Full-Length Transcript Sequencing and Comparative Transcriptomic Analysis of Paeonia lactiflora Reveals Tissue- and Ecotype-Specific Expression of Paeoniflorin Biosynthesis-Related Genes

Paeoniflorin in Paeoniaceae: Distribution, influencing factors, and biosynthesis

(2022) Xiao-Xiao Zhang et al.   Frontiers in Plant Science

Comparative transcriptomics characterized the distinct biosynthetic abilities of terpenoid and paeoniflorin biosynthesis in herbaceous peony strains

(2020) Baowei Lu et al.   PeerJ

Characterization and Analysis of the Full-Length Transcriptomes of Multiple Organs in Pseudotaxus chienii (W.C.Cheng) W.C.Cheng

(2020) Li Liu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Efficacy, Chemical Constituents, and Pharmacological Actions of Radix Paeoniae Rubra and Radix Paeoniae Alba

(2020) Yu-Qing Tan et al.   Frontiers in Pharmacology

Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity tolerance in the roots of cultivated alfalfa (Medicago sativa L.)

(2019) Dong Luo et al.   BMC PLANT BIOLOGY

Hybrid sequencing reveals insight into heat sensing and signaling of bread wheat

(2019) Xiaoming Wang et al.   PLANT JOURNAL

Medically Useful Plant Terpenoids: Biosynthesis, Occurrence, and Mechanism of Action

(2019) Matthew E. Bergman et al.   MOLECULES

Diverse transcription factors control monoterpene synthase expression in lavender (Lavandula)

(2019) Lukman S. Sarker et al.   PLANTA

Anti-inflammatory and immunoregulatory effects of paeoniflorin and total glucosides of paeony

(2019) Lingling Zhang et al.   PHARMACOLOGY & THERAPEUTICS

New insights into Paeoniaceae used as medicinal plants in China

(2019) Xiaoxiao Zhang et al.   Scientific Reports

OUP accepted manuscript

(2018)   JOURNAL OF EXPERIMENTAL BOTANY

The developmental dynamics of the Populus stem transcriptome

(2018) Qing Chao et al.   PLANT BIOTECHNOLOGY JOURNAL

Isoform Sequencing and State-of-Art Applications for Unravelling Complexity of Plant Transcriptomes

(2018) Dong An et al.   Genes

Comparative transcriptome analysis to identify putative genes involved in thymol biosynthesis pathway in medicinal plant Trachyspermum ammi L.

(2018) Mehdi Soltani Howyzeh et al.   Scientific Reports

The Pfam protein families database in 2019

(2018) Sara El-Gebali et al.   NUCLEIC ACIDS RESEARCH

Metabolic dynamics and physiological adaptation of Panax ginseng during development

(2017) Yu-Jin Kim et al.   PLANT CELL REPORTS

iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases

(2016) Yi Zheng et al.   Molecular Plant

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

(2016) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

A survey of the sorghum transcriptome using single-molecule long reads

(2016) Salah E. Abdel-Ghany et al.   Nature Communications

Learning from Co-expression Networks: Possibilities and Challenges

(2016) Elise A. R. Serin et al.   Frontiers in Plant Science

Molecular Cloning and Characterization of DXS and DXR Genes in the Terpenoid Biosynthetic Pathway of Tripterygium wilfordii

(2015) Yuru Tong et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Differences in the Chemical Profiles and Biological Activities ofPaeonia lactifloraandPaeonia obovata

(2015) Ji-Yeong Bae et al.   JOURNAL OF MEDICINAL FOOD

Cytochrome P450 promiscuity leads to a bifurcating biosynthetic pathway for tanshinones

(2015) Juan Guo et al.   NEW PHYTOLOGIST

Potential applications of glucosyltransferases in terpene glucoside production: impacts on the use of aroma and fragrance

(2014) Wilfried Schwab et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genetic and Component Content Differentiation between Wild and Cultivated Populations of Paeonia lactiflora and Related Species Used as Chishao and Baishao in China

(2014) Qiuling Wang et al.   BIOLOGICAL & PHARMACEUTICAL BULLETIN

A UDP-Glucose:Monoterpenol Glucosyltransferase Adds to the Chemical Diversity of the Grapevine Metabolome

(2014) F. Bonisch et al.   PLANT PHYSIOLOGY

Activity-Based Profiling of a Physiologic Aglycone Library Reveals Sugar Acceptor Promiscuity of Family 1 UDP-Glucosyltransferases from Grape

(2014) Friedericke Bönisch et al.   PLANT PHYSIOLOGY

Functional Diversity of Genes for the Biosynthesis of Paeoniflorin and Its Derivatives in Paeonia

(2013) Yuan Yuan et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The profiling and identification of the absorbed constituents and metabolites of Paeoniae Radix Rubra decoction in rat plasma and urine by the HPLC–DAD–ESI-IT-TOF-MSn technique: A novel strategy for the systematic screening and identification of absorbed constituents and metabolites from traditional Chinese medicines

(2013) Jing Liang et al.   JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS

Assessment of transcript reconstruction methods for RNA-seq

(2013) Tamara Steijger et al.   NATURE METHODS

Cytochrome P450-enzymes involved in the biosynthesis of mono- and sesquiterpenes

(2013) Corinna Weitzel et al.   PHYTOCHEMISTRY REVIEWS

Genome-wide identification and characterization of novel genes involved in terpenoid biosynthesis in Salvia miltiorrhiza

(2012) Yimian Ma et al.   JOURNAL OF EXPERIMENTAL BOTANY

Metabolic engineering of plant monoterpenes, sesquiterpenes and diterpenes-current status and future opportunities

(2012) B. Markus Lange et al.   PLANT BIOTECHNOLOGY JOURNAL

Two distinct pathways for essential metabolic precursors for isoprenoid biosynthesis

(2012) Tomohisa KUZUYAMA et al.   PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Profiling of the charged metabolites of traditional herbal medicines using capillary electrophoresis time-of-flight mass spectrometry

(2011) Keiko Iino et al.   Metabolomics

The family of terpene synthases in plants: a mid-size family of genes for specialized metabolism that is highly diversified throughout the kingdom

(2011) Feng Chen et al.   PLANT JOURNAL

A raison d’être for two distinct pathways in the early steps of plant isoprenoid biosynthesis?

(2011) Andréa Hemmerlin et al.   PROGRESS IN LIPID RESEARCH

Anti-Inflammatory and Immunomodulatory Effects of Paeonia Lactiflora Pall., a Traditional Chinese Herbal Medicine

(2011) Dong-Yi He et al.   Frontiers in Pharmacology

Bioactivity-Guided Isolation of 1,2,3,4,6-Penta-O-galloyl-d-glucopyranose fromPaeonia lactifloraRoots As a PTP1B Inhibitor

(2010) Renate R. Baumgartner et al.   JOURNAL OF NATURAL PRODUCTS

A candidate cDNA clone for (−)-limonene-7-hydroxylase from Perilla frutescens

(2010) Christopher J.D. Mau et al.   PHYTOCHEMISTRY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Chemical profiling of Radix Paeoniae evaluated by ultra-performance liquid chromatography/photo-diode-array/quadrupole time-of-flight mass spectrometry

(2008) Song-Lin Li et al.   JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS

New monoterpene glycosides from Paeonia lactiflora

(2007) Alessandra Braca et al.   FITOTERAPIA