Rumen Microbial Predictors for Short-Chain Fatty Acid Levels and the Grass-Fed Regimen in Angus Cattle

Stool and Ruminal Microbiome Components Associated With Methane Emission and Feed Efficiency in Nelore Beef Cattle

(2022) Bruno G. N. Andrade et al.   Frontiers in Genetics

Growth curve, blood parameters and carcass traits of grass-fed Angus steers

(2021) J.A. Carrillo et al.   Animal

Measured ammonia emissions from tropical and subtropical pastures: A comparison with 2006 IPCC, 2019 Refinement to the 2006 IPCC, and EMEP/EEA (European Monitoring and Evaluation Programme and European Environmental Agency) inventory estimates

(2020) Claudia Arndt et al.   JOURNAL OF DAIRY SCIENCE

PICRUSt2 for prediction of metagenome functions

(2020) Gavin M. Douglas et al.   NATURE BIOTECHNOLOGY

Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways

(2020) Michael Jakob Pichler et al.   Nature Communications

Analysis of compositions of microbiomes with bias correction

(2020) Huang Lin et al.   Nature Communications

Greenhouse gas balance and carbon footprint of pasture-based beef cattle production systems in the tropical region (Atlantic Forest biome)

(2020) P. P. A. Oliveira et al.   Animal

NetCoMi: network construction and comparison for microbiome data in R

(2020) Stefanie Peschel et al.   BRIEFINGS IN BIOINFORMATICS

Megasphaera elsdenii Lactate Degradation Pattern Shifts in Rumen Acidosis Models

(2019) Lianmin Chen et al.   Frontiers in Microbiology

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Microbial Networks in SPRING - Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data

(2019) Grace Yoon et al.   Frontiers in Genetics

A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions

(2019) R. John Wallace et al.   Science Advances

Changes in the gut microbiome and enzymatic profile of Tenebrio molitor larvae biodegrading cellulose, polyethylene and polystyrene waste

(2019) Sebastian W. Przemieniecki et al.   ENVIRONMENTAL POLLUTION

Lacipirellula parvula gen. nov., sp. nov., representing a lineage of planctomycetes widespread in low-oxygen habitats, description of the family Lacipirellulaceae fam. nov. and proposal of the orders Pirellulales ord. nov., Gemmatales ord. nov. and Isosphaerales ord. nov.

(2019) Svetlana N. Dedysh et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Nationwide shift to grass-fed beef requires larger cattle population

(2018) Matthew N Hayek et al.   Environmental Research Letters

Factors influencing ruminal bacterial community diversity and composition and microbial fibrolytic enzyme abundance in lactating dairy cows with a focus on the role of active dry yeast

(2017) Ousama AlZahal et al.   JOURNAL OF DAIRY SCIENCE

Acetate Dose-Dependently Stimulates Milk Fat Synthesis in Lactating Dairy Cows

(2017) Natalie L Urrutia et al.   JOURNAL OF NUTRITION

New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11

(2016) Lindsey M Solden et al.   ISME Journal

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Modulation of Fecal Clostridiales Bacteria and Butyrate by Probiotic Intervention with Lactobacillus paracasei DG Varies among Healthy Adults

(2014) Chiara Ferrario et al.   JOURNAL OF NUTRITION

Changes in the Rumen Epimural Bacterial Diversity of Beef Cattle as Affected by Diet and Induced Ruminal Acidosis

(2013) R. M. Petri et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools

(2011) Robert W. Li et al.   ENVIRONMENTAL MICROBIOLOGY

Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies

(2011) P. B. Pope et al.   SCIENCE

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Effect of Environmental Factors and Influence of Rumen and Hindgut Biogeography on Bacterial Communities in Steers

(2010) Gustavo A. Romero-Pérez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A review of fatty acid profiles and antioxidant content in grass-fed and grain-fed beef

(2010) Cynthia A Daley et al.   Nutrition Journal

Pyramidobacter piscolens gen. nov., sp. nov., a member of the phylum 'Synergistetes' isolated from the human oral cavity

(2009) J. Downes et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY