Synthetic analysis of chromatin tracing and live-cell imaging indicates pervasive spatial coupling between genes
出版年份 2023 全文链接
标题
Synthetic analysis of chromatin tracing and live-cell imaging indicates pervasive spatial coupling between genes
作者
关键词
-
出版物
eLife
Volume 12, Issue -, Pages -
出版商
eLife Sciences Publications, Ltd
发表日期
2023-02-14
DOI
10.7554/elife.81861
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Transcriptional coupling of distant regulatory genes in living embryos
- (2022) Michal Levo et al. NATURE
- Dynamics of CTCF- and cohesin-mediated chromatin looping revealed by live-cell imaging
- (2022) Michele Gabriele et al. SCIENCE
- Enhancer–promoter interactions and transcription are largely maintained upon acute loss of CTCF, cohesin, WAPL or YY1
- (2022) Tsung-Han S. Hsieh et al. NATURE GENETICS
- Dynamic imaging of nascent RNA reveals general principles of transcription dynamics and stochastic splice site selection
- (2021) Yihan Wan et al. CELL
- The Stochastic Genome and Its Role in Gene Expression
- (2021) Christopher H. Bohrer et al. Cold Spring Harbor Perspectives in Biology
- A pairwise distance distribution correction (DDC) algorithm to eliminate blinking-caused artifacts in SMLM
- (2021) Christopher H. Bohrer et al. NATURE METHODS
- The transcription factor activity gradient (TAG) model: contemplating a contact-independent mechanism for enhancer–promoter communication
- (2021) Jonathan P. Karr et al. GENES & DEVELOPMENT
- Complex small-world regulatory networks emerge from the 3D organisation of the human genome
- (2021) C. A. Brackley et al. Nature Communications
- Chromatin Viscoelasticity Measured by Local Dynamic Analysis
- (2020) Anat Vivante et al. BIOPHYSICAL JOURNAL
- Resolving the 3D Landscape of Transcription-Linked Mammalian Chromatin Folding
- (2020) Tsung-Han S. Hsieh et al. MOLECULAR CELL
- The Self-Organizing Genome: Principles of Genome Architecture and Function
- (2020) Tom Misteli CELL
- Genome-Scale Imaging of the 3D Organization and Transcriptional Activity of Chromatin
- (2020) Jun-Han Su et al. CELL
- RNA-Mediated Feedback Control of Transcriptional Condensates
- (2020) Jonathan E. Henninger et al. CELL
- Pairing of segmentation clock genes drives robust pattern formation
- (2020) Oriana Q. H. Zinani et al. NATURE
- Chromatin Tracing: Imaging 3D Genome and Nucleome
- (2020) Mengwei Hu et al. TRENDS IN CELL BIOLOGY
- Single nucleosome imaging reveals loose genome chromatin networks via active RNA polymerase II
- (2019) Ryosuke Nagashima et al. JOURNAL OF CELL BIOLOGY
- Large distances separate coregulated genes in living Drosophila embryos
- (2019) Tyler Heist et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Molecular basis and biological function of variability in spatial genome organization
- (2019) Elizabeth H. Finn et al. SCIENCE
- Chromosome-wide co-fluctuation of stochastic gene expression in mammalian cells
- (2019) Mengyi Sun et al. PLoS Genetics
- Local Chromatin Motion and Transcription
- (2019) Michael Babokhov et al. JOURNAL OF MOLECULAR BIOLOGY
- Synchronization of stochastic expressions drives the clustering of functionally related genes
- (2019) Haiqing Xu et al. Science Advances
- Visualization of Transvection in Living Drosophila Embryos
- (2018) Bomyi Lim et al. MOLECULAR CELL
- Transcription-coupled changes in nuclear mobility of mammalian cis-regulatory elements
- (2018) Bo Gu et al. SCIENCE
- Mediator and RNA polymerase II clusters associate in transcription-dependent condensates
- (2018) Won-Ki Cho et al. SCIENCE
- Dynamic interplay between enhancer–promoter topology and gene activity
- (2018) Hongtao Chen et al. NATURE GENETICS
- Intrinsic Dynamics of a Human Gene Reveal the Basis of Expression Heterogeneity
- (2018) Joseph Rodriguez et al. CELL
- Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells
- (2018) Bogdan Bintu et al. SCIENCE
- Dynamic Organization of Chromatin Domains Revealed by Super-Resolution Live-Cell Imaging
- (2017) Tadasu Nozaki et al. MOLECULAR CELL
- ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells
- (2017) Horng D. Ou et al. SCIENCE
- Dynamics of active Rouse chains
- (2017) Dino Osmanović et al. Soft Matter
- Enhancer Control of Transcriptional Bursting
- (2016) Takashi Fukaya et al. CELL
- Enhancer Sharing Promotes Neighborhoods of Transcriptional Regulation Across Eukaryotes
- (2016) Porfirio Quintero-Cadena et al. G3-Genes Genomes Genetics
- RNA Polymerase II cluster dynamics predict mRNA output in living cells
- (2016) Won-Ki Cho et al. eLife
- Super-resolution imaging of fluorescently labeled, endogenous RNA Polymerase II in living cells with CRISPR/Cas9-mediated gene editing
- (2016) Won-Ki Cho et al. Scientific Reports
- Architectural and Functional Commonalities between Enhancers and Promoters
- (2015) Tae-Kyung Kim et al. CELL
- Why the activity of a gene depends on its neighbors
- (2015) Alexander Feuerborn et al. TRENDS IN GENETICS
- Loss of lamin A function increases chromatin dynamics in the nuclear interior
- (2015) I. Bronshtein et al. Nature Communications
- Analysis of Single Locus Trajectories for Extracting In Vivo Chromatin Tethering Interactions
- (2015) Assaf Amitai et al. PLoS Computational Biology
- Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells
- (2014) Q. Deng et al. SCIENCE
- Dynamic Imaging of Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System
- (2013) Baohui Chen et al. CELL
- Chromosomal Contact Permits Transcription between Coregulated Genes
- (2013) Stephanie Fanucchi et al. CELL
- Single-chromosome transcriptional profiling reveals chromosomal gene expression regulation
- (2013) Marshall J Levesque et al. NATURE METHODS
- Real-Time Dynamics of RNA Polymerase II Clustering in Live Human Cells
- (2013) I. I. Cisse et al. SCIENCE
- A Test of the Coordinated Expression Hypothesis for the Origin and Maintenance of the GAL Cluster in Yeast
- (2011) Gregory I. Lang et al. PLoS One
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now