Implementing Link Prediction in Protein Networks via Feature Fusion Models Based on Graph Neural Networks

Fusing Higher and Lower-order Biological Information for Drug Repositioning via Graph Representation Learning

(2023) Bo-Wei Zhao et al.   IEEE Transactions on Emerging Topics in Computing

Efficient link prediction in the protein–protein interaction network using topological information in a generative adversarial network machine learning model

(2022) Olivér M. Balogh et al.   BMC BIOINFORMATICS

Link prediction for existing links in dynamic networks based on the attraction force

(2022) Kuo Chi et al.   CHAOS SOLITONS & FRACTALS

Deep Link-Prediction Based on the Local Structure of Bipartite Networks

(2022) Hehe Lv et al.   Entropy

Incorporating higher order network structures to improve miRNA–disease association prediction based on functional modularity

(2022) Yizhou He et al.   BRIEFINGS IN BIOINFORMATICS

PPISB: A Novel Network-Based Algorithm of Predicting Protein-Protein Interactions With Mixed Membership Stochastic Blockmodel

(2022) Xiaojuan Wang et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Hierarchical Attention Link Prediction Neural Network

(2021) Zhitao Wang et al.   KNOWLEDGE-BASED SYSTEMS

A novel link prediction algorithm for protein-protein interaction networks by attributed graph embedding

(2021) Elahe Nasiri et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Perturbation of the normalized Laplacian matrix for the prediction of missing links in real networks

(2021) Roya Aliakbarisani et al.   IEEE Transactions on Network Science and Engineering

Nonnegative matrix factorization for link prediction in directed complex networks using PageRank and asymmetric link clustering information

(2020) Guangfu Chen et al.   EXPERT SYSTEMS WITH APPLICATIONS

Graph embedding-based novel protein interaction prediction via higher-order graph convolutional network

(2020) Ze Xiao et al.   PLoS One

SkipGNN: predicting molecular interactions with skip-graph networks

(2020) Kexin Huang et al.   Scientific Reports

A Deep Learning Framework for Gene Ontology Annotations With Sequence- and Network-Based Information

(2020) Fuhao Zhang et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

An Ensemble Approach to Link Prediction

(2017) Liang Duan et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

Link prediction in multi-relational networks based on relational similarity

(2017) Caiyan Dai et al.   INFORMATION SCIENCES