Investigating the diversification of holocentromeric satellite DNA Tyba in Rhynchospora (Cyperaceae)
出版年份 2023 全文链接
标题
Investigating the diversification of holocentromeric satellite DNA Tyba in Rhynchospora (Cyperaceae)
作者
关键词
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出版物
ANNALS OF BOTANY
Volume 131, Issue 5, Pages 813-825
出版商
Oxford University Press (OUP)
发表日期
2023-02-23
DOI
10.1093/aob/mcad036
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Satellitome comparison of two oedipodine grasshoppers highlights the contingent nature of satellite DNA evolution
- (2022) Juan Pedro M. Camacho et al. BMC BIOLOGY
- Repeat-based holocentromeres influence genome architecture and karyotype evolution
- (2022) Paulo G. Hofstatter et al. CELL
- The evolutionary history of sedges (Cyperaceae) in Madagascar
- (2021) Isabel Larridon et al. JOURNAL OF BIOGEOGRAPHY
- Evolution of Tandem Repeats Is Mirroring Post-polyploid Cladogenesis in Heliophila (Brassicaceae)
- (2021) Mert Dogan et al. Frontiers in Plant Science
- Redefining Rhynchospora section Tenues (Cyperaceae), a phylogenetic approach
- (2021) Pedro J S Silva Filho et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- Repetitive DNA: genomic dark matter matters
- (2021) Neil J. Gemmell NATURE REVIEWS GENETICS
- Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA
- (2021) Lucas Costa et al. ANNALS OF BOTANY
- Satellitome Analysis of the Pacific Oyster Crassostrea gigas Reveals New Pattern of Satellite DNA Organization, Highly Scattered across the Genome
- (2021) Monika Tunjić-Cvitanić et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- High-Throughput Genomic Data Reveal Complex Phylogenetic Relationships in Stylosanthes Sw (Leguminosae)
- (2021) Maria Alice Silva Oliveira et al. Frontiers in Genetics
- What makes a centromere?
- (2020) Paul B. Talbert et al. EXPERIMENTAL CELL RESEARCH
- Two new species of Rhynchospora (Cyperaceae) from Bahia, Brazil, and new combinations in Rhynchospora section Pleurostachys
- (2020) William Wayt Thomas BRITTONIA
- The epigenetic regulation of centromeres and telomeres in plants and animals
- (2020) Magdalena Achrem et al. Comparative Cytogenetics
- Dark Matter of Primate Genomes: Satellite DNA Repeats and Their Evolutionary Dynamics
- (2020) Syed Farhan Ahmad et al. Cells
- Natural History of a Satellite DNA Family: From the Ancestral Genome Component to Species-Specific Sequences, Concerted and Non-Concerted Evolution
- (2019) Alexander Belyayev et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Conservation, divergence and functions of centromeric satellite DNA families in the Bovidae
- (2019) A Escudeiro et al. Genome Biology and Evolution
- Satellite DNA evolution: old ideas, new approaches
- (2018) Sarah Sander Lower et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads
- (2017) Petr Novák et al. NUCLEIC ACIDS RESEARCH
- Concerted evolution, a slow process for ant satellite DNA: study of the satellite DNA in the Aphaenogaster genus (Hymenoptera, Formicidae)
- (2017) P. Lorite et al. ORGANISMS DIVERSITY & EVOLUTION
- Are holocentrics doomed to change? Limited chromosome number variation in Rhynchospora Vahl (Cyperaceae)
- (2017) Tiago Ribeiro et al. PROTOPLASMA
- Satellite DNA: An Evolving Topic
- (2017) Manuel Garrido-Ramos Genes
- Centromeric and non-centromeric satellite DNA organisation differs in holocentric Rhynchospora species
- (2016) Tiago Ribeiro et al. CHROMOSOMA
- Holocentromere identity: from the typical mitotic linear structure to the great plasticity of meiotic holocentromeres
- (2016) André Marques et al. CHROMOSOMA
- Restructuring of Holocentric Centromeres During Meiosis in the Plant Rhynchospora pubera
- (2016) A. Marques et al. GENETICS
- Developmental programmed cell death during asymmetric microsporogenesis in holocentric species ofRhynchospora(Cyperaceae)
- (2016) Danilo M. Rocha et al. JOURNAL OF EXPERIMENTAL BOTANY
- An assembly and alignment-free method of phylogeny reconstruction from next-generation sequencing data
- (2015) Huan Fan et al. BMC GENOMICS
- Satellite DNA in Plants: More than Just Rubbish
- (2015) Manuel A. Garrido-Ramos CYTOGENETIC AND GENOME RESEARCH
- A novel satellite DNA isolated in Pecten jacobaeus shows high sequence similarity among molluscs
- (2015) Agnese Petraccioli et al. MOLECULAR GENETICS AND GENOMICS
- Holocentromeres inRhynchosporaare associated with genome-wide centromere-specific repeat arrays interspersed among euchromatin
- (2015) André Marques et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Challenges of Resolving a Rapid, Recent Radiation: Empirical and Simulated Phylogenomics of Philippine Shrews
- (2015) Thomas C. Giarla et al. SYSTEMATIC BIOLOGY
- Centromere identity from the DNA point of view
- (2014) Miroslav Plohl et al. CHROMOSOMA
- Satellite-DNA diversification and the evolution of major lineages in Cardueae (Carduoideae Asteraceae)
- (2014) María Ester Quesada del Bosque et al. JOURNAL OF PLANT RESEARCH
- Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres
- (2014) H. Zhang et al. PLANT CELL
- Differential spreading of HinfI satellite DNA variants during radiation in Centaureinae
- (2013) María Ester Quesada del Bosque et al. ANNALS OF BOTANY
- RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads
- (2013) P. Novak et al. BIOINFORMATICS
- A Satellite Explosion in the Genome of Holocentric Nematodes
- (2013) Juan A. Subirana et al. PLoS One
- Molecular Characterization and Chromosomal Distribution of a Species-Specific Transcribed Centromeric Satellite Repeat from the Olive Fruit Fly, Bactrocera oleae
- (2013) Konstantina T. Tsoumani et al. PLoS One
- Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution
- (2013) Daniël P Melters et al. GENOME BIOLOGY
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- New chromosome counts in Brazilian species of Rhynchospora (Cyperaceae)
- (2012) Edihanne G. Arguelho et al. CARYOLOGIA
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution
- (2012) Z. Gong et al. PLANT CELL
- Analysis of nucleosome positioning determined by DNA helix curvature in the human genome
- (2011) Hongde Liu et al. BMC GENOMICS
- Holocentric Chromosomes of Luzula elegans Are Characterized by a Longitudinal Centromere Groove, Chromosome Bending, and a Terminal Nucleolus Organizer Region
- (2011) S. Heckmann et al. CYTOGENETIC AND GENOME RESEARCH
- A satellite DNA evolutionary analysis in the North American endemic dioecious plant Rumex hastatulus (Polygonaceae)
- (2011) M.E. Quesada del Bosque et al. GENOME
- The 1.688 Repetitive DNA of Drosophila: Concerted Evolution at Different Genomic Scales and Association with Genes
- (2011) Gustavo C. S. Kuhn et al. MOLECULAR BIOLOGY AND EVOLUTION
- Concerted evolution of satellite DNA in Sarcocapnos: a matter of time
- (2011) Miguel A. Pérez-Gutiérrez et al. PLANT MOLECULAR BIOLOGY
- phytools: an R package for phylogenetic comparative biology (and other things)
- (2011) Liam J. Revell Methods in Ecology and Evolution
- Long-term conservation vs high sequence divergence: the case of an extraordinarily old satellite DNA in bivalve mollusks
- (2009) M Plohl et al. HEREDITY
- Effect of location, organization, and repeat-copy number in satellite-DNA evolution
- (2009) R. Navajas-Pérez et al. MOLECULAR GENETICS AND GENOMICS
- Characteristics of Nucleosome Core DNA and Their Applications in Predicting Nucleosome Positions
- (2008) Hongde Liu et al. BIOPHYSICAL JOURNAL
- New Analytic Results for Speciation Times in Neutral Models
- (2008) Tanja Gernhard BULLETIN OF MATHEMATICAL BIOLOGY
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