RNA-binding protein MAC5A interacts with the 26S proteasome to regulate DNA damage response in Arabidopsis

Crosstalk between Long Non Coding RNAs, microRNAs and DNA Damage Repair in Prostate Cancer: New Therapeutic Opportunities?

(2022) Folake Orafidiya et al.   Cancers

The ATR-WEE1 kinase module inhibits the MAC complex to regulate replication stress response

(2021) Lili Wang et al.   NUCLEIC ACIDS RESEARCH

SIZ1 negatively regulates aluminum resistance by mediating the STOP1‐ALMT1 pathway in Arabidopsis

(2021) Jiameng Xu et al.   Journal of Integrative Plant Biology

RBM6 splicing factor promotes homologous recombination repair of double-strand breaks and modulates sensitivity to chemotherapeutic drugs

(2021) Feras E Machour et al.   NUCLEIC ACIDS RESEARCH

The roles of RNA in DNA double-strand break repair

(2020) Aldo S. Bader et al.   BRITISH JOURNAL OF CANCER

An insight into the mechanism of DNA damage response in plants- role of SUPPRESSOR OF GAMMA RESPONSE 1: An overview

(2020) Kalyan Mahapatra et al.   MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS

Intrinsically disordered protein RBM14 plays a role in generation of RNA:DNA hybrids at double-strand break sites

(2020) Yumi Jang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alternative Splicing and DNA Damage Response in Plants

(2020) Barbara Anna Nimeth et al.   Frontiers in Plant Science

ATM suppresses leaf senescence triggered by DNA double‐strand break through epigenetic control of senescence‐associated genes in Arabidopsis

(2020) Zhonghai Li et al.   NEW PHYTOLOGIST

MAC5, an RNA-binding protein, protects pri-miRNAs from SERRATE-dependent exoribonuclease activities

(2020) Shengjun Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Depletion of the RNA binding protein HNRNPD impairs homologous recombination by inhibiting DNA-end resection and inducing R-loop accumulation

(2019) Luigi Alfano et al.   NUCLEIC ACIDS RESEARCH

The Plant DNA Damage Response: Signaling Pathways Leading to Growth Inhibition and Putative Role in Response to Stress Conditions

(2019) Maher-Un Nisa et al.   Frontiers in Plant Science

Nuclear Localized O-Fucosyltransferase SPY Facilitates PRR5 Proteolysis to Fine-Tune the Pace of Arabidopsis Circadian Clock

(2019) Yan Wang et al.   Molecular Plant

MAC3A and MAC3B, Two Core Subunits of the MOS4-Associated Complex, Positively Influence miRNA Biogenesis

(2018) Shengjun Li et al.   PLANT CELL

AtMMS21: Connecting DNA Repair and Root Development

(2018) Jianbin Lai et al.   TRENDS IN PLANT SCIENCE

The Cell Cycle Checkpoint Regulator ATR Is Required for Internal Aluminum Toxicity-Mediated Root Growth Inhibition in Arabidopsis

(2018) Yang Zhang et al.   Frontiers in Plant Science

The β5 subunit is essential for intact 26S proteasome assembly to specifically promote plant autotrophic growth under salt stress

(2018) Jia-Jia Han et al.   NEW PHYTOLOGIST

SOG 1‐dependent NAC 103 modulates the DNA damage response as a transcriptional regulator in Arabidopsis

(2018) Tae Ho Ryu et al.   PLANT JOURNAL

SOG1 activator and MYB3R repressors regulate a complex DNA damage network in Arabidopsis

(2018) Clara Bourbousse et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proteasomal degradation of BRAHMA promotes Boron tolerance in Arabidopsis

(2018) Takuya Sakamoto et al.   Nature Communications

A SUMO ligase AtMMS21 regulates activity of the 26S proteasome in root development

(2018) Mengyuan Yu et al.   PLANT SCIENCE

IDN2 Interacts with RPA and Facilitates DNA Double-Strand Break Repair by Homologous Recombination in Arabidopsis

(2017) Mingming Liu et al.   PLANT CELL

The Arabidopsis MOS4-Associated Complex Promotes MicroRNA Biogenesis and Precursor Messenger RNA Splicing

(2017) Tianran Jia et al.   PLANT CELL

A SUMO Ligase AtMMS21 Regulates the Stability of the Chromatin Remodeler BRAHMA in Root Development

(2017) Juanjuan Zhang et al.   PLANT PHYSIOLOGY

Small RNA-mediated repair of UV-induced DNA lesions by the DNA DAMAGE-BINDING PROTEIN 2 and ARGONAUTE 1

(2017) Catherine Schalk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Modification of DNA Checkpoints to Confer Aluminum Tolerance

(2017) Thomas Eekhout et al.   TRENDS IN PLANT SCIENCE

Mechanisms Used by Plants to Cope with DNA Damage

(2016) Zhubing Hu et al.   Annual Review of Plant Biology

The plant‐specific CDKB1‐CYCB1 complex mediates homologous recombination repair inArabidopsis

(2016) Annika K Weimer et al.   EMBO JOURNAL

Roles of RNA-Binding Proteins in DNA Damage Response

(2016) Mihoko Kai   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A DNA2 Homolog Is Required for DNA Damage Repair, Cell Cycle Regulation, and Meristem Maintenance in Plants

(2016) Ning Jia et al.   PLANT PHYSIOLOGY

Arabidopsis PROTEASOME REGULATOR1 is required for auxin-mediated suppression of proteasome activity and regulates auxin signalling

(2016) Bao-Jun Yang et al.   Nature Communications

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Aluminum-Dependent Terminal Differentiation of the Arabidopsis Root Tip Is Mediated through an ATR-, ALT2-, and SOG1-Regulated Transcriptional Response

(2015) Caroline A. Sjogren et al.   PLANT CELL

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

PRL1 modulates root stem cell niche activity and meristem size throughWOX5andPLTsin Arabidopsis

(2014) Hongtao Ji et al.   PLANT JOURNAL

rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data

(2014) Shihao Shen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA damage: RNA-binding proteins protect from near and far

(2014) Martin Dutertre et al.   TRENDS IN BIOCHEMICAL SCIENCES

Charity begins at home: non-coding RNA functions in DNA repair

(2013) Dipanjan Chowdhury et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

AtMMS21, an SMC5/6 Complex Subunit, Is Involved in Stem Cell Niche Maintenance and DNA Damage Responses in Arabidopsis Roots

(2013) P. Xu et al.   PLANT PHYSIOLOGY

CDC5, a DNA binding protein, positively regulates posttranscriptional processing and/or transcription of primary microRNA transcripts

(2013) S. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA Damage Sensing by the ATM and ATR Kinases

(2013) A. Marechal et al.   Cold Spring Harbor Perspectives in Biology

A Role for Small RNAs in DNA Double-Strand Break Repair

(2012) Wei Wei et al.   CELL

SUMO E3 Ligase AtMMS21 Regulates Drought Tolerance inArabidopsis thalianaF

(2012) Shengchun Zhang et al.   Journal of Integrative Plant Biology

Identification of novel transcripts in annotated genomes using RNA-Seq

(2011) A. Roberts et al.   BIOINFORMATICS

GMI1, a structural-maintenance-of-chromosomes-hinge domain-containing protein, is involved in somatic homologous recombination in Arabidopsis

(2011) Gudrun Böhmdorfer et al.   PLANT JOURNAL

Alkylation Base Damage Is Converted into Repairable Double-Strand Breaks and Complex Intermediates in G2 Cells Lacking AP Endonuclease

(2011) Wenjian Ma et al.   PLoS Genetics

The DNA Damage Response: Making It Safe to Play with Knives

(2010) Alberto Ciccia et al.   MOLECULAR CELL

Two Putative RNA-Binding Proteins Function with Unequal Genetic Redundancy in the MOS4-Associated Complex

(2010) J. Monaghan et al.   PLANT PHYSIOLOGY

MicroRNAs: new players in the DNA damage response

(2010) H. Hu et al.   Journal of Molecular Cell Biology

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

(2009) Gabriela Bindea et al.   BIOINFORMATICS

Molecular mechanisms of proteasome assembly

(2009) Shigeo Murata et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

SUMO E3 Ligase HIGH PLOIDY2 Regulates Endocycle Onset and Meristem Maintenance in Arabidopsis

(2009) T. Ishida et al.   PLANT CELL

Hypersensitivity to DNA damage in plant stem cell niches

(2009) N. Fulcher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage

(2009) K. Yoshiyama et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Two Prp19-Like U-Box Proteins in the MOS4-Associated Complex Play Redundant Roles in Plant Innate Immunity

(2009) Jacqueline Monaghan et al.   PLoS Pathogens

QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR

(2008) Samuel Arvidsson et al.   BMC BIOINFORMATICS

Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL/CIPK complexesin planta

(2008) Rainer Waadt et al.   PLANT JOURNAL

The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1

(2008) Z. Dong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA