13 encodes for an HLA-E-stabilizing peptide that abrogates inhibition of NKG2A-expressing NK cells

(2022) Quirin Hammer et al.   Cell Reports

Persistence of SARS CoV-2 S1 Protein in CD16+ Monocytes in Post-Acute Sequelae of COVID-19 (PASC) up to 15 Months Post-Infection

(2022) Bruce K. Patterson et al.   Frontiers in Immunology

Inflammasome activation in infected macrophages drives COVID-19 pathology

(2022) Esen Sefik et al.   NATURE

SARS-CoV-2 pathogenesis

(2022) Mart M. Lamers et al.   NATURE REVIEWS MICROBIOLOGY

Potent human broadly SARS-CoV-2–neutralizing IgA and IgG antibodies effective against Omicron BA.1 and BA.2

(2022) Cyril Planchais et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Tunneling nanotubes provide a route for SARS-CoV-2 spreading

(2022) Anna Pepe et al.   Science Advances

Surface translocation of ACE2 and TMPRSS2 upon TLR4/7/8 activation is required for SARS-CoV-2 infection in circulating monocytes

(2022) Yi Yao et al.   Cell Discovery

SARS-CoV-2 infection and persistence in the human body and brain at autopsy

(2022) Sydney R. Stein et al.   NATURE

SARS-CoV-2 accessory proteins ORF7a and ORF3a use distinct mechanisms to down-regulate MHC-I surface expression

(2022) Najla Arshad et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SARS-CoV-2 escapes direct NK cell killing through Nsp1-mediated downregulation of ligands for NKG2D

(2022) Madeline J. Lee et al.   Cell Reports

SARS-CoV-2 Omicron BA.1 and BA.2 are attenuated in rhesus macaques as compared to Delta

(2022) Neeltje van Doremalen et al.   Science Advances

COVID-19 and the human innate immune system

(2021) Joachim L. Schultze et al.   CELL

SIV-induced terminally differentiated adaptive NK cells in lymph nodes associated with enhanced MHC-E restricted activity

(2021) Nicolas Huot et al.   Nature Communications

TLR2 senses the SARS-CoV-2 envelope protein to produce inflammatory cytokines

(2021) Min Zheng et al.   NATURE IMMUNOLOGY

Modulation of MHC-E transport by viral decoy ligands is required for RhCMV/SIV vaccine efficacy

(2021) Marieke C. Verweij et al.   SCIENCE

S100A8/A9 in COVID-19 pathogenesis: Impact on clinical outcomes

(2021) Leah Mellett et al.   CYTOKINE & GROWTH FACTOR REVIEWS

Comparative pathogenesis of COVID-19, MERS, and SARS in a nonhuman primate model

(2020) Barry Rockx et al.   SCIENCE

Detailed and atypical HLA‐E peptide binding motifs revealed by a novel peptide exchange binding assay

(2020) Lucy C. Walters et al.   EUROPEAN JOURNAL OF IMMUNOLOGY

Hydroxychloroquine use against SARS-CoV-2 infection in non-human primates

(2020) Pauline Maisonnasse et al.   NATURE

The Lung Macrophage in SARS-CoV-2 Infection: A Friend or a Foe?

(2020) Zaid Abassi et al.   Frontiers in Immunology

Improvements in Flow Cytometry‐Based Cytotoxicity Assay

(2020) Xiaolong Wu et al.   CYTOMETRY PART A

Friends or foes? The knowns and unknowns of natural killer cell biology in COVID-19 and other coronaviruses in July 2020

(2020) Cordelia Manickam et al.   PLoS Pathogens

SARS-CoV-2 Spike 1 Protein Controls Natural Killer Cell Activation via the HLA-E/NKG2A Pathway

(2020) Daria Bortolotti et al.   Cells

Natural killer cell immunotypes related to COVID-19 disease severity

(2020) Christopher Maucourant et al.   Science Immunology

The interplay between inflammatory pathways and COVID-19: A critical review on pathogenesis and therapeutic options

(2020) Shalki Choudhary et al.   MICROBIAL PATHOGENESIS

Transcription Factor IRF8 Orchestrates the Adaptive Natural Killer Cell Response

(2018) Nicholas M. Adams et al.   IMMUNITY

The versatility of the CD1 lipid antigen presentation pathway

(2018) Andrew Chancellor et al.   IMMUNOLOGY

Threshold-based segmentation of fluorescent and chromogenic images of microglia, astrocytes and oligodendrocytes in FIJI

(2018) Sinead Healy et al.   JOURNAL OF NEUROSCIENCE METHODS

Tracking KLRC2 (NKG2C)+ memory-like NK cells in SIV+ and rhCMV+ rhesus macaques

(2018) Daniel R. Ram et al.   PLoS Pathogens

Monocytes and Macrophages as Viral Targets and Reservoirs

(2018) Ekaterina Nikitina et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Natural killer cells migrate into and control simian immunodeficiency virus replication in lymph node follicles in African green monkeys

(2017) Nicolas Huot et al.   NATURE MEDICINE

Control of Phagocytosis by Microbial Pathogens

(2017) Eileen Uribe-Querol et al.   Frontiers in Immunology

HLA-E: Presentation of a Broader Peptide Repertoire Impacts the Cellular Immune Response—Implications on HSCT Outcome

(2015) Thomas Kraemer et al.   Stem Cells International

Alternative Antigen Processing for MHC Class I: Multiple Roads Lead to Rome

(2015) Cláudia C. Oliveira et al.   Frontiers in Immunology

NK Cells and Their Ability to Modulate T Cells during Virus Infections

(2014) Kevin D. Cook et al.   CRITICAL REVIEWS IN IMMUNOLOGY

Autophagy mediates transporter associated with antigen processing-independent presentation of viral epitopes through MHC class I pathway

(2012) S.-K. Tey et al.   BLOOD

Alternative peptide repertoire of HLA-E reveals a binding motif that is strikingly similar to HLA-A2

(2012) Margit H. Lampen et al.   MOLECULAR IMMUNOLOGY

Signal peptidase I: Cleaving the way to mature proteins

(2011) Sarah M. Auclair et al.   PROTEIN SCIENCE

Peptides with dual binding specificity for HLA-A2 and HLA-E are encoded by alternatively spliced isoforms of the antioxidant enzyme peroxiredoxin 5

(2009) M. Sensi et al.   INTERNATIONAL IMMUNOLOGY

Features of TAP-independent MHC class I ligands revealed by quantitative mass spectrometry

(2008) Andreas O. Weinzierl et al.   EUROPEAN JOURNAL OF IMMUNOLOGY