Cellulases and beyond: the first 70 years of the enzyme producer Trichoderma reesei

I-SceI enzyme mediated integration (SEMI) for fast and efficient gene targeting in Trichoderma reesei

(2016) Jean Paul Ouedraogo et al.   JOURNAL OF BIOTECHNOLOGY

Extracellular electron transfer systems fuel cellulose oxidative degradation

(2016) D. Kracher et al.   SCIENCE

Novel Strategies for Genomic Manipulation of Trichoderma reesei with the Purpose of Strain Engineering

(2015) Christian Derntl et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

I-SceI-mediated double-strand DNA breaks stimulate efficient gene targeting in the industrial fungus Trichoderma reesei

(2015) Jean Paul Ouedraogo et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Applications of hydrophobins: current state and perspectives

(2015) Han A. B. Wösten et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Synergistic action of recombinant accessory hemicellulolytic and pectinolytic enzymes to Trichoderma reesei cellulase on rice straw degradation

(2015) Thanaporn Laothanachareon et al.   BIORESOURCE TECHNOLOGY

Swollenin from Trichoderma reesei exhibits hydrolytic activity against cellulosic substrates with features of both endoglucanases and cellobiohydrolases

(2015) Martina Andberg et al.   BIORESOURCE TECHNOLOGY

Recombinant CBM-fusion technology — Applications overview

(2015) Carla Oliveira et al.   BIOTECHNOLOGY ADVANCES

Trichoderma reesei meiosis generates segmentally aneuploid progeny with higher xylanase-producing capability

(2015) Yu-Chien Chuang et al.   Biotechnology for Biofuels

Restoration of female fertility in Trichoderma reesei QM6a provides the basis for inbreeding in this industrial cellulase producing fungus

(2015) Rita Linke et al.   Biotechnology for Biofuels

Characterization of a copper responsive promoter and its mediated overexpression of the xylanase regulator 1 results in an induction-independent production of cellulases in Trichoderma reesei

(2015) Xinxing Lv et al.   Biotechnology for Biofuels

Designer synthetic media for studying microbial-catalyzed biofuel production

(2015) Xiaoyu Tang et al.   Biotechnology for Biofuels

Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype

(2015) Alexander Lichius et al.   BMC GENOMICS

Progress and challenges in the engineering of non-cellulolytic microorganisms for consolidated bioprocessing

(2015) Riaan den Haan et al.   CURRENT OPINION IN BIOTECHNOLOGY

Competitive inhibition of cellobiohydrolase I by manno-oligosaccharides

(2015) Donglin Xin et al.   ENZYME AND MICROBIAL TECHNOLOGY

Enabling Low Cost Biopharmaceuticals: A Systematic Approach to Delete Proteases from a Well-Known Protein Production Host Trichoderma reesei

(2015) Christopher P. Landowski et al.   PLoS One

Structure and boosting activity of a starch-degrading lytic polysaccharide monooxygenase

(2015) Leila Lo Leggio et al.   Nature Communications

Identification of a Classical Mutant in the Industrial Host Aspergillus niger by Systems Genetics: LaeA Is Required for Citric Acid Production and Regulates the Formation of Some Secondary Metabolites

(2015) Jing Niu et al.   G3-Genes Genomes Genetics

Synergistic and Dose-Controlled Regulation of Cellulase Gene Expression in Penicillium oxalicum

(2015) Zhonghai Li et al.   PLoS Genetics

One Juliet and four Romeos: VeA and its methyltransferases

(2015) Özlem Sarikaya-Bayram et al.   Frontiers in Microbiology

Efficient genome editing in filamentous fungus Trichoderma reesei using the CRISPR/Cas9 system

(2015) Rui Liu et al.   Cell Discovery

A CRISPR-Cas9 System for Genetic Engineering of Filamentous Fungi

(2015) Christina S. Nødvig et al.   PLoS One

Enzymatic cellulose oxidation is linked to lignin by long-range electron transfer

(2015) Bjørge Westereng et al.   Scientific Reports

Cerato-platanins: a fungal protein family with intriguing properties and application potential

(2014) Romana Gaderer et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Challenges and advances in the heterologous expression of cellulolytic enzymes: a review

(2014) Camilla Lambertz et al.   Biotechnology for Biofuels

Efficient yeast cell-surface display of exo- and endo-cellulase using the SED1 anchoring region and its original promoter

(2014) Kentaro Inokuma et al.   Biotechnology for Biofuels

A truncated form of the Carbon catabolite repressor 1 increases cellulase production in Trichoderma reesei

(2014) Thiago M Mello-de-Sousa et al.   Biotechnology for Biofuels

Screening of candidate regulators for cellulase and hemicellulase production in Trichoderma reesei and identification of a factor essential for cellulase production

(2014) Mari Häkkinen et al.   Biotechnology for Biofuels

Fungal secretomes enhance sugar beet pulp hydrolysis

(2014) Daniel Kracher et al.   Biotechnology Journal

Comparison of intracellular and secretion-based strategies for production of human α-galactosidase A in the filamentous fungus Trichoderma reesei

(2014) Wesley Smith et al.   BMC BIOTECHNOLOGY

Illumina identification of RsrA, a conserved C2H2 transcription factor coordinating the NapA mediated oxidative stress signaling pathway in Aspergillus

(2014) Jin Woo Bok et al.   BMC GENOMICS

New enzyme insights drive advances in commercial ethanol production

(2014) Paul V Harris et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Consolidated bioprocessing of lignocellulose by a microbial consortium

(2014) Simone Brethauer et al.   Energy & Environmental Science

Trichoderma reeseiXYN VI - a novel appendage-dependent eukaryotic glucuronoxylan hydrolase

(2014) Peter Biely et al.   FEBS Journal

Morphology and enzyme production of Trichoderma reesei Rut C-30 are affected by the physical and structural characteristics of cellulosic substrates

(2014) Ausra Peciulyte et al.   FUNGAL GENETICS AND BIOLOGY

Cellulose Surface Degradation by a Lytic Polysaccharide Monooxygenase and Its Effect on Cellulase Hydrolytic Efficiency

(2014) Manuel Eibinger et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A novel platform for heterologous gene expression in Trichoderma reesei (Teleomorph Hypocrea jecorina)

(2014) Mikael Jørgensen et al.   Microbial Cell Factories

Development of a GIN11/FRT-based multiple-gene integration technique affording inhibitor-tolerant, hemicellulolytic, xylose-utilizing abilities to industrial Saccharomyces cerevisiaestrains for ethanol production from undetoxified lignocellulosic hemicelluloses

(2014) Tomohisa Hasunuma et al.   Microbial Cell Factories

CRISPR-Cas systems for editing, regulating and targeting genomes

(2014) Jeffry D Sander et al.   NATURE BIOTECHNOLOGY

Enhancement of Synthetic Trichoderma-Based Enzyme Mixtures for Biomass Conversion with an Alternative Family 5 Glycosyl Hydrolase from Sporotrichum thermophile

(2014) Zhuoliang Ye et al.   PLoS One

The VELVET A Orthologue VEL1 of Trichoderma reesei Regulates Fungal Development and Is Essential for Cellulase Gene Expression

(2014) Razieh Karimi Aghcheh et al.   PLoS One

Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation

(2014) J. W. Agger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HAM-5 Functions As a MAP Kinase Scaffold during Cell Fusion in Neurospora crassa

(2014) Wilfried Jonkers et al.   PLoS Genetics

Fungal Communication Requires the MAK-2 Pathway Elements STE-20 and RAS-2, the NRC-1 Adapter STE-50 and the MAP Kinase Scaffold HAM-5

(2014) Anne Dettmann et al.   PLoS Genetics

Erythritol production on wheat straw using Trichoderma reesei

(2014) Birgit Jovanović et al.   AMB Express

Plant Cell Wall Deconstruction by Ascomycete Fungi

(2013) N. Louise Glass et al.   Annual Review of Microbiology

Trichoderma reesei CE16 acetyl esterase and its role in enzymatic degradation of acetylated hemicellulose

(2013) Peter Biely et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Swollenin aids in the amorphogenesis step during the enzymatic hydrolysis of pretreated biomass

(2013) Keith Gourlay et al.   BIORESOURCE TECHNOLOGY

Endowing non-cellulolytic microorganisms with cellulolytic activity aiming for consolidated bioprocessing

(2013) Ryosuke Yamada et al.   BIOTECHNOLOGY ADVANCES

Enhancement of fermentable sugar yields by α-xylosidase supplementation of commercial cellulases

(2013) Dina Jabbour et al.   Biotechnology for Biofuels

The synergistic action of accessory enzymes enhances the hydrolytic potential of a “cellulase mixture” but is highly substrate specific

(2013) Jinguang Hu et al.   Biotechnology for Biofuels

Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes

(2013) Anthony Levasseur et al.   Biotechnology for Biofuels

Mutation of the Xylanase regulator 1 causes a glucose blind hydrolase expressing phenotype in industrially used Trichoderma strains

(2013) Christian Derntl et al.   Biotechnology for Biofuels

Comparative analysis of the Trichoderma reesei transcriptome during growth on the cellulase inducing substrates wheat straw and lactose

(2013) Robert Bischof et al.   Biotechnology for Biofuels

Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger

(2013) Laure Ries et al.   BMC GENOMICS

Trichoderma reesei Histone Acetyltransferase Gcn5 Regulates Fungal Growth, Conidiation, and Cellulase Gene Expression

(2013) Qi Xin et al.   CURRENT MICROBIOLOGY

Fusion of cellulose binding domain from Trichoderma reesei CBHI to Cryptococcus sp. S-2 cellulase enhances its binding affinity and its cellulolytic activity to insoluble cellulosic substrates

(2013) Jantaporn Thongekkaew et al.   ENZYME AND MICROBIAL TECHNOLOGY

Ethanol production from high cellulose concentration by the basidiomycete fungus Flammulina velutipes

(2013) Tomoko Maehara et al.   Fungal Biology

Ethanol fermentation from xylose by metabolically engineered strains of Kluyveromyces marxianus

(2013) Tetsuya Goshima et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Synergetic effect of yeast cell-surface expression of cellulase and expansin-like protein on direct ethanol production from cellulose

(2013) Yuki Nakatani et al.   Microbial Cell Factories

Discovery and characterization of a new family of lytic polysaccharide monooxygenases

(2013) Glyn R Hemsworth et al.   Nature Chemical Biology

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Fusing a Carbohydrate-Binding Module into the Aspergillus usamii β-Mannanase to Improve Its Thermostability and Cellulose-Binding Capacity by In Silico Design

(2013) Cun-Duo Tang et al.   PLoS One

The Crystal Structure of the Core Domain of a Cellulose Induced Protein (Cip1) from Hypocrea jecorina, at 1.5 Å Resolution

(2013) Frida Jacobson et al.   PLoS One

Design and characterization of synthetic fungal-bacterial consortia for direct production of isobutanol from cellulosic biomass

(2013) Jeremy J. Minty et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Xylitol Production by Genetically Engineered Trichoderma reesei Strains Using Barley Straw as Feedstock

(2012) Mehdi Dashtban et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Overexpression of native PSE1 and SOD1 in Saccharomyces cerevisiae improved heterologous cellulase secretion

(2012) Heinrich Kroukamp et al.   APPLIED ENERGY

Developing symbiotic consortia for lignocellulosic biofuel production

(2012) Trevor R. Zuroff et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Simultaneous improvement of saccharification and ethanol production from crystalline cellulose by alleviation of irreversible adsorption of cellulase with a cell surface-engineered yeast strain

(2012) Yuki Matano et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Xylo-oligosaccharides are competitive inhibitors of cellobiohydrolase I from Thermoascus aurantiacus

(2012) Junhua Zhang et al.   BIORESOURCE TECHNOLOGY

Fusarium verticillioides secretome as a source of auxiliary enzymes to enhance saccharification of wheat straw

(2012) Holy Ravalason et al.   BIORESOURCE TECHNOLOGY

A versatile toolkit for high throughput functional genomics with Trichoderma reesei

(2012) Andre Schuster et al.   Biotechnology for Biofuels

Promoting pellet growth of Trichoderma reesei Rut C30 by surfactants for easy separation and enhanced cellulase production

(2012) Nicholas V. Callow et al.   ENZYME AND MICROBIAL TECHNOLOGY

Xylanase XYN IV fromTrichoderma reeseishowing exo- and endo-xylanase activity

(2012) Maija Tenkanen et al.   FEBS Journal

A new Zn(II)2Cys6-type transcription factor BglR regulates β-glucosidase expression in Trichoderma reesei

(2012) Mikiko Nitta et al.   FUNGAL GENETICS AND BIOLOGY

Overexpression of bacterial ethylene-forming enzyme gene in Trichoderma reesei enhanced the production of ethylene

(2012) Xi Chen et al.   International Journal of Biological Sciences

Systems biological approaches towards understanding cellulase production by Trichoderma reesei

(2012) Christian P. Kubicek   JOURNAL OF BIOTECHNOLOGY

Laboratory evolution of copper tolerant yeast strains

(2012) Giusy Adamo et al.   Microbial Cell Factories

The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei

(2012) Bernhard Seiboth et al.   MOLECULAR MICROBIOLOGY

Earliest evidence for cheese making in the sixth millennium bc in northern Europe

(2012) Mélanie Salque et al.   NATURE

Cellulose affinity purification of fusion proteins tagged with fungal family 1 cellulose-binding domain

(2012) Naohisa Sugimoto et al.   PROTEIN EXPRESSION AND PURIFICATION

Potential of fungi as category I Consolidated BioProcessing organisms for cellulosic ethanol production

(2012) Antonella Amore et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

Whole-Genome Sequencing of Sordaria macrospora Mutants Identifies Developmental Genes

(2012) Minou Nowrousian et al.   G3-Genes Genomes Genetics

Growth and ethanol fermentation ability on hexose and pentose sugars and glucose effect under various conditions in thermotolerant yeast Kluyveromyces marxianus

(2011) Nadchanok Rodrussamee et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

High level secretion of cellobiohydrolases by Saccharomyces cerevisiae

(2011) Marja Ilmén et al.   Biotechnology for Biofuels

Direct ethanol production from cellulosic materials using a diploid strain of Saccharomyces cerevisiae with optimized cellulase expression

(2011) Ryosuke Yamada et al.   Biotechnology for Biofuels

How recombinant swollenin from Kluyveromyces lactis affects cellulosic substrates and accelerates their hydrolysis

(2011) Gernot Jäger et al.   Biotechnology for Biofuels

Bulk Segregant Analysis Followed by High-Throughput Sequencing Reveals the Neurospora Cell Cycle Gene, ndc-1 , To Be Allelic with the Gene for Ornithine Decarboxylase, spe-1

(2011) Kyle R. Pomraning et al.   EUKARYOTIC CELL

Synthesis of an antiviral drug precursor from chitin using a saprophyte as a whole-cell catalyst

(2011) Matthias G Steiger et al.   Microbial Cell Factories

Trichoderma reesei RUT-C30 - thirty years of strain improvement

(2011) R. Peterson et al.   MICROBIOLOGY-SGM

Structure of the catalytic domain of glucuronoyl esterase Cip2 from Hypocrea jecorina

(2011) Phani Raj Pokkuluri et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Traffic Jams Reduce Hydrolytic Efficiency of Cellulase on Cellulose Surface

(2011) K. Igarashi et al.   SCIENCE

Transformation System forHypocrea jecorina(Trichoderma reesei) That Favors Homologous Integration and Employs Reusable Bidirectionally Selectable Markers

(2010) Matthias G. Steiger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Stimulation of Lignocellulosic Biomass Hydrolysis by Proteins of Glycoside Hydrolase Family 61: Structure and Function of a Large, Enigmatic Family

(2010) Paul V. Harris et al.   BIOCHEMISTRY

Xylooligomers are strong inhibitors of cellulose hydrolysis by enzymes

(2010) Qing Qing et al.   BIORESOURCE TECHNOLOGY

Synthetic enzyme mixtures for biomass deconstruction: Production and optimization of a core set

(2010) Goutami Banerjee et al.   BIOTECHNOLOGY AND BIOENGINEERING

Rapid optimization of enzyme mixtures for deconstruction of diverse pretreatment/biomass feedstock combinations

(2010) Goutami Banerjee et al.   Biotechnology for Biofuels

Exploring laccase-like multicopper oxidase genes from the ascomycete Trichoderma reesei: a functional, phylogenetic and evolutionary study

(2010) Anthony Levasseur et al.   BMC BIOCHEMISTRY

Differential Regulation of the Cellulase Transcription Factors XYR1, ACE2, and ACE1 in Trichoderma reesei Strains Producing High and Low Levels of Cellulase

(2010) Thomas Portnoy et al.   EUKARYOTIC CELL

An Oxidative Enzyme Boosting the Enzymatic Conversion of Recalcitrant Polysaccharides

(2010) Gustav Vaaje-Kolstad et al.   SCIENCE

Metabolic engineering strategies for the improvement of cellulase production by Hypocrea jecorina

(2009) Christian P Kubicek et al.   Biotechnology for Biofuels

Mary Elizabeth Hickox Mandels, 90, bioenergy leader

(2009) Fred Allen et al.   Biotechnology for Biofuels

We march backwards into the future

(2009) Thomas Jeffries et al.   CURRENT OPINION IN BIOTECHNOLOGY

Perspectives and new directions for the production of bioethanol using consolidated bioprocessing of lignocellulose

(2009) Qi Xu et al.   CURRENT OPINION IN BIOTECHNOLOGY

Molecular Regulation of Arabinan and l-Arabinose Metabolism inHypocrea jecorina(Trichoderma reesei)

(2009) Eda Akel et al.   EUKARYOTIC CELL

Sexual development in the industrial workhorse Trichoderma reesei

(2009) V. Seidl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing

(2009) S. Le Crom et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Expression of ethylene-forming enzyme (EFE) of Pseudomonas syringae pv. glycinea in Trichoderma viride

(2008) Li Tao et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The Hypocrea jecorina (Trichoderma reesei) hypercellulolytic mutant RUT C30 lacks a 85 kb (29 gene-encoding) region of the wild-type genome

(2008) Verena Seidl et al.   BMC GENOMICS

Gene targeting in a nonhomologous end joining deficient Hypocrea jecorina

(2008) Zhang Guangtao et al.   JOURNAL OF BIOTECHNOLOGY

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

(2008) Diego Martinez et al.   NATURE BIOTECHNOLOGY