New bioinformatic tool for quick identification of functionally relevant endogenous retroviral inserts in human genome

Interplay of TRIM28 and DNA methylation in controlling human endogenous retroelements

(2014) Priscilla Turelli et al.   GENOME RESEARCH

Endogenous Retroviruses and the Development of Cancer

(2014) G. Kassiotis   JOURNAL OF IMMUNOLOGY

Transcriptional Derepression of the ERVWE1 Locus following Influenza A Virus Infection

(2014) F. Li et al.   JOURNAL OF VIROLOGY

Ectopic DNMT3L Triggers Assembly of a Repressive Complex for Retroviral Silencing in Somatic Cells

(2014) T.-H. Kao et al.   JOURNAL OF VIROLOGY

The enemy within: endogenous retroelements and autoimmune disease

(2014) Hannah E Volkman et al.   NATURE IMMUNOLOGY

Endogenous retrovirus induces leukemia in a xenograft mouse model for primary myelofibrosis

(2014) I. Triviai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamic regulation of human endogenous retroviruses mediates factor-induced reprogramming and differentiation potential

(2014) M. Ohnuki et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The distribution of insertionally polymorphic endogenous retroviruses in breast cancer patients and cancer-free controls

(2014) Julia H Wildschutte et al.   Retrovirology

Asynchronous transcriptional silencing of individual retroviral genomes in embryonic cells

(2014) Sharon Schlesinger et al.   Retrovirology

A Genome-Wide Analysis of Open Chromatin in Human Epididymis Epithelial Cells Reveals Candidate Regulatory Elements for Genes Coordinating Epididymal Function1

(2013) Jared M. Bischof et al.   BIOLOGY OF REPRODUCTION

Genome-Wide Analysis of Chromatin States Reveals Distinct Mechanisms of Sex-Dependent Gene Regulation in Male and Female Mouse Liver

(2013) A. Sugathan et al.   MOLECULAR AND CELLULAR BIOLOGY

Endogenous retroviruses function as species-specific enhancer elements in the placenta

(2013) Edward B Chuong et al.   NATURE GENETICS

Visualized Computational Predictions of Transcriptional Effects by Intronic Endogenous Retroviruses

(2013) Ying Zhang et al.   PLoS One

Expression of Human Endogenous Retrovirus-W Including Syncytin-1 in Cutaneous T-Cell Lymphoma

(2013) Pilvi Maliniemi et al.   PLoS One

Human-specific endogenous retroviral insert serves as an enhancer for the schizophrenia-linked gene PRODH

(2013) M. Suntsova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of late assembly domains of the human endogenous retrovirus-K(HML-2)

(2013) Claudia Chudak et al.   Retrovirology

Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA

(2013) Wei Shao et al.   Retrovirology

Human endogenous retrovirus K (HML-2) RNA and protein expression is a marker for human embryonic and induced pluripotent stem cells

(2013) Nina V Fuchs et al.   Retrovirology

Endogenous retroviruses: acquisition, amplification and taming of genome invaders

(2013) Marie Dewannieux et al.   Current Opinion in Virology

The Majority of Primate-Specific Regulatory Sequences Are Derived from Transposable Elements

(2013) Pierre-Étienne Jacques et al.   PLoS Genetics

DUX4 Binding to Retroelements Creates Promoters That Are Active in FSHD Muscle and Testis

(2013) Janet M. Young et al.   PLoS Genetics

Epigenetics in radiation biology: a new research frontier

(2013) Matt Merrifield et al.   Frontiers in Genetics

HERV-K(HML-2), the Best Preserved Family of HERVs: Endogenization, Expression, and Implications in Health and Disease

(2013) Oliver Hohn et al.   Frontiers in Oncology

Site-Specific Silencing of Regulatory Elements as a Mechanism of X Inactivation

(2012) J. Mauro Calabrese et al.   CELL

nMETR: Technique for facile recovery of hypomethylation genomic tags

(2012) Konstantin Baskaev et al.   GENE

Localized DNA cleavage secondary to genotoxic exposure adjacent to an Alu inverted repeat

(2012) Bay Ho et al.   GENES CHROMOSOMES & CANCER

Genomic impact, chromosomal distribution and transcriptional regulation of HERV elements

(2012) Heui-Soo Kim   MOLECULES AND CELLS

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Dfam: a database of repetitive DNA based on profile hidden Markov models

(2012) Travis J. Wheeler et al.   NUCLEIC ACIDS RESEARCH

HERV-E-Mediated Modulation of PLA2G4A Transcription in Urothelial Carcinoma

(2012) Darko Gosenca et al.   PLoS One

Non-targeted radiation effects—An epigenetic connection

(2011) Yaroslav Ilnytskyy et al.   MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS

DNaseI Hypersensitivity and Ultraconservation Reveal Novel, Interdependent Long-Range Enhancers at the Complex Pax6 Cis-Regulatory Region

(2011) David J. McBride et al.   PLoS One

Identification, characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses

(2011) Ravi P Subramanian et al.   Retrovirology

Novel strong tissue specific promoter for gene expression in human germ cells

(2010) Denis Kuzmin et al.   BMC BIOTECHNOLOGY

The next-generation sequencing technology and application

(2010) Xiaoguang Zhou et al.   Protein & Cell

Retroelements and their impact on genome evolution and functioning

(2009) Elena Gogvadze et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Beneficial and detrimental effects of human endogenous retroviruses

(2009) Reinhard Kurth et al.   INTERNATIONAL JOURNAL OF CANCER