ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells

Super-resolution imaging reveals distinct chromatin folding for different epigenetic states

(2016) Alistair N. Boettiger et al.   NATURE

Click-EM for imaging metabolically tagged nonprotein biomolecules

(2016) John T Ngo et al.   Nature Chemical Biology

Visualizing the molecular sociology at the HeLa cell nuclear periphery

(2016) J. Mahamid et al.   SCIENCE

Viral and Cellular Genomes Activate Distinct DNA Damage Responses

(2015) Govind A. Shah et al.   CELL

Chromatin Fibers Are Formed by Heterogeneous Groups of Nucleosomes In Vivo

(2015) Maria Aurelia Ricci et al.   CELL

High mobility group (HMG) proteins: Modulators of chromatin structure and DNA repair in mammalian cells

(2015) Raymond Reeves   DNA REPAIR

Visualizing viral protein structures in cells using genetic probes for correlated light and electron microscopy

(2015) Horng D. Ou et al.   METHODS

Structural Mechanisms of Nucleosome Recognition by Linker Histones

(2015) Bing-Rui Zhou et al.   MOLECULAR CELL

Chromatin as dynamic 10-nm fibers

(2014) Kazuhiro Maeshima et al.   CHROMOSOMA

Every amino acid matters: essential contributions of histone variants to mammalian development and disease

(2014) Ian Maze et al.   NATURE REVIEWS GENETICS

Chromatin fiber polymorphism triggered by variations of DNA linker lengths

(2014) R. Collepardo-Guevara et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cryo-EM Study of the Chromatin Fiber Reveals a Double Helix Twisted by Tetranucleosomal Units

(2014) F. Song et al.   SCIENCE

Three-dimensional super-resolution microscopy of the inactive X chromosome territory reveals a collapse of its active nuclear compartment harboring distinct Xist RNA foci

(2014) Daniel Smeets et al.   Epigenetics & Chromatin

Genome Architecture: Domain Organization of Interphase Chromosomes

(2013) Wendy A. Bickmore et al.   CELL

Connectomic reconstruction of the inner plexiform layer in the mouse retina

(2013) Moritz Helmstaedter et al.   NATURE

Contribution of histone N-terminal tails to the structure and stability of nucleosomes

(2013) Wakana Iwasaki et al.   FEBS Open Bio

A Structural Basis for the Assembly and Functions of a Viral Polymer that Inactivates Multiple Tumor Suppressors

(2012) Horng D. Ou et al.   CELL

Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure

(2012) Yoshinori Nishino et al.   EMBO JOURNAL

Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres

(2012) Eden Fussner et al.   EMBO REPORTS

TxBR montage reconstruction for large field electron tomography

(2012) Sébastien Phan et al.   JOURNAL OF STRUCTURAL BIOLOGY

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Chromatin replication and epigenome maintenance

(2012) Constance Alabert et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The conundrum of gel formation by molecular nanofibers, wormlike micelles, and filamentous proteins: gelation without cross-links?

(2012) Srinivasa R. Raghavan et al.   Soft Matter

Toward Convergence of Experimental Studies and Theoretical Modeling of the Chromatin Fiber

(2011) Tamar Schlick et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Chromatin folding - from biology to polymer models and back

(2011) M. Tark-Dame et al.   JOURNAL OF CELL SCIENCE

Super-resolution fluorescence imaging of chromosomal DNA

(2011) Patrick J.M. Zessin et al.   JOURNAL OF STRUCTURAL BIOLOGY

Evidence for short-range helical order in the 30-nm chromatin fibers of erythrocyte nuclei

(2011) M. P. Scheffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Genetically Encoded Tag for Correlated Light and Electron Microscopy of Intact Cells, Tissues, and Organisms

(2011) Xiaokun Shu et al.   PLOS BIOLOGY

Nanotribology Results Show that DNA Forms a Mechanically Resistant 2D Network in Metaphase Chromatin Plates

(2010) Isaac Gállego et al.   BIOPHYSICAL JOURNAL

Nucleosome structural studies

(2010) Song Tan et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Evolutionary tabu search strategies for the simultaneous registration of multiple atomic structures in cryo-EM reconstructions

(2010) Mirabela Rusu et al.   JOURNAL OF STRUCTURAL BIOLOGY

Using Sculptor and Situs for simultaneous assembly of atomic components into low-resolution shapes

(2010) Stefan Birmanns et al.   JOURNAL OF STRUCTURAL BIOLOGY

Short Exposure to the DNA Intercalator DRAQ5 Dislocates the Transcription Machinery and Induces Cell Death

(2010) Elodie Richard et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Global Chromatin Architecture Reflects Pluripotency and Lineage Commitment in the Early Mouse Embryo

(2010) Kashif Ahmed et al.   PLoS One

Condensed Mitotic Chromosome Structure at Nanometer Resolution Using PALM and EGFP- Histones

(2010) Atsushi Matsuda et al.   PLoS One

Chromatin Higher-order Structure and Dynamics

(2010) C. L. Woodcock et al.   Cold Spring Harbor Perspectives in Biology

Dense chromatin plates in metaphase chromosomes

(2009) Isaac Gállego et al.   EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS

Interaction of a DNA intercalator DRAQ5, and a minor groove binder SYTO17, with chromatin in live cells-Influence on chromatin organization and histone-DNA interactions

(2008) Krzysztof Wojcik et al.   CYTOMETRY PART A

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

(2008) Lars Guelen et al.   NATURE

Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ

(2008) M. Eltsov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Subdiffraction Multicolor Imaging of the Nuclear Periphery with 3D Structured Illumination Microscopy

(2008) L. Schermelleh et al.   SCIENCE