Comparative genomics for Agmasoma sp. (Microsporidia) parasitising invasive Carcinus aestuarii and Carcinus maenas in Argentina

Microsporidia: a new taxonomic, evolutionary, and ecological synthesis

(2022) Jamie Bojko et al.   TRENDS IN PARASITOLOGY

Symbionts of invasive and native crabs, in Argentina: The most recently invaded area on the Southwestern Atlantic coastline

(2021) Antonella Frizzera et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Generation of a Microsporidia Species Attribute Database and Analysis of the Extensive Ecological and Phenotypic Diversity of Microsporidia

(2021) Brandon M. Murareanu et al.   mBio

Invasive Non-Native Crustacean Symbionts: Diversity and Impact

(2020) Jamie Bojko et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Decay of the glycolytic pathway and adaptation to intranuclear parasitism within Enterocytozoonidae microsporidia

(2017) Dominic Wiredu Boakye et al.   ENVIRONMENTAL MICROBIOLOGY

Parahepatospora carcini n. gen., n. sp., a parasite of invasive Carcinus maenas with intermediate features of sporogony between the Enterocytozoon clade and other microsporidia

(2017) Jamie Bojko et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Pathogens of Dikerogammarus haemobaphes regulate host activity and survival, but also threaten native amphipod populations in the UK

(2017) J Bojko et al.   DISEASES OF AQUATIC ORGANISMS

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

metaxa2: improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data

(2015) Johan Bengtsson-Palme et al.   Molecular Ecology Resources

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Plastic parasites: Extreme dimorphism creates a taxonomic conundrum in the phylum Microsporidia

(2012) G.D. Stentiford et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Genomic Survey of the Non-Cultivatable Opportunistic Human Pathogen, Enterocytozoon bieneusi

(2009) Donna E. Akiyoshi et al.   PLoS Pathogens