Cultivation potential of Vanilla crop wild relatives in two contrasting land use systems

Support trees in vanilla agroforests of Madagascar: diversity, composition and origin

(2022) J. Osewold et al.   AGROFORESTRY SYSTEMS

Land-use trajectories for sustainable land system transformations: Identifying leverage points in a global biodiversity hotspot

(2022) Dominic Andreas Martin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Win-win opportunities combining high yields with high multi-taxa biodiversity in tropical agroforestry

(2022) Annemarie Wurz et al.   Nature Communications

The beautiful hills: half a century of vanilla (Vanilla planifolia Jacks. ex Andrews) breeding in Madagascar

(2021) Michel Grisoni et al.   GENETIC RESOURCES AND CROP EVOLUTION

Quantification of the aromatic potential of ripe fruit of Vanilla planifolia (Orchidaceae) and several of its closely and distantly related species and hybrids

(2021) Araceli Pérez-Silva et al.   EUROPEAN FOOD RESEARCH AND TECHNOLOGY

The Effects of Tree and Stand Traits on the Specific Leaf Area in Managed Scots Pine Forests of Different Ages

(2021) Agnieszka Błasiak et al.   Forests

Tree species mixing affects soil microbial functioning indirectly via root and litter traits and soil parameters in European forests

(2021) Lauren M. Gillespie et al.   FUNCTIONAL ECOLOGY

Novel Plant-Associated Acidobacteria Promotes Growth of Common Floating Aquatic Plants, Duckweeds

(2021) Yasuko Yoneda et al.   Microorganisms

Improvement of Soil Microbial Diversity through Sustainable Agricultural Practices and Its Evaluation by -Omics Approaches: A Perspective for the Environment, Food Quality and Human Safety

(2021) Marta Bertola et al.   Microorganisms

Microbial Diversity in Cultivated and Feral Vanilla Vanilla planifolia Orchids Affected by Stem and Rot Disease

(2021) Ireri A. Carbajal-Valenzuela et al.   MICROBIAL ECOLOGY

Genotyping-By-Sequencing diversity analysis of international Vanilla collections uncovers hidden diversity and enables plant improvement

(2021) Alan Chambers et al.   PLANT SCIENCE

Spatial Patterns and Interspecific Associations During Natural Regeneration in Three Types of Secondary Forest in the Central Part of the Greater Khingan Mountains, Heilongjiang Province, China

(2020) Lingyu Zhang et al.   Forests

Vanilla distribution modeling for conservation and sustainable cultivation in a joint land sparing/sharing concept

(2020) Charlotte Watteyn et al.   Ecosphere

Land‐use history determines ecosystem services and conservation value in tropical agroforestry

(2020) Dominic Andreas Martin et al.   Conservation Letters

Improved normalization of species count data in ecology by scaling with ranked subsampling (SRS): application to microbial communities

(2020) Lukas Beule et al.   PeerJ

Shade-Tree Rehabilitation in Vanilla Agroforests is Yield Neutral and May Translate into Landscape-Scale Canopy Cover Gains

(2020) Dominic Andreas Martin et al.   ECOSYSTEMS

Harnessing Knowledge from Maize and Rice Domestication for New Crop Breeding

(2020) Qiuyue Chen et al.   Molecular Plant

Scalable Visualization Methods for Modern Generalized Additive Models

(2019) Matteo Fasiolo et al.   JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS

Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement

(2019) Aamir W. Khan et al.   TRENDS IN PLANT SCIENCE

TRY plant trait database – enhanced coverage and open access

(2019) Jens Kattge et al.   GLOBAL CHANGE BIOLOGY

Shade trees have higher impact on soil nutrient availability and food web in organic than conventional coffee agroforestry

(2018) Marie Sauvadet et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bio-fertilizer application induces soil suppressiveness against Fusarium wilt disease by reshaping the soil microbiome

(2017) Wu Xiong et al.   SOIL BIOLOGY & BIOCHEMISTRY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Microbial diversity drives multifunctionality in terrestrial ecosystems

(2016) Manuel Delgado-Baquerizo et al.   Nature Communications

The Ecology of Acidobacteria: Moving beyond Genes and Genomes

(2016) Anna M. Kielak et al.   Frontiers in Microbiology

The global spectrum of plant form and function

(2015) Sandra Díaz et al.   NATURE

Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota

(2015) Weili Xiong et al.   PROTEOMICS

Molecular identification and pathogenic variation of Fusarium species isolated from Vanilla planifolia in Papantla Mexico

(2015) Jacel Adame-García et al.   Botanical Sciences

Molecular identification and pathogenic variation of Fusarium species isolated from Vanilla planifolia in Papantla Mexico

(2015) Jacel Adame-García et al.   Botanical Sciences

Differential Responses of Vanilla Accessions to Root Rot and Colonization by Fusarium oxysporum f. sp. radicis-vanillae

(2015) Sayuj Koyyappurath et al.   Frontiers in Plant Science

Utilization of wild relatives of wheat, barley, maize and oat in developing abiotic and biotic stress tolerant new varieties

(2015) Aysen Yumurtaci   Emirates Journal of Food and Agriculture

FactoMineR: AnRPackage for Multivariate Analysis

(2015) Sébastien Lê et al.   Journal of Statistical Software

A prioritized crop wild relative inventory to help underpin global food security

(2013) Holly Vincent et al.   BIOLOGICAL CONSERVATION

Evolution of crop species: genetics of domestication and diversification

(2013) Rachel S. Meyer et al.   NATURE REVIEWS GENETICS

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

ANOVA-Like Differential Expression (ALDEx) Analysis for Mixed Population RNA-Seq

(2013) Andrew D. Fernandes et al.   PLoS One

Manipulating the soil microbiome to increase soil health and plant fertility

(2012) Jacqueline M. Chaparro et al.   BIOLOGY AND FERTILITY OF SOILS

Genetic variation and risks of introgression in the wildCoffea arabicagene pool in south-western Ethiopian montane rainforests

(2012) Raf Aerts et al.   Evolutionary Applications

Exploration of Vanilla pompona from the Peruvian Amazon as a potential source of vanilla essence: Quantification of phenolics by HPLC-DAD

(2012) Helena Maruenda et al.   FOOD CHEMISTRY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Practical variable selection for generalized additive models

(2011) Giampiero Marra et al.   COMPUTATIONAL STATISTICS & DATA ANALYSIS

Semi-forest coffee cultivation and the conservation of Ethiopian Afromontane rainforest fragments

(2011) Raf Aerts et al.   FOREST ECOLOGY AND MANAGEMENT

How fundamental plant functional trait relationships scale-up to trade-offs and synergies in ecosystem services

(2011) Sandra Lavorel et al.   JOURNAL OF ECOLOGY

Fusariumspecies associated with vanilla stem rot in Indonesia

(2010) A. G. Pinaria et al.   AUSTRALASIAN PLANT PATHOLOGY

Genetic signals of origin, spread, and introgression in a large sample of maize landraces

(2010) J. van Heerwaarden et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic Changes in Different Developmental Stages of Vanilla planifolia Pods

(2009) Tony Lionel Palama et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS