Investigating genomic and phenotypic parallelism between piscivorous and planktivorous lake trout (Salvelinus namaycush) ecotypes by means of RADseq and morphometrics analyses
出版年份 2016 全文链接
标题
Investigating genomic and phenotypic parallelism between piscivorous and planktivorous lake trout (Salvelinus namaycush) ecotypes by means of RADseq and morphometrics analyses
作者
关键词
-
出版物
MOLECULAR ECOLOGY
Volume 25, Issue 19, Pages 4773-4792
出版商
Wiley
发表日期
2016-08-06
DOI
10.1111/mec.13795
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Shape plasticity in response to water velocity in the freshwater blennySalaria fluviatilis
- (2016) M. Laporte et al. JOURNAL OF FISH BIOLOGY
- Controlling false discoveries in genome scans for selection
- (2016) Olivier François et al. MOLECULAR ECOLOGY
- Local Adaptation by Alleles of Small Effect
- (2015) Sam Yeaman AMERICAN NATURALIST
- Reliable Detection of Loci Responsible for Local Adaptation: Inference of a Null Model through Trimming the Distribution of FST
- (2015) Michael C. Whitlock et al. AMERICAN NATURALIST
- If Arctic charrSalvelinus alpinusis ‘the most diverse vertebrate’, what is the lake charrSalvelinus namaycush?
- (2015) Andrew Michael Muir et al. FISH AND FISHERIES
- Generation of a neutralFSTbaseline for testing local adaptation on gill raker number within and between European whitefish ecotypes in the Baltic Sea basin
- (2015) M. Y. Ozerov et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- RAD sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels
- (2015) M. Laporte et al. MOLECULAR ECOLOGY
- Genetic rescue of small inbred populations: meta-analysis reveals large and consistent benefits of gene flow
- (2015) Richard Frankham MOLECULAR ECOLOGY
- The relative power of genome scans to detect local adaptation depends on sampling design and statistical method
- (2015) Katie E. Lotterhos et al. MOLECULAR ECOLOGY
- RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus)
- (2015) Laura Benestan et al. MOLECULAR ECOLOGY
- Genetic rescue to the rescue
- (2015) Andrew R. Whiteley et al. TRENDS IN ECOLOGY & EVOLUTION
- LEA: AnRpackage for landscape and ecological association studies
- (2015) Eric Frichot et al. Methods in Ecology and Evolution
- RAD-QTL Mapping Reveals Both Genome-Level Parallelism and Different Genetic Architecture Underlying the Evolution of Body Shape in Lake Whitefish ( Coregonus clupeaformis ) Species Pairs
- (2015) Martin Laporte et al. G3-Genes Genomes Genetics
- Evidence for genetic distinction among sympatric ecotypes of Arctic char (Salvelinus alpinus) in south-western Alaskan lakes
- (2014) Shannan L. May-McNally et al. ECOLOGY OF FRESHWATER FISH
- Loss of genetic integrity in wild lake trout populations following stocking: insights from an exhaustive study of 72 lakes from Québec, Canada
- (2014) Eliane Valiquette et al. Evolutionary Applications
- RNA-seq Reveals Transcriptomic Shock Involving Transposable Elements Reactivation in Hybrids of Young Lake Whitefish Species
- (2014) Anne-Marie Dion-Côté et al. MOLECULAR BIOLOGY AND EVOLUTION
- Recent novel approaches for population genomics data analysis
- (2014) Kimberly R. Andrews et al. MOLECULAR ECOLOGY
- Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests
- (2014) Katie E. Lotterhos et al. MOLECULAR ECOLOGY
- Cntnap4 differentially contributes to GABAergic and dopaminergic synaptic transmission
- (2014) T. Karayannis et al. NATURE
- Atrial natriuretic peptide: An old hormone or a new cytokine?
- (2014) Paolo De Vito PEPTIDES
- De novo SOX11 mutations cause Coffin–Siris syndrome
- (2014) Yoshinori Tsurusaki et al. Nature Communications
- Parallel evolution of Nicaraguan crater lake cichlid fishes via non-parallel routes
- (2014) Kathryn R. Elmer et al. Nature Communications
- The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
- (2014) Camille Berthelot et al. Nature Communications
- Crater lake cichlids individually specialize along the benthic-limnetic axis
- (2014) Henrik Kusche et al. Ecology and Evolution
- THE GENETIC ARCHITECTURE OF REPRODUCTIVE ISOLATION DURING SPECIATION-WITH-GENE-FLOW IN LAKE WHITEFISH SPECIES PAIRS ASSESSED BY RAD SEQUENCING
- (2013) Pierre-Alexandre Gagnaire et al. EVOLUTION
- Robust Identification of Local Adaptation from Allele Frequencies
- (2013) T. Gunther et al. GENETICS
- Adaptation and constraint in a stickleback radiation
- (2013) K. L. Voje et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models
- (2013) Eric Frichot et al. MOLECULAR BIOLOGY AND EVOLUTION
- Parallel and nonparallel genome-wide divergence among replicate population pairs of freshwater and anadromous Atlantic salmon
- (2013) Charles Perrier et al. MOLECULAR ECOLOGY
- Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping
- (2013) Bruce E. Deagle et al. MOLECULAR ECOLOGY
- Genotyping-by-sequencing in ecological and conservation genomics
- (2013) Shawn R. Narum et al. MOLECULAR ECOLOGY
- Ecological genomics of local adaptation
- (2013) Outi Savolainen et al. NATURE REVIEWS GENETICS
- Sympatric Polymorphism in Lake Trout: The Coexistence of Multiple Shallow-Water Morphotypes in Great Bear Lake
- (2013) Louise Chavarie et al. TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY
- Ecological speciation in postglacial European whitefish: rapid adaptive radiations into the littoral, pelagic, and profundal lake habitats
- (2013) Kim Praebel et al. Ecology and Evolution
- Stocking impacts the expression of candidate genes and physiological condition in introgressed brook charr (Salvelinus fontinalis) populations
- (2012) Fabien C. Lamaze et al. Evolutionary Applications
- Parallelism in the oxygen transport system of the lake whitefish: the role of physiological divergence in ecological speciation
- (2012) MELISSA L. EVANS et al. MOLECULAR ECOLOGY
- Dynamics of introgressive hybridization assessed by SNP population genomics of coding genes in stocked brook charr (Salvelinus fontinalis)
- (2012) FABIEN C. LAMAZE et al. MOLECULAR ECOLOGY
- The genetic differentiation at quantitative trait loci under local adaptation
- (2012) VALÉRIE LE CORRE et al. MOLECULAR ECOLOGY
- Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach
- (2012) Jesse A. Poland et al. PLoS One
- Phosphorylation of Kif26b Promotes Its Polyubiquitination and Subsequent Proteasomal Degradation during Kidney Development
- (2012) Takeshi Terabayashi et al. PLoS One
- The probability of genetic parallelism and convergence in natural populations
- (2012) G. L. Conte et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Lake charr Salvelinus namaycush spawning behaviour: new field observations and a review of current knowledge
- (2012) A. M. Muir et al. REVIEWS IN FISH BIOLOGY AND FISHERIES
- A Perspective on Perspectives: Methods to Reduce Variation in Shape Analysis of Digital Images
- (2012) A. M. Muir et al. TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY
- PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs
- (2011) H. E. L. Lischer et al. BIOINFORMATICS
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- Reevaluating and Broadening the Definition of Genetic Rescue
- (2011) Philip W. Hedrick et al. CONSERVATION BIOLOGY
- A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks
- (2011) Felicity C. Jones et al. CURRENT BIOLOGY
- Genetic differentiation between the blue and the yellow phenotypes of walleye (Sander vitreus): An example of parallel evolution
- (2011) Martin Laporte et al. ECOSCIENCE
- GLOBAL ANALYSIS OF GENES INVOLVED IN FRESHWATER ADAPTATION IN THREESPINE STICKLEBACKS (GASTEROSTEUS ACULEATUS)
- (2011) Jacquelin DeFaveri et al. EVOLUTION
- CONVERGENCE, ADAPTATION, AND CONSTRAINT
- (2011) Jonathan B. Losos EVOLUTION
- Genome-wide association studies establish that human intelligence is highly heritable and polygenic
- (2011) G Davies et al. MOLECULAR PSYCHIATRY
- Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes
- (2011) P. A. Hohenlohe et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences
- (2011) Julian M. Catchen et al. G3-Genes Genomes Genetics
- Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and Genome Analyzer systems
- (2011) André E Minoche et al. GENOME BIOLOGY
- Is hatchery stocking a help or harm?
- (2010) Hitoshi Araki et al. AQUACULTURE
- Classification of threespine stickleback along the benthic-limnetic axis
- (2010) JAMES J. WILLACKER et al. BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY
- Genetic structure of freshwater Atlantic salmon (Salmo salar L.) populations from the lakes Onega and Ladoga of northwest Russia and implications for conservation
- (2010) Mikhail Yu. Ozerov et al. CONSERVATION GENETICS
- The role of gill raker number variability in adaptive radiation of coregonid fish
- (2010) Kimmo K. Kahilainen et al. EVOLUTIONARY ECOLOGY
- Using Environmental Correlations to Identify Loci Underlying Local Adaptation
- (2010) G. Coop et al. GENETICS
- Population genetic inference from genomic sequence variation
- (2010) J. E. Pool et al. GENOME RESEARCH
- An Integrative Model of Evolutionary Covariance: A Symposium on Body Shape in Fishes
- (2010) J. A. Walker INTEGRATIVE AND COMPARATIVE BIOLOGY
- Phenotype-environment correlations in a putative whitefish adaptive radiation
- (2010) Chris Harrod et al. JOURNAL OF ANIMAL ECOLOGY
- The transcriptomics of sympatric dwarf and normal lake whitefish (Coregonus clupeaformis spp., Salmonidae) divergence as revealed by next-generation sequencing
- (2010) JULIE JEUKENS et al. MOLECULAR ECOLOGY
- Loss of genetic integrity correlates with stocking intensity in brook charr (Salvelinus fontinalis)
- (2010) A. D. MARIE et al. MOLECULAR ECOLOGY
- MorphoJ: an integrated software package for geometric morphometrics
- (2010) CHRISTIAN PETER KLINGENBERG Molecular Ecology Resources
- Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
- (2010) Susanna Atwell et al. NATURE
- Genomics and the future of conservation genetics
- (2010) Fred W. Allendorf et al. NATURE REVIEWS GENETICS
- Kif26b, a kinesin family gene, regulates adhesion of the embryonic kidney mesenchyme
- (2010) Y. Uchiyama et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ontogenetic niche shifts and resource partitioning of lake trout morphotypes
- (2009) Mara S. Zimmerman et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Fast model-based estimation of ancestry in unrelated individuals
- (2009) D. H. Alexander et al. GENOME RESEARCH
- How well do evolutionary trees describe genetic relationships among populations?
- (2009) S T Kalinowski HEREDITY
- ALX4 dysfunction disrupts craniofacial and epidermal development
- (2009) Hulya Kayserili et al. HUMAN MOLECULAR GENETICS
- Augmented potassium current is a shared phenotype for two genetic defects associated with familial atrial fibrillation
- (2009) Robert L. Abraham et al. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY
- Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity
- (2009) NADIA AUBIN-HORTH et al. MOLECULAR ECOLOGY
- The genetics of quantitative traits: challenges and prospects
- (2009) Trudy F. C. Mackay et al. NATURE REVIEWS GENETICS
- Variable Introgression from Supplemental Stocking in Southern Ontario Populations of Lake Trout
- (2009) Michael A. Halbisen et al. TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY
- Morphological variability among three geographically distinct Arctic charr (Salvelinus alpinusL.) populations reared in a common hatchery environment
- (2008) M. Janhunen et al. ECOLOGY OF FRESHWATER FISH
- Charr truth: sympatric differentiation in Salvelinus species
- (2008) David L. G. Noakes ENVIRONMENTAL BIOLOGY OF FISHES
- A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective
- (2008) M. Foll et al. GENETICS
- The transcriptomics of life-history trade-offs in whitefish species pairs (Coregonussp.)
- (2008) J. ST-CYR et al. MOLECULAR ECOLOGY
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started