Genomic characterization and assessment of pathogenic potential of Legionella spp. isolates from environmental monitoring
出版年份 2023 全文链接
标题
Genomic characterization and assessment of pathogenic potential of Legionella spp. isolates from environmental monitoring
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 13, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2023-01-12
DOI
10.3389/fmicb.2022.1091964
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Rapid Detection and Differentiation of Legionella pneumophila and Non-Legionella pneumophila Species by Using Recombinase Polymerase Amplification Combined With EuNPs-Based Lateral Flow Immunochromatography
- (2022) Jungang Du et al. Frontiers in Chemistry
- The Use of Culture, Molecular Methods and Whole Genome Sequencing to Detect the Source of an Outbreak of Legionnaire's Disease in New York State
- (2022) D. Wroblewski et al. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
- Genome analysis of Legionella pneumophila ST23 from various countries reveals highly similar strains
- (2022) Maria Luisa Ricci et al. Life Science Alliance
- Evaluation of MALDI–TOF Mass Spectrometry in Diagnostic and Environmental Surveillance of Legionella Species: A Comparison With Culture and Mip-Gene Sequencing Technique
- (2021) Maria Rosaria Pascale et al. Frontiers in Microbiology
- Legionellosis Caused by Non-Legionella pneumophila Species, with a Focus on Legionella longbeachae
- (2021) Stephen T. Chambers et al. Microorganisms
- Comparison of Updated Methods for Legionella Detection in Environmental Water Samples
- (2021) Daniela Toplitsch et al. International Journal of Environmental Research and Public Health
- Occurrence of Legionella spp. in Man-Made Water Sources: Isolates Distribution and Phylogenetic Characterization in the Emilia-Romagna Region
- (2021) Marta Mazzotta et al. Pathogens
- Whole genome sequencing reveals the genomic diversity, taxonomic classification, and evolutionary relationships of the genus Nocardia
- (2021) Shuai Xu et al. PLoS Neglected Tropical Diseases
- TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes
- (2021) Jan P Meier-Kolthoff et al. NUCLEIC ACIDS RESEARCH
- Combinatorial selection in amoebal hosts drives the evolution of the human pathogen Legionella pneumophila
- (2020) Jason M. Park et al. Nature Microbiology
- A Snapshot of the Prevalence and Molecular Diversity of Legionella pneumophila in the Water Systems of Israeli Hotels
- (2020) Eugenia Yakunin et al. Pathogens
- High-throughput proteotyping of bacterial isolates by double barrel chromatography-tandem mass spectrometry based on microplate paramagnetic beads and phylopeptidomics
- (2020) Karim Hayoun et al. Journal of Proteomics
- WGS-Based Prediction and Analysis of Antimicrobial Resistance in Campylobacter jejuni Isolates From Israel
- (2020) Assaf Rokney et al. Frontiers in Cellular and Infection Microbiology
- Susceptibility of Legionella pneumophila to antimicrobial agents and the presence of the efflux pump LpeAB
- (2019) Olav Bjarte Natås et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Air-conditioner cooling towers as complex reservoirs and continuous source of Legionella pneumophila infection evidenced by a genomic analysis study in 2017, Switzerland
- (2019) Daniel Wüthrich et al. Eurosurveillance
- Fish photobacteriosis-The importance of rapid and accurate identification of Photobacterium damselae subsp. piscicida
- (2019) Snježana Pečur Kazazić et al. JOURNAL OF FISH DISEASES
- Intracellular parasitism, the driving force of evolution of Legionella pneumophila and the genus Legionella
- (2019) Laure Gomez-Valero et al. MICROBES AND INFECTION
- Antibiotic Resistance and Azithromycin Resistance Mechanism of Legionella pneumophila Serogroup 1 in China
- (2019) Xueyang Jia et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Legionnaires’ Disease: State of the Art Knowledge of Pathogenesis Mechanisms of Legionella
- (2019) Sonia Mondino et al. Annual Review of Pathology-Mechanisms of Disease
- Corynebacterium sanguinis sp. nov., a clinical and environmental associated corynebacterium
- (2019) Daniel Jaén-Luchoro et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- NanoPack: visualizing and processing long-read sequencing data
- (2018) Wouter De Coster et al. BIOINFORMATICS
- OUP accepted manuscript
- (2018) BIOINFORMATICS
- Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies
- (2018) Natalia A. Kozak-Muiznieks et al. INFECTION GENETICS AND EVOLUTION
- Accuracy of different bioinformatics methods in detecting antibiotic resistance and virulence factors from Staphylococcus aureus whole genome sequences.
- (2018) Amy Mason et al. JOURNAL OF CLINICAL MICROBIOLOGY
- KBase: The United States Department of Energy Systems Biology Knowledgebase
- (2018) Adam P Arkin et al. NATURE BIOTECHNOLOGY
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
- (2018) Enis Afgan et al. NUCLEIC ACIDS RESEARCH
- Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1
- (2018) Jeffrey W. Mercante et al. PLoS One
- From Theory to Practice: Translating Whole-Genome Sequencing (WGS) into the Clinic
- (2018) Francois Balloux et al. TRENDS IN MICROBIOLOGY
- Macrolide resistance inLegionella pneumophila: the role of LpeAB efflux pump
- (2017) Clémence Massip et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
- (2017) Ryan R. Wick et al. PLoS Computational Biology
- MultiQC: summarize analysis results for multiple tools and samples in a single report
- (2016) Philip Ewels et al. BIOINFORMATICS
- Existence and control of Legionella bacteria in building water systems: A review
- (2016) John P. Springston et al. JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HYGIENE
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genomic analysis of 38 Legionella species identifies large and diverse effector repertoires
- (2016) David Burstein et al. NATURE GENETICS
- CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
- (2016) Baofeng Jia et al. NUCLEIC ACIDS RESEARCH
- Population structure and minimum core genome typing of Legionella pneumophila
- (2016) Tian Qin et al. Scientific Reports
- First Case of Legionnaire's Disease Caused by Legionella anisa in Spain and the Limitations on the Diagnosis of Legionella non-pneumophila Infections
- (2016) Lucianna Vaccaro et al. PLoS One
- BPGA- an ultra-fast pan-genome analysis pipeline
- (2016) Narendrakumar M. Chaudhari et al. Scientific Reports
- JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
- (2015) Michael Richter et al. BIOINFORMATICS
- kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome: Table 1
- (2015) Shea N Gardner et al. BIOINFORMATICS
- Current and Emerging Legionella Diagnostics for Laboratory and Outbreak Investigations
- (2015) Jeffrey W. Mercante et al. CLINICAL MICROBIOLOGY REVIEWS
- Legionella detection and subgrouping in water air-conditioning cooling tower systems in Kuwait
- (2015) Qadreyah Al-Matawah et al. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- VFDB 2016: hierarchical and refined dataset for big data analysis—10 years on
- (2015) Lihong Chen et al. NUCLEIC ACIDS RESEARCH
- Mistaken identity:Legionella micdadeiappearing as acid-fast bacilli on lung biopsy of a hematopoietic stem cell transplant patient
- (2015) P.R. Waldron et al. Transplant Infectious Disease
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea
- (2014) J. Chun et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Epidemiology and clinical management of Legionnaires' disease
- (2014) Nick Phin et al. LANCET INFECTIOUS DISEASES
- QUAST: quality assessment tool for genome assemblies
- (2013) Alexey Gurevich et al. BIOINFORMATICS
- LPSN—list of prokaryotic names with standing in nomenclature
- (2013) Aidan C. Parte NUCLEIC ACIDS RESEARCH
- A pilot study of rapid whole-genome sequencing for the investigation of aLegionellaoutbreak
- (2013) Sandra Reuter et al. BMJ Open
- Genome Dynamics in Legionella: The Basis of Versatility and Adaptation to Intracellular Replication
- (2013) L. Gomez-Valero et al. Cold Spring Harbor Perspectives in Medicine
- Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain
- (2012) K. A. Jolley et al. MICROBIOLOGY-SGM
- Java bioinformatics analysis web services for multiple sequence alignment--JABAWS:MSA
- (2011) P. V. Troshin et al. BIOINFORMATICS
- Extensive recombination events and horizontal gene transfer shaped the Legionella pneumophila genomes
- (2011) Laura Gomez-Valero et al. BMC GENOMICS
- Sessile Legionella pneumophila is able to grow on surfaces and generate structured monospecies biofilms
- (2010) S. Pécastaings et al. BIOFOULING
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Structure of the Antibiotic Resistance Factor Spectinomycin Phosphotransferase fromLegionella pneumophila
- (2010) Desiree H. Fong et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Legionella feeleii Serotype 2 Pneumonia in a Man with Chronic Lymphocytic Leukemia: a Challenging Diagnosis
- (2010) M. O. Siegel et al. JOURNAL OF CLINICAL MICROBIOLOGY
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- Notes on the characterization of prokaryote strains for taxonomic purposes
- (2009) B. J. Tindall et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Mutational paths towards increased fluoroquinolone resistance in Legionella pneumophila
- (2009) I. Almahmoud et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
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